data_A1ITP # _chem_comp.id A1ITP _chem_comp.name "(1~{R})-~{N}-(3-chlorophenyl)-3-oxidanylidene-~{N}-[4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]-1,2-dihydroindene-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H21 Cl N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1R)-N-(3-chlorophenyl)-3-oxo-N-[4-(2-oxopyrrolidin-1-yl)phenyl]indane-1-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-08 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 444.910 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ITP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HC1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ITP N1 N1 N 0 1 N N N N N N -17.329 0.760 -0.717 0.219 -0.227 0.067 N1 A1ITP 1 A1ITP C4 C1 C 0 1 Y N N N N N -17.905 -0.783 3.034 3.297 2.504 -1.667 C4 A1ITP 2 A1ITP C5 C2 C 0 1 Y N N N N N -16.654 -0.356 2.579 3.357 1.705 -0.541 C5 A1ITP 3 A1ITP C6 C3 C 0 1 Y N N N N N -15.507 -0.963 3.047 4.248 2.015 0.486 C6 A1ITP 4 A1ITP C7 C4 C 0 1 N N R N N N -16.307 0.719 1.553 2.582 0.460 -0.181 C7 A1ITP 5 A1ITP C8 C5 C 0 1 N N N N N N -14.818 0.966 1.851 3.091 0.021 1.199 C8 A1ITP 6 A1ITP C10 C6 C 0 1 N N N N N N -16.462 0.176 0.140 1.109 0.769 -0.114 C10 A1ITP 7 A1ITP C13 C7 C 0 1 Y N N N N N -17.988 -0.821 -2.456 0.468 -2.122 1.546 C13 A1ITP 8 A1ITP C15 C8 C 0 1 Y N N N N N -17.305 -0.509 -4.730 1.563 -4.108 0.777 C15 A1ITP 9 A1ITP C17 C9 C 0 1 Y N N N N N -16.611 1.070 -3.066 1.313 -2.239 -0.702 C17 A1ITP 10 A1ITP C20 C10 C 0 1 Y N N N N N -20.325 3.584 -0.055 -3.871 0.580 -0.061 C20 A1ITP 11 A1ITP C21 C11 C 0 1 Y N N N N N -19.127 3.967 -0.608 -3.425 -0.730 0.046 C21 A1ITP 12 A1ITP C22 C12 C 0 1 Y N N N N N -18.109 3.040 -0.772 -2.071 -0.998 0.089 C22 A1ITP 13 A1ITP C24 C13 C 0 1 N N N N N N -23.247 5.688 0.790 -7.570 0.571 -0.038 C24 A1ITP 14 A1ITP C26 C14 C 0 1 N N N N N N -21.411 5.705 -0.790 -5.819 2.183 -0.333 C26 A1ITP 15 A1ITP C1 C15 C 0 1 Y N N N N N -15.530 -1.997 3.996 5.076 3.142 0.361 C1 A1ITP 16 A1ITP C2 C16 C 0 1 Y N N N N N -16.777 -2.386 4.457 5.003 3.930 -0.767 C2 A1ITP 17 A1ITP C3 C17 C 0 1 Y N N N N N -17.940 -1.820 3.955 4.116 3.613 -1.781 C3 A1ITP 18 A1ITP C9 C18 C 0 1 N N N N N N -14.341 -0.299 2.496 4.143 1.034 1.578 C9 A1ITP 19 A1ITP O1 O1 O 0 1 N N N N N N -13.181 -0.654 2.639 4.789 1.040 2.605 O1 A1ITP 20 A1ITP O2 O2 O 0 1 N N N N N N -15.921 -0.878 -0.212 0.723 1.914 -0.224 O2 A1ITP 21 A1ITP C11 C19 C 0 1 Y N N N N N -17.304 0.331 -2.108 0.668 -1.532 0.304 C11 A1ITP 22 A1ITP C12 C20 C 0 1 Y N N N N N -18.342 1.729 -0.433 -1.155 0.044 0.024 C12 A1ITP 23 A1ITP C14 C21 C 0 1 Y N N N N N -17.911 -1.279 -3.757 0.916 -3.407 1.779 C14 A1ITP 24 A1ITP C16 C22 C 0 1 Y N N N N N -16.615 0.622 -4.359 1.764 -3.524 -0.461 C16 A1ITP 25 A1ITP CL1 CL1 CL 0 0 N N N N N N -15.710 1.525 -5.544 2.577 -4.407 -1.715 CL1 A1ITP 26 A1ITP C18 C23 C 0 1 Y N N N N N -19.542 1.338 0.133 -1.601 1.355 -0.083 C18 A1ITP 27 A1ITP C19 C24 C 0 1 Y N N N N N -20.549 2.264 0.283 -2.955 1.622 -0.131 C19 A1ITP 28 A1ITP N2 N2 N 0 1 N N N N N N -21.369 4.529 0.079 -5.244 0.852 -0.104 N2 A1ITP 29 A1ITP C23 C25 C 0 1 N N N N N N -22.319 4.523 1.058 -6.206 -0.074 0.059 C23 A1ITP 30 A1ITP C25 C26 C 0 1 N N N N N N -22.833 6.196 -0.591 -7.289 2.082 0.131 C25 A1ITP 31 A1ITP O3 O3 O 0 1 N N N N N N -22.352 3.760 2.007 -6.007 -1.254 0.256 O3 A1ITP 32 A1ITP H4 H1 H 0 1 N N N N N N -18.815 -0.321 2.680 2.609 2.260 -2.463 H4 A1ITP 33 A1ITP H5 H2 H 0 1 N N N N N N -16.903 1.631 1.705 2.769 -0.323 -0.915 H5 A1ITP 34 A1ITP H6 H3 H 0 1 N N N N N N -14.264 1.159 0.921 2.277 0.032 1.923 H6 A1ITP 35 A1ITP H7 H4 H 0 1 N N N N N N -14.696 1.819 2.535 3.530 -0.975 1.140 H7 A1ITP 36 A1ITP H8 H5 H 0 1 N N N N N N -18.573 -1.354 -1.721 -0.033 -1.574 2.330 H8 A1ITP 37 A1ITP H10 H6 H 0 1 N N N N N N -17.372 -0.791 -5.770 1.917 -5.111 0.963 H10 A1ITP 38 A1ITP H11 H7 H 0 1 N N N N N N -16.084 1.973 -2.794 1.469 -1.783 -1.668 H11 A1ITP 39 A1ITP H14 H8 H 0 1 N N N N N N -18.978 4.992 -0.915 -4.137 -1.541 0.096 H14 A1ITP 40 A1ITP H15 H9 H 0 1 N N N N N N -17.148 3.344 -1.160 -1.724 -2.017 0.172 H15 A1ITP 41 A1ITP H17 H10 H 0 1 N N N N N N -23.115 6.473 1.549 -8.017 0.373 -1.013 H17 A1ITP 42 A1ITP H16 H11 H 0 1 N N N N N N -24.296 5.356 0.784 -8.221 0.211 0.759 H16 A1ITP 43 A1ITP H21 H12 H 0 1 N N N N N N -21.226 5.433 -1.840 -5.287 2.929 0.257 H21 A1ITP 44 A1ITP H20 H13 H 0 1 N N N N N N -20.679 6.462 -0.473 -5.774 2.436 -1.392 H20 A1ITP 45 A1ITP H1 H14 H 0 1 N N N N N N -14.623 -2.465 4.348 5.770 3.392 1.150 H1 A1ITP 46 A1ITP H2 H15 H 0 1 N N N N N N -16.845 -3.145 5.222 5.641 4.797 -0.860 H2 A1ITP 47 A1ITP H3 H16 H 0 1 N N N N N N -18.896 -2.196 4.289 4.067 4.231 -2.665 H3 A1ITP 48 A1ITP H9 H17 H 0 1 N N N N N N -18.326 -2.242 -4.014 0.761 -3.866 2.744 H9 A1ITP 49 A1ITP H12 H18 H 0 1 N N N N N N -19.687 0.317 0.454 -0.889 2.165 -0.132 H12 A1ITP 50 A1ITP H13 H19 H 0 1 N N N N N N -21.512 1.959 0.664 -3.302 2.641 -0.219 H13 A1ITP 51 A1ITP H19 H20 H 0 1 N N N N N N -22.869 7.295 -0.624 -7.941 2.675 -0.510 H19 A1ITP 52 A1ITP H18 H21 H 0 1 N N N N N N -23.495 5.784 -1.367 -7.390 2.383 1.174 H18 A1ITP 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ITP CL1 C16 SING N N 1 A1ITP C15 C16 DOUB Y N 2 A1ITP C15 C14 SING Y N 3 A1ITP