data_A1IYG # _chem_comp.id A1IYG _chem_comp.name "6-[3-[[(3~{S})-1-(2-thiophen-3-ylphenyl)pyrrolidin-3-yl]amino]propoxy]-4~{H}-1,4-benzoxazin-3-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N3 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-10 _chem_comp.pdbx_modified_date 2026-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.565 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IYG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9HYI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IYG C6 C1 C 0 1 Y N N N N N 116.320 114.041 88.119 -7.599 0.551 0.184 C6 A1IYG 1 A1IYG C7 C2 C 0 1 Y N N N N N 117.300 113.181 88.605 -7.790 -0.641 -0.512 C7 A1IYG 2 A1IYG C8 C3 C 0 1 Y N N N N N 117.458 112.981 89.964 -6.697 -1.390 -0.914 C8 A1IYG 3 A1IYG C10 C4 C 0 1 Y N N N N N 115.649 114.504 90.369 -5.225 0.233 0.069 C10 A1IYG 4 A1IYG C13 C5 C 0 1 N N N N N N 114.166 117.276 91.128 -1.555 0.467 0.312 C13 A1IYG 5 A1IYG C17 C6 C 0 1 N N N N N N 111.090 119.484 92.091 2.413 -0.270 -1.673 C17 A1IYG 6 A1IYG C20 C7 C 0 1 Y N N N N N 110.440 121.212 95.223 5.397 -1.212 0.070 C20 A1IYG 7 A1IYG C21 C8 C 0 1 Y N N N N N 110.656 120.946 96.570 5.095 -2.559 0.208 C21 A1IYG 8 A1IYG C22 C9 C 0 1 Y N N N N N 110.028 121.715 97.534 6.068 -3.447 0.628 C22 A1IYG 9 A1IYG C24 C10 C 0 1 Y N N N N N 108.969 123.020 95.829 7.660 -1.661 0.779 C24 A1IYG 10 A1IYG C26 C11 C 0 1 Y N N N N N 109.321 122.566 93.416 7.021 0.682 0.217 C26 A1IYG 11 A1IYG O1 O1 O 0 1 N N N N N N 116.919 113.805 84.656 -10.919 1.355 0.874 O1 A1IYG 12 A1IYG C2 C12 C 0 1 N N N N N N 116.908 113.496 85.843 -9.934 0.718 0.564 C2 A1IYG 13 A1IYG C3 C13 C 0 1 N N N N N N 117.648 112.337 86.406 -10.064 -0.734 0.171 C3 A1IYG 14 A1IYG O4 O2 O 0 1 N N N N N N 118.118 112.488 87.751 -9.055 -1.059 -0.789 O4 A1IYG 15 A1IYG N5 N1 N 0 1 N N N N N N 116.203 114.206 86.745 -8.716 1.301 0.578 N5 A1IYG 16 A1IYG C9 C14 C 0 1 Y N N N N N 116.628 113.647 90.848 -5.417 -0.953 -0.624 C9 A1IYG 17 A1IYG O11 O3 O 0 1 N N N N N N 114.881 115.036 91.374 -3.964 0.657 0.352 O11 A1IYG 18 A1IYG C12 C15 C 0 1 N N N N N N 113.741 115.840 91.035 -2.886 -0.168 -0.095 C12 A1IYG 19 A1IYG C14 C16 C 0 1 N N N N N N 114.287 117.709 92.573 -0.401 -0.417 -0.166 C14 A1IYG 20 A1IYG N15 N2 N 0 1 N N N N N N 112.947 118.109 93.094 0.877 0.193 0.225 N15 A1IYG 21 A1IYG C16 C17 C 0 1 N N S N N N 112.489 119.485 92.695 2.010 -0.630 -0.219 C16 A1IYG 22 A1IYG C18 C18 C 0 1 N N N N N N 110.236 119.537 93.341 3.908 -0.676 -1.694 C18 A1IYG 23 A1IYG N19 N3 N 0 1 N N N N N N 110.995 120.432 94.211 4.415 -0.314 -0.353 N19 A1IYG 24 A1IYG C23 C19 C 0 1 Y N N N N N 109.192 122.745 97.166 7.346 -2.999 0.912 C23 A1IYG 25 A1IYG C25 C20 C 0 1 Y N N N N N 109.589 122.260 94.838 6.688 -0.757 0.362 C25 A1IYG 26 A1IYG C27 C21 C 0 1 Y N N N N N 108.069 122.886 92.968 6.738 1.386 -0.894 C27 A1IYG 27 A1IYG S28 S1 S 0 1 Y N N N N N 108.100 123.482 91.378 7.281 3.047 -0.692 S28 A1IYG 28 A1IYG C29 C22 C 0 1 Y N N N N N 109.791 123.317 91.272 7.877 2.692 0.924 C29 A1IYG 29 A1IYG C30 C23 C 0 1 Y N N N N N 110.299 122.819 92.429 7.648 1.416 1.222 C30 A1IYG 30 A1IYG C31 C24 C 0 1 N N N N N N 112.415 120.433 93.882 3.280 -0.289 0.588 C31 A1IYG 31 A1IYG C32 C25 C 0 1 Y N N N N N 115.486 114.712 89.006 -6.317 0.986 0.474 C32 A1IYG 32 A1IYG H1 H1 H 0 1 N N N N N N 118.222 112.312 90.332 -6.844 -2.314 -1.454 H1 A1IYG 33 A1IYG H2 H2 H 0 1 N N N N N N 115.141 117.396 90.633 -1.470 1.454 -0.142 H2 A1IYG 34 A1IYG H3 H3 H 0 1 N N N N N N 113.419 117.906 90.624 -1.515 0.561 1.397 H3 A1IYG 35 A1IYG H4 H4 H 0 1 N N N N N N 110.925 120.364 91.452 1.840 -0.855 -2.393 H4 A1IYG 36 A1IYG H5 H5 H 0 1 N N N N N N 110.901 118.569 91.511 2.296 0.798 -1.858 H5 A1IYG 37 A1IYG H6 H6 H 0 1 N N N N N N 111.313 120.141 96.864 4.099 -2.914 -0.012 H6 A1IYG 38 A1IYG H7 H7 H 0 1 N N N N N N 110.195 121.506 98.580 5.829 -4.495 0.735 H7 A1IYG 39 A1IYG H8 H8 H 0 1 N N N N N N 108.310 123.829 95.551 8.659 -1.316 1.002 H8 A1IYG 40 A1IYG H9 H9 H 0 1 N N N N N N 116.979 111.464 86.379 -9.941 -1.361 1.054 H9 A1IYG 41 A1IYG H10 H10 H 0 1 N N N N N N 118.521 112.150 85.763 -11.049 -0.907 -0.262 H10 A1IYG 42 A1IYG H11 H11 H 0 1 N N N N N N 115.558 114.891 86.406 -8.616 2.226 0.852 H11 A1IYG 43 A1IYG H12 H12 H 0 1 N N N N N N 116.743 113.499 91.912 -4.565 -1.538 -0.938 H12 A1IYG 44 A1IYG H13 H13 H 0 1 N N N N N N 112.919 115.644 91.739 -2.927 -0.263 -1.180 H13 A1IYG 45 A1IYG H14 H14 H 0 1 N N N N N N 113.409 115.611 90.012 -2.972 -1.155 0.359 H14 A1IYG 46 A1IYG H15 H15 H 0 1 N N N N N N 114.678 116.874 93.173 -0.487 -1.404 0.288 H15 A1IYG 47 A1IYG H16 H16 H 0 1 N N N N N N 114.976 118.564 92.642 -0.442 -0.512 -1.251 H16 A1IYG 48 A1IYG H17 H17 H 0 1 N N N N N N 112.275 117.450 92.757 0.952 1.134 -0.131 H17 A1IYG 49 A1IYG H19 H19 H 0 1 N N N N N N 113.193 119.897 91.956 1.770 -1.690 -0.137 H19 A1IYG 50 A1IYG H20 H20 H 0 1 N N N N N N 109.239 119.947 93.123 4.007 -1.749 -1.860 H20 A1IYG 51 A1IYG H21 H21 H 0 1 N N N N N N 110.131 118.539 93.793 4.441 -0.120 -2.464 H21 A1IYG 52 A1IYG H22 H22 H 0 1 N N N N N N 108.708 123.341 97.925 8.101 -3.700 1.236 H22 A1IYG 53 A1IYG H23 H23 H 0 1 N N N N N N 107.169 122.773 93.555 6.252 0.993 -1.775 H23 A1IYG 54 A1IYG H24 H24 H 0 1 N N N N N N 110.379 123.573 90.403 8.355 3.406 1.578 H24 A1IYG 55 A1IYG H25 H25 H 0 1 N N N N N N 111.352 122.634 92.580 7.933 0.980 2.168 H25 A1IYG 56 A1IYG H26 H26 H 0 1 N N N N N N 113.017 120.061 94.724 3.185 0.703 1.028 H26 A1IYG 57 A1IYG H27 H27 H 0 1 N N N N N N 112.756 121.441 93.605 3.432 -1.032 1.371 H27 A1IYG 58 A1IYG H28 H28 H 0 1 N N N N N N 114.724 115.384 88.641 -6.167 1.910 1.014 H28 A1IYG 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IYG O1 C2 DOUB N N 1 A1IYG C2 C3 SING N N 2 A1IYG C2 N5 SING N N 3 A1IYG C3 O4 SING N N 4 A1IYG N5 C6 SING N N 5 A1IYG O4 C7 SING N N 6 A1IYG C6 C7 DOUB Y N 7 A1IYG C6 C32 SING Y N 8 A1IYG C7 C8 SING Y N 9 A1IYG C32 C10 DOUB Y N 10 A1IYG C8 C9 DOUB Y N 11 A1IYG C10 C9 SING Y N 12 A1IYG C10 O11 SING N N 13 A1IYG C12 C13 SING N N 14 A1IYG C12 O11 SING N N 15 A1IYG C13 C14 SING N N 16 A1IYG C29 S28 SING Y N 17 A1IYG C29 C30 DOUB Y N 18 A1IYG S28 C27 SING Y N 19 A1IYG C17 C16 SING N N 20 A1IYG C17 C18 SING N N 21 A1IYG C30 C26 SING Y N 22 A1IYG C14 N15 SING N N 23 A1IYG C16 N15 SING N N 24 A1IYG C16 C31 SING N N 25 A1IYG C27 C26 DOUB Y N 26 A1IYG C18 N19 SING N N 27 A1IYG C26 C25 SING N N 28 A1IYG C31 N19 SING N N 29 A1IYG N19 C20 SING N N 30 A1IYG C25 C20 DOUB Y N 31 A1IYG C25 C24 SING Y N 32 A1IYG C20 C21 SING Y N 33 A1IYG C24 C23 DOUB Y N 34 A1IYG C21 C22 DOUB Y N 35 A1IYG C23 C22 SING Y N 36 A1IYG C8 H1 SING N N 37 A1IYG C13 H2 SING N N 38 A1IYG C13 H3 SING N N 39 A1IYG C17 H4 SING N N 40 A1IYG C17 H5 SING N N 41 A1IYG C21 H6 SING N N 42 A1IYG C22 H7 SING N N 43 A1IYG C24 H8 SING N N 44 A1IYG C3 H9 SING N N 45 A1IYG C3 H10 SING N N 46 A1IYG N5 H11 SING N N 47 A1IYG C9 H12 SING N N 48 A1IYG C12 H13 SING N N 49 A1IYG C12 H14 SING N N 50 A1IYG C14 H15 SING N N 51 A1IYG C14 H16 SING N N 52 A1IYG N15 H17 SING N N 53 A1IYG C16 H19 SING N N 54 A1IYG C18 H20 SING N N 55 A1IYG C18 H21 SING N N 56 A1IYG C23 H22 SING N N 57 A1IYG C27 H23 SING N N 58 A1IYG C29 H24 SING N N 59 A1IYG C30 H25 SING N N 60 A1IYG C31 H26 SING N N 61 A1IYG C31 H27 SING N N 62 A1IYG C32 H28 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IYG InChI InChI 1.06 "InChI=1S/C25H27N3O3S/c29-25-16-31-24-7-6-20(14-22(24)27-25)30-12-3-10-26-19-8-11-28(15-19)23-5-2-1-4-21(23)18-9-13-32-17-18/h1-2,4-7,9,13-14,17,19,26H,3,8,10-12,15-16H2,(H,27,29)/t19-/m0/s1" A1IYG InChIKey InChI 1.06 GAUUHDKNCXFZEI-IBGZPJMESA-N A1IYG SMILES_CANONICAL CACTVS 3.385 "O=C1COc2ccc(OCCCN[C@H]3CCN(C3)c4ccccc4c5cscc5)cc2N1" A1IYG SMILES CACTVS 3.385 "O=C1COc2ccc(OCCCN[CH]3CCN(C3)c4ccccc4c5cscc5)cc2N1" A1IYG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2ccsc2)N3CC[C@@H](C3)NCCCOc4ccc5c(c4)NC(=O)CO5" A1IYG SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)c2ccsc2)N3CCC(C3)NCCCOc4ccc5c(c4)NC(=O)CO5" # _pdbx_chem_comp_identifier.comp_id A1IYG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-[3-[[(3~{S})-1-(2-thiophen-3-ylphenyl)pyrrolidin-3-yl]amino]propoxy]-4~{H}-1,4-benzoxazin-3-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IYG "Create component" 2025-01-10 PDBE A1IYG "Initial release" 2026-01-21 RCSB #