data_A1ITU # _chem_comp.id A1ITU _chem_comp.name "(4S)-4-[(1R)-2-[2-(3-methoxyphenyl)propan-2-ylamino]-1-oxidanyl-ethyl]-16-propyl-3,16-diazatricyclo[16.3.1.1^{6,10}]tricosa-1(21),6,8,10(23),18(22),19-hexaene-2,17-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C36 H47 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-11-12 _chem_comp.pdbx_modified_date 2025-03-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 585.776 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ITU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HB0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ITU C1 C1 C 0 1 N N N N N N 69.523 18.746 -29.476 -0.258 5.060 4.451 C1 A1ITU 1 A1ITU C2 C2 C 0 1 N N N N N N 69.093 20.079 -30.079 -1.018 4.507 3.244 C2 A1ITU 2 A1ITU C3 C3 C 0 1 N N N N N N 67.615 20.434 -29.765 -0.147 3.479 2.520 C3 A1ITU 3 A1ITU N1 N1 N 0 1 N N N N N N 67.416 21.877 -29.912 -0.877 2.948 1.360 N1 A1ITU 4 A1ITU C4 C4 C 0 1 N N N N N N 67.161 22.437 -31.250 -1.724 1.774 1.528 C4 A1ITU 5 A1ITU C5 C5 C 0 1 N N N N N N 65.739 22.063 -31.650 -2.046 1.507 2.996 C5 A1ITU 6 A1ITU C6 C6 C 0 1 N N N N N N 64.568 22.471 -30.776 -3.098 0.391 3.081 C6 A1ITU 7 A1ITU C7 C7 C 0 1 N N N N N N 63.210 22.035 -31.290 -2.378 -0.937 3.339 C7 A1ITU 8 A1ITU C8 C8 C 0 1 N N N N N N 62.059 22.177 -30.321 -3.402 -2.069 3.423 C8 A1ITU 9 A1ITU C9 C9 C 0 1 Y N N N N N 61.664 23.600 -30.024 -3.270 -2.986 2.234 C9 A1ITU 10 A1ITU C10 C10 C 0 1 Y N N N N N 61.075 24.400 -30.987 -3.614 -4.317 2.379 C10 A1ITU 11 A1ITU C11 C11 C 0 1 Y N N N N N 60.640 25.694 -30.687 -3.501 -5.169 1.298 C11 A1ITU 12 A1ITU C12 C12 C 0 1 Y N N N N N 60.875 26.252 -29.416 -3.044 -4.688 0.086 C12 A1ITU 13 A1ITU C13 C13 C 0 1 Y N N N N N 61.514 25.490 -28.431 -2.692 -3.344 -0.068 C13 A1ITU 14 A1ITU C14 C14 C 0 1 N N N N N N 61.745 26.088 -27.025 -2.184 -2.847 -1.390 C14 A1ITU 15 A1ITU C15 C15 C 0 1 N N S N N N 62.876 27.075 -26.980 -2.028 -1.331 -1.536 C15 A1ITU 16 A1ITU C16 C16 C 0 1 N N R N N N 63.034 27.733 -25.582 -0.569 -1.032 -1.906 C16 A1ITU 17 A1ITU C17 C17 C 0 1 N N N N N N 64.208 28.652 -25.552 0.350 -1.503 -0.778 C17 A1ITU 18 A1ITU N2 N2 N 0 1 N N N N N N 64.198 29.494 -24.307 1.734 -1.108 -1.077 N2 A1ITU 19 A1ITU C18 C18 C 0 1 N N N N N N 64.992 30.734 -24.466 2.645 -1.530 -0.005 C18 A1ITU 20 A1ITU C19 C19 C 0 1 N N N N N N 65.059 31.416 -23.091 2.151 -0.974 1.332 C19 A1ITU 21 A1ITU C20 C20 C 0 1 N N N N N N 66.435 30.456 -24.910 2.681 -3.058 0.061 C20 A1ITU 22 A1ITU C21 C21 C 0 1 Y N N N N N 64.256 31.671 -25.434 4.029 -1.006 -0.287 C21 A1ITU 23 A1ITU C22 C22 C 0 1 Y N N N N N 64.791 32.031 -26.669 4.264 -0.249 -1.419 C22 A1ITU 24 A1ITU C23 C23 C 0 1 Y N N N N N 64.036 32.814 -27.542 5.532 0.238 -1.678 C23 A1ITU 25 A1ITU C24 C24 C 0 1 Y N N N N N 62.750 33.205 -27.219 6.568 -0.031 -0.805 C24 A1ITU 26 A1ITU C25 C25 C 0 1 Y N N N N N 62.228 32.877 -25.996 6.335 -0.791 0.333 C25 A1ITU 27 A1ITU C26 C26 C 0 1 Y N N N N N 62.966 32.066 -25.123 5.062 -1.278 0.590 C26 A1ITU 28 A1ITU O1 O1 O 0 1 N N N N N N 60.964 33.314 -25.712 7.352 -1.057 1.193 O1 A1ITU 29 A1ITU C27 C27 C 0 1 N N N N N N 60.587 33.530 -24.338 8.637 -0.523 0.865 C27 A1ITU 30 A1ITU O2 O2 O 0 1 N N N N N N 61.860 28.438 -25.205 -0.234 -1.720 -3.113 O2 A1ITU 31 A1ITU N3 N3 N 0 1 N N N N N N 64.132 26.433 -27.388 -2.920 -0.861 -2.626 N3 A1ITU 32 A1ITU C28 C28 C 0 1 N N N N N N 65.013 26.977 -28.226 -2.864 0.387 -3.114 C28 A1ITU 33 A1ITU C29 C29 C 0 1 Y N N N N N 66.248 26.190 -28.593 -2.221 1.633 -2.697 C29 A1ITU 34 A1ITU C30 C30 C 0 1 Y N N N N N 67.365 26.898 -29.028 -2.003 2.574 -3.728 C30 A1ITU 35 A1ITU C31 C31 C 0 1 Y N N N N N 68.514 26.247 -29.437 -1.399 3.780 -3.465 C31 A1ITU 36 A1ITU C32 C32 C 0 1 Y N N N N N 68.573 24.862 -29.360 -0.998 4.084 -2.185 C32 A1ITU 37 A1ITU C33 C33 C 0 1 Y N N N N N 67.461 24.149 -28.950 -1.204 3.166 -1.132 C33 A1ITU 38 A1ITU C34 C34 C 0 1 Y N N N N N 66.311 24.801 -28.507 -1.815 1.947 -1.408 C34 A1ITU 39 A1ITU C35 C35 C 0 1 N N N N N N 67.556 22.670 -28.826 -0.729 3.588 0.197 C35 A1ITU 40 A1ITU O3 O3 O 0 1 N N N N N N 67.812 22.238 -27.710 -0.127 4.655 0.248 O3 A1ITU 41 A1ITU O4 O4 O 0 1 N N N N N N 64.905 28.124 -28.623 -3.507 0.514 -4.156 O4 A1ITU 42 A1ITU C36 C36 C 0 1 Y N N N N N 61.901 24.185 -28.746 -2.820 -2.503 1.026 C36 A1ITU 43 A1ITU H1 H1 H 0 1 N N N N N N 70.575 18.550 -29.731 -0.016 4.244 5.133 H1 A1ITU 44 A1ITU H2 H2 H 0 1 N N N N N N 69.413 18.786 -28.382 0.662 5.537 4.114 H2 A1ITU 45 A1ITU H3 H3 H 0 1 N N N N N N 68.892 17.941 -29.879 -0.879 5.792 4.967 H3 A1ITU 46 A1ITU H5 H4 H 0 1 N N N N N N 69.217 20.027 -31.171 -1.938 4.030 3.581 H5 A1ITU 47 A1ITU H4 H5 H 0 1 N N N N N N 69.738 20.872 -29.674 -1.260 5.322 2.562 H4 A1ITU 48 A1ITU H6 H6 H 0 1 N N N N N N 66.954 19.900 -30.463 0.774 3.956 2.182 H6 A1ITU 49 A1ITU H7 H7 H 0 1 N N N N N N 67.378 20.135 -28.733 0.095 2.663 3.201 H7 A1ITU 50 A1ITU H9 H8 H 0 1 N N N N N N 67.876 22.017 -31.973 -2.662 1.930 0.988 H9 A1ITU 51 A1ITU H8 H9 H 0 1 N N N N N N 67.266 23.532 -31.223 -1.217 0.901 1.111 H8 A1ITU 52 A1ITU H10 H10 H 0 1 N N N N N N 65.563 22.505 -32.642 -1.148 1.183 3.522 H10 A1ITU 53 A1ITU H11 H11 H 0 1 N N N N N N 65.710 20.966 -31.727 -2.450 2.406 3.460 H11 A1ITU 54 A1ITU H12 H12 H 0 1 N N N N N N 64.715 22.030 -29.779 -3.784 0.600 3.901 H12 A1ITU 55 A1ITU H13 H13 H 0 1 N N N N N N 64.567 23.568 -30.695 -3.649 0.335 2.143 H13 A1ITU 56 A1ITU H14 H14 H 0 1 N N N N N N 62.977 22.638 -32.180 -1.667 -1.132 2.541 H14 A1ITU 57 A1ITU H15 H15 H 0 1 N N N N N N 63.282 20.975 -31.574 -1.838 -0.871 4.287 H15 A1ITU 58 A1ITU H16 H16 H 0 1 N N N N N N 61.186 21.660 -30.746 -3.234 -2.641 4.339 H16 A1ITU 59 A1ITU H17 H17 H 0 1 N N N N N N 62.345 21.695 -29.374 -4.409 -1.649 3.448 H17 A1ITU 60 A1ITU H18 H18 H 0 1 N N N N N N 60.949 24.018 -31.989 -3.967 -4.685 3.331 H18 A1ITU 61 A1ITU H19 H19 H 0 1 N N N N N N 60.119 26.271 -31.437 -3.771 -6.210 1.401 H19 A1ITU 62 A1ITU H20 H20 H 0 1 N N N N N N 60.564 27.264 -29.202 -2.956 -5.355 -0.759 H20 A1ITU 63 A1ITU H21 H21 H 0 1 N N N N N N 60.824 26.597 -26.706 -1.209 -3.310 -1.581 H21 A1ITU 64 A1ITU H22 H22 H 0 1 N N N N N N 61.970 25.267 -26.329 -2.866 -3.197 -2.174 H22 A1ITU 65 A1ITU H23 H23 H 0 1 N N N N N N 62.651 27.879 -27.696 -2.280 -0.825 -0.612 H23 A1ITU 66 A1ITU H24 H24 H 0 1 N N N N N N 63.215 26.925 -24.858 -0.444 0.041 -2.053 H24 A1ITU 67 A1ITU H25 H25 H 0 1 N N N N N N 65.132 28.056 -25.577 0.037 -1.047 0.161 H25 A1ITU 68 A1ITU H26 H26 H 0 1 N N N N N N 64.173 29.310 -26.432 0.293 -2.588 -0.692 H26 A1ITU 69 A1ITU H27 H27 H 0 1 N N N N N N 63.253 29.742 -24.093 2.030 -1.475 -1.969 H27 A1ITU 70 A1ITU H30 H29 H 0 1 N N N N N N 65.584 30.760 -22.381 1.202 -1.443 1.593 H30 A1ITU 71 A1ITU H28 H30 H 0 1 N N N N N N 65.602 32.368 -23.180 2.887 -1.186 2.108 H28 A1ITU 72 A1ITU H29 H31 H 0 1 N N N N N N 64.039 31.608 -22.727 2.013 0.104 1.249 H29 A1ITU 73 A1ITU H32 H32 H 0 1 N N N N N N 66.918 29.783 -24.187 2.992 -3.456 -0.905 H32 A1ITU 74 A1ITU H33 H33 H 0 1 N N N N N N 66.428 29.983 -25.903 3.389 -3.372 0.829 H33 A1ITU 75 A1ITU H31 H34 H 0 1 N N N N N N 66.993 31.403 -24.958 1.689 -3.435 0.307 H31 A1ITU 76 A1ITU H34 H35 H 0 1 N N N N N N 65.783 31.706 -26.948 3.455 -0.038 -2.103 H34 A1ITU 77 A1ITU H35 H36 H 0 1 N N N N N N 64.463 33.120 -28.486 5.712 0.829 -2.563 H35 A1ITU 78 A1ITU H36 H37 H 0 1 N N N N N N 62.160 33.767 -27.928 7.558 0.349 -1.008 H36 A1ITU 79 A1ITU H37 H38 H 0 1 N N N N N N 62.521 31.744 -24.193 4.877 -1.866 1.477 H37 A1ITU 80 A1ITU H39 H39 H 0 1 N N N N N N 59.544 33.878 -24.294 8.575 0.564 0.811 H39 A1ITU 81 A1ITU H40 H40 H 0 1 N N N N N N 60.683 32.587 -23.779 9.356 -0.809 1.632 H40 A1ITU 82 A1ITU H38 H41 H 0 1 N N N N N N 61.246 34.289 -23.892 8.958 -0.917 -0.099 H38 A1ITU 83 A1ITU H48 H42 H 0 1 N N N N N N 61.986 28.829 -24.348 -0.322 -2.681 -3.056 H48 A1ITU 84 A1ITU H42 H43 H 0 1 N N N N N N 64.339 25.530 -27.013 -3.573 -1.490 -3.005 H42 A1ITU 85 A1ITU H43 H44 H 0 1 N N N N N N 67.333 27.977 -29.046 -2.314 2.340 -4.736 H43 A1ITU 86 A1ITU H44 H45 H 0 1 N N N N N N 69.356 26.809 -29.812 -1.237 4.488 -4.265 H44 A1ITU 87 A1ITU H45 H46 H 0 1 N N N N N N 69.484 24.343 -29.619 -0.524 5.032 -1.980 H45 A1ITU 88 A1ITU H46 H47 H 0 1 N N N N N N 65.482 24.238 -28.104 -1.982 1.232 -0.617 H46 A1ITU 89 A1ITU H47 H48 H 0 1 N N N N N N 62.400 23.596 -27.991 -2.572 -1.456 0.942 H47 A1ITU 90 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ITU C5 C4 SING N N 1 A1ITU C5 C6 SING N N 2 A1ITU C7 C6 SING N N 3 A1ITU C7 C8 SING N N 4 A1ITU C4 N1 SING N N 5 A1ITU C10 C11 DOUB Y N 6 A1ITU C10 C9 SING Y N 7 A1ITU C11 C12 SING Y N 8 A1ITU C8 C9 SING N N 9 A1ITU C2 C3 SING N N 10 A1ITU C2 C1 SING N N 11 A1ITU C9 C36 DOUB Y N 12 A1ITU N1 C3 SING N N 13 A1ITU N1 C35 SING N N 14 A1ITU C31 C32 DOUB Y N 15 A1ITU C31 C30 SING Y N 16 A1ITU C12 C13 DOUB Y N 17 A1ITU C32 C33 SING Y N 18 A1ITU C30 C29 DOUB Y N 19 A1ITU C33 C35 SING N N 20 A1ITU C33 C34 DOUB Y N 21 A1ITU C35 O3 DOUB N N 22 A1ITU C36 C13 SING Y N 23 A1ITU O4 C28 DOUB N N 24 A1ITU C29 C34 SING Y N 25 A1ITU C29 C28 SING N N 26 A1ITU C13 C14 SING N N 27 A1ITU C28 N3 SING N N 28 A1ITU C23 C24 DOUB Y N 29 A1ITU C23 C22 SING Y N 30 A1ITU N3 C15 SING N N 31 A1ITU C24 C25 SING Y N 32 A1ITU C14 C15 SING N N 33 A1ITU C15 C16 SING N N 34 A1ITU C22 C21 DOUB Y N 35 A1ITU C25 O1 SING N N 36 A1ITU C25 C26 DOUB Y N 37 A1ITU O1 C27 SING N N 38 A1ITU C16 C17 SING N N 39 A1ITU C16 O2 SING N N 40 A1ITU C17 N2 SING N N 41 A1ITU C21 C26 SING Y N 42 A1ITU C21 C18 SING N N 43 A1ITU C20 C18 SING N N 44 A1ITU C18 N2 SING N N 45 A1ITU C18 C19 SING N N 46 A1ITU C1 H1 SING N N 47 A1ITU C1 H2 SING N N 48 A1ITU C1 H3 SING N N 49 A1ITU C2 H5 SING N N 50 A1ITU C2 H4 SING N N 51 A1ITU C3 H6 SING N N 52 A1ITU C3 H7 SING N N 53 A1ITU C4 H9 SING N N 54 A1ITU C4 H8 SING N N 55 A1ITU C5 H10 SING N N 56 A1ITU C5 H11 SING N N 57 A1ITU C6 H12 SING N N 58 A1ITU C6 H13 SING N N 59 A1ITU C7 H14 SING N N 60 A1ITU C7 H15 SING N N 61 A1ITU C8 H16 SING N N 62 A1ITU C8 H17 SING N N 63 A1ITU C10 H18 SING N N 64 A1ITU C11 H19 SING N N 65 A1ITU C12 H20 SING N N 66 A1ITU C14 H21 SING N N 67 A1ITU C14 H22 SING N N 68 A1ITU C15 H23 SING N N 69 A1ITU C16 H24 SING N N 70 A1ITU C17 H25 SING N N 71 A1ITU C17 H26 SING N N 72 A1ITU N2 H27 SING N N 73 A1ITU C19 H30 SING N N 74 A1ITU C19 H28 SING N N 75 A1ITU C19 H29 SING N N 76 A1ITU C20 H32 SING N N 77 A1ITU C20 H33 SING N N 78 A1ITU C20 H31 SING N N 79 A1ITU C22 H34 SING N N 80 A1ITU C23 H35 SING N N 81 A1ITU C24 H36 SING N N 82 A1ITU C26 H37 SING N N 83 A1ITU C27 H39 SING N N 84 A1ITU C27 H40 SING N N 85 A1ITU C27 H38 SING N N 86 A1ITU O2 H48 SING N N 87 A1ITU N3 H42 SING N N 88 A1ITU C30 H43 SING N N 89 A1ITU C31 H44 SING N N 90 A1ITU C32 H45 SING N N 91 A1ITU C34 H46 SING N N 92 A1ITU C36 H47 SING N N 93 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ITU InChI InChI 1.06 "InChI=1S/C36H47N3O4/c1-5-19-39-20-8-6-7-12-26-13-9-14-27(21-26)22-32(38-34(41)28-15-10-16-29(23-28)35(39)42)33(40)25-37-36(2,3)30-17-11-18-31(24-30)43-4/h9-11,13-18,21,23-24,32-33,37,40H,5-8,12,19-20,22,25H2,1-4H3,(H,38,41)/t32-,33+/m0/s1" A1ITU InChIKey InChI 1.06 PYBIHWRQNXYDCA-JHOUSYSJSA-N A1ITU SMILES_CANONICAL CACTVS 3.385 "CCCN1CCCCCc2cccc(C[C@H](NC(=O)c3cccc(c3)C1=O)[C@H](O)CNC(C)(C)c4cccc(OC)c4)c2" A1ITU SMILES CACTVS 3.385 "CCCN1CCCCCc2cccc(C[CH](NC(=O)c3cccc(c3)C1=O)[CH](O)CNC(C)(C)c4cccc(OC)c4)c2" A1ITU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCN1CCCCCc2cccc(c2)C[C@H](NC(=O)c3cccc(c3)C1=O)[C@@H](CNC(C)(C)c4cccc(c4)OC)O" A1ITU SMILES "OpenEye OEToolkits" 2.0.7 "CCCN1CCCCCc2cccc(c2)CC(NC(=O)c3cccc(c3)C1=O)C(CNC(C)(C)c4cccc(c4)OC)O" # _pdbx_chem_comp_identifier.comp_id A1ITU _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{S})-4-[(1~{R})-2-[2-(3-methoxyphenyl)propan-2-ylamino]-1-oxidanyl-ethyl]-16-propyl-3,16-diazatricyclo[16.3.1.1^{6,10}]tricosa-1(21),6,8,10(23),18(22),19-hexaene-2,17-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ITU "Create component" 2024-11-12 PDBE A1ITU "Modify coordinates" 2025-02-04 PDBE A1ITU "Initial release" 2025-03-19 RCSB #