C16 C17 SING Y N 4 A1ITP C14 C13 DOUB Y N 5 A1ITP C17 C11 DOUB Y N 6 A1ITP C13 C11 SING Y N 7 A1ITP C11 N1 SING N N 8 A1ITP C26 C25 SING N N 9 A1ITP C26 N2 SING N N 10 A1ITP C22 C21 DOUB Y N 11 A1ITP C22 C12 SING Y N 12 A1ITP N1 C12 SING N N 13 A1ITP N1 C10 SING N N 14 A1ITP C21 C20 SING Y N 15 A1ITP C25 C24 SING N N 16 A1ITP C12 C18 DOUB Y N 17 A1ITP O2 C10 DOUB N N 18 A1ITP C20 N2 SING N N 19 A1ITP C20 C19 DOUB Y N 20 A1ITP N2 C23 SING N N 21 A1ITP C18 C19 SING Y N 22 A1ITP C10 C7 SING N N 23 A1ITP C24 C23 SING N N 24 A1ITP C23 O3 DOUB N N 25 A1ITP C7 C8 SING N N 26 A1ITP C7 C5 SING N N 27 A1ITP C8 C9 SING N N 28 A1ITP C9 O1 DOUB N N 29 A1ITP C9 C6 SING N N 30 A1ITP C5 C4 DOUB Y N 31 A1ITP C5 C6 SING Y N 32 A1ITP C4 C3 SING Y N 33 A1ITP C6 C1 DOUB Y N 34 A1ITP C3 C2 DOUB Y N 35 A1ITP C1 C2 SING Y N 36 A1ITP C4 H4 SING N N 37 A1ITP C7 H5 SING N N 38 A1ITP C8 H6 SING N N 39 A1ITP C8 H7 SING N N 40 A1ITP C13 H8 SING N N 41 A1ITP C15 H10 SING N N 42 A1ITP C17 H11 SING N N 43 A1ITP C21 H14 SING N N 44 A1ITP C22 H15 SING N N 45 A1ITP C24 H17 SING N N 46 A1ITP C24 H16 SING N N 47 A1ITP C26 H21 SING N N 48 A1ITP C26 H20 SING N N 49 A1ITP C1 H1 SING N N 50 A1ITP C2 H2 SING N N 51 A1ITP C3 H3 SING N N 52 A1ITP C14 H9 SING N N 53 A1ITP C18 H12 SING N N 54 A1ITP C19 H13 SING N N 55 A1ITP C25 H19 SING N N 56 A1ITP C25 H18 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ITP InChI InChI 1.06 "InChI=1S/C26H21ClN2O3/c27-17-5-3-6-20(15-17)29(19-12-10-18(11-13-19)28-14-4-9-25(28)31)26(32)23-16-24(30)22-8-2-1-7-21(22)23/h1-3,5-8,10-13,15,23H,4,9,14,16H2/t23-/m1/s1" A1ITP InChIKey InChI 1.06 QHXYLNDXNZHBPZ-HSZRJFAPSA-N A1ITP SMILES_CANONICAL CACTVS 3.385 "Clc1cccc(c1)N(C(=O)[C@@H]2CC(=O)c3ccccc23)c4ccc(cc4)N5CCCC5=O" A1ITP SMILES CACTVS 3.385 "Clc1cccc(c1)N(C(=O)[CH]2CC(=O)c3ccccc23)c4ccc(cc4)N5CCCC5=O" A1ITP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)[C@@H](CC2=O)C(=O)N(c3ccc(cc3)N4CCCC4=O)c5cccc(c5)Cl" A1ITP SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C(CC2=O)C(=O)N(c3ccc(cc3)N4CCCC4=O)c5cccc(c5)Cl" # _pdbx_chem_comp_identifier.comp_id A1ITP _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R})-~{N}-(3-chlorophenyl)-3-oxidanylidene-~{N}-[4-(2-oxidanylidenepyrrolidin-1-yl)phenyl]-1,2-dihydroindene-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ITP "Create component" 2024-11-08 PDBE A1ITP "Initial release" 2024-11-27 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1ITP _pdbx_chem_comp_synonyms.name "(1R)-N-(3-chlorophenyl)-3-oxo-N-[4-(2-oxopyrrolidin-1-yl)phenyl]indane-1-carboxamide" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #