data_A1IZ8 # _chem_comp.id A1IZ8 _chem_comp.name "1-[2-[5-(1,3-benzoxazol-4-yl)-2,4-bis(fluoranyl)phenyl]-3-pyrimidin-4-yl-4,6-dihydropyrrolo[3,4-d]imidazol-5-yl]propan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H18 F2 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-28 _chem_comp.pdbx_modified_date 2025-02-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.446 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IZ8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GC5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IZ8 C1 C1 C 0 1 Y N N N N N -8.046 6.008 -13.019 1.930 -3.028 -0.895 C1 A1IZ8 1 A1IZ8 C2 C2 C 0 1 Y N N N N N -8.273 7.196 -12.373 0.608 -2.635 -0.805 C2 A1IZ8 2 A1IZ8 C3 C3 C 0 1 Y N N N N N -7.541 8.352 -12.615 0.269 -1.462 -0.122 C3 A1IZ8 3 A1IZ8 C7 C4 C 0 1 Y N N N N N -5.285 7.414 -16.550 3.706 -0.128 2.385 C7 A1IZ8 4 A1IZ8 C8 C5 C 0 1 Y N N N N N -4.225 7.364 -17.445 4.706 0.626 2.975 C8 A1IZ8 5 A1IZ8 C9 C6 C 0 1 Y N N N N N -2.984 6.904 -17.041 5.672 1.238 2.203 C9 A1IZ8 6 A1IZ8 C10 C7 C 0 1 Y N N N N N -2.830 6.528 -15.722 5.651 1.102 0.823 C10 A1IZ8 7 A1IZ8 C11 C8 C 0 1 Y N N N N N -2.381 5.241 -14.026 5.938 1.114 -1.339 C11 A1IZ8 8 A1IZ8 C12 C9 C 0 1 Y N N N N N -3.876 6.525 -14.815 4.645 0.341 0.211 C12 A1IZ8 9 A1IZ8 C13 C10 C 0 1 Y N N N N N -7.836 9.618 -11.924 -1.144 -1.042 -0.026 C13 A1IZ8 10 A1IZ8 C14 C11 C 0 1 Y N N N N N -8.329 11.694 -11.633 -3.288 -1.092 0.294 C14 A1IZ8 11 A1IZ8 C15 C12 C 0 1 N N N N N N -8.630 13.154 -11.549 -4.774 -1.196 0.531 C15 A1IZ8 12 A1IZ8 C16 C13 C 0 1 N N N N N N -8.607 12.171 -9.342 -4.238 1.001 -0.098 C16 A1IZ8 13 A1IZ8 C19 C14 C 0 1 Y N N N N N -8.556 9.026 -8.302 -1.065 2.556 -0.016 C19 A1IZ8 14 A1IZ8 C20 C15 C 0 1 Y N N N N N -8.227 8.149 -7.291 -0.303 3.632 -0.432 C20 A1IZ8 15 A1IZ8 C21 C16 C 0 1 Y N N N N N -6.661 7.183 -8.577 0.719 2.291 -1.996 C21 A1IZ8 16 A1IZ8 C22 C17 C 0 1 N N N N N N -9.517 14.423 -9.587 -6.655 0.472 0.378 C22 A1IZ8 17 A1IZ8 C24 C18 C 0 1 N N N N N N -9.277 16.878 -9.661 -9.066 0.090 0.816 C24 A1IZ8 18 A1IZ8 O1 O1 O 0 1 N N N N N N -9.881 14.436 -8.422 -7.000 1.611 0.140 O1 A1IZ8 19 A1IZ8 C23 C19 C 0 1 N N N N N N -9.590 15.661 -10.440 -7.679 -0.556 0.782 C23 A1IZ8 20 A1IZ8 N2 N1 N 0 1 N N N N N N -8.956 13.333 -10.139 -5.356 0.128 0.280 N2 A1IZ8 21 A1IZ8 C17 C20 C 0 1 Y N N N N N -8.313 11.146 -10.383 -2.984 0.167 -0.066 C17 A1IZ8 22 A1IZ8 N1 N2 N 0 1 Y N N N N N -8.060 10.740 -12.583 -2.154 -1.811 0.314 N1 A1IZ8 23 A1IZ8 N3 N3 N 0 1 Y N N N N N -8.035 9.798 -10.570 -1.625 0.215 -0.270 N3 A1IZ8 24 A1IZ8 C18 C21 C 0 1 Y N N N N N -7.852 8.861 -9.489 -0.881 1.330 -0.653 C18 A1IZ8 25 A1IZ8 N5 N4 N 0 1 Y N N N N N -6.889 7.951 -9.645 0.014 1.240 -1.631 N5 A1IZ8 26 A1IZ8 N4 N5 N 0 1 Y N N N N N -7.282 7.213 -7.404 0.566 3.466 -1.418 N4 A1IZ8 27 A1IZ8 F1 F1 F 0 1 N N N N N N -9.281 7.241 -11.470 -0.359 -3.385 -1.379 F1 A1IZ8 28 A1IZ8 C4 C22 C 0 1 Y N N N N N -6.560 8.290 -13.610 1.268 -0.691 0.468 C4 A1IZ8 29 A1IZ8 C5 C23 C 0 1 Y N N N N N -6.293 7.099 -14.288 2.597 -1.092 0.375 C5 A1IZ8 30 A1IZ8 C C24 C 0 1 Y N N N N N -7.052 5.984 -13.962 2.924 -2.268 -0.306 C A1IZ8 31 A1IZ8 F F2 F 0 1 N N N N N N -6.774 4.817 -14.571 4.214 -2.658 -0.398 F A1IZ8 32 A1IZ8 C6 C25 C 0 1 Y N N N N N -5.128 7.025 -15.223 3.664 -0.279 1.005 C6 A1IZ8 33 A1IZ8 N N6 N 0 1 Y N N N N N -3.561 5.672 -13.768 4.881 0.389 -1.126 N A1IZ8 34 A1IZ8 O O2 O 0 1 Y N N N N N -1.844 5.712 -15.226 6.434 1.565 -0.176 O A1IZ8 35 A1IZ8 H1 H1 H 0 1 N N N N N N -8.627 5.126 -12.794 2.187 -3.934 -1.424 H1 A1IZ8 36 A1IZ8 H2 H2 H 0 1 N N N N N N -6.250 7.761 -16.890 2.958 -0.606 3.001 H2 A1IZ8 37 A1IZ8 H3 H3 H 0 1 N N N N N N -4.370 7.687 -18.465 4.729 0.737 4.049 H3 A1IZ8 38 A1IZ8 H4 H4 H 0 1 N N N N N N -2.161 6.841 -17.737 6.447 1.825 2.675 H4 A1IZ8 39 A1IZ8 H5 H5 H 0 1 N N N N N N -1.847 4.570 -13.370 6.357 1.323 -2.312 H5 A1IZ8 40 A1IZ8 H10 H10 H 0 1 N N N N N N -9.310 9.790 -8.180 -1.781 2.662 0.785 H10 A1IZ8 41 A1IZ8 H11 H11 H 0 1 N N N N N N -8.763 8.223 -6.356 -0.415 4.597 0.041 H11 A1IZ8 42 A1IZ8 H12 H12 H 0 1 N N N N N N -5.876 6.448 -8.680 1.437 2.190 -2.797 H12 A1IZ8 43 A1IZ8 H13 H13 H 0 1 N N N N N N -9.340 17.760 -10.316 -9.807 -0.654 1.109 H13 A1IZ8 44 A1IZ8 H14 H14 H 0 1 N N N N N N -9.998 16.981 -8.837 -9.068 0.908 1.537 H14 A1IZ8 45 A1IZ8 H15 H15 H 0 1 N N N N N N -8.260 16.799 -9.250 -9.310 0.477 -0.173 H15 A1IZ8 46 A1IZ8 H16 H16 H 0 1 N N N N N N -10.606 15.752 -10.851 -7.677 -1.374 0.062 H16 A1IZ8 47 A1IZ8 H17 H17 H 0 1 N N N N N N -8.868 15.569 -11.265 -7.435 -0.943 1.771 H17 A1IZ8 48 A1IZ8 H18 H18 H 0 1 N N N N N N -5.999 9.179 -13.858 1.012 0.216 0.997 H18 A1IZ8 49 A1IZ8 H6 H6 H 0 1 N N N N N N -7.755 13.757 -11.833 -5.208 -1.926 -0.153 H6 A1IZ8 50 A1IZ8 H7 H7 H 0 1 N N N N N N -9.483 13.421 -12.190 -4.965 -1.495 1.562 H7 A1IZ8 51 A1IZ8 H8 H8 H 0 1 N N N N N N -9.447 11.860 -8.703 -4.397 1.392 -1.102 H8 A1IZ8 52 A1IZ8 H9 H9 H 0 1 N N N N N N -7.724 12.368 -8.717 -4.155 1.824 0.612 H9 A1IZ8 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IZ8 C8 C9 DOUB Y N 1 A1IZ8 C8 C7 SING Y N 2 A1IZ8 C9 C10 SING Y N 3 A1IZ8 C7 C6 DOUB Y N 4 A1IZ8 C10 O SING Y N 5 A1IZ8 C10 C12 DOUB Y N 6 A1IZ8 O C11 SING Y N 7 A1IZ8 C6 C12 SING Y N 8 A1IZ8 C6 C5 SING N N 9 A1IZ8 C12 N SING Y N 10 A1IZ8 F C SING N N 11 A1IZ8 C5 C DOUB Y N 12 A1IZ8 C5 C4 SING Y N 13 A1IZ8 C11 N DOUB Y N 14 A1IZ8 C C1 SING Y N 15 A1IZ8 C4 C3 DOUB Y N 16 A1IZ8 C1 C2 DOUB Y N 17 A1IZ8 C3 C2 SING Y N 18 A1IZ8 C3 C13 SING N N 19 A1IZ8 N1 C13 DOUB Y N 20 A1IZ8 N1 C14 SING Y N 21 A1IZ8 C2 F1 SING N N 22 A1IZ8 C13 N3 SING Y N 23 A1IZ8 C14 C15 SING N N 24 A1IZ8 C14 C17 DOUB Y N 25 A1IZ8 C15 N2 SING N N 26 A1IZ8 N3 C17 SING Y N 27 A1IZ8 N3 C18 SING N N 28 A1IZ8 C23 C24 SING N N 29 A1IZ8 C23 C22 SING N N 30 A1IZ8 C17 C16 SING N N 31 A1IZ8 N2 C22 SING N N 32 A1IZ8 N2 C16 SING N N 33 A1IZ8 N5 C18 DOUB Y N 34 A1IZ8 N5 C21 SING Y N 35 A1IZ8 C22 O1 DOUB N N 36 A1IZ8 C18 C19 SING Y N 37 A1IZ8 C21 N4 DOUB Y N 38 A1IZ8 C19 C20 DOUB Y N 39 A1IZ8 N4 C20 SING Y N 40 A1IZ8 C1 H1 SING N N 41 A1IZ8 C7 H2 SING N N 42 A1IZ8 C8 H3 SING N N 43 A1IZ8 C9 H4 SING N N 44 A1IZ8 C11 H5 SING N N 45 A1IZ8 C19 H10 SING N N 46 A1IZ8 C20 H11 SING N N 47 A1IZ8 C21 H12 SING N N 48 A1IZ8 C24 H13 SING N N 49 A1IZ8 C24 H14 SING N N 50 A1IZ8 C24 H15 SING N N 51 A1IZ8 C23 H16 SING N N 52 A1IZ8 C23 H17 SING N N 53 A1IZ8 C4 H18 SING N N 54 A1IZ8 C15 H6 SING N N 55 A1IZ8 C15 H7 SING N N 56 A1IZ8 C16 H8 SING N N 57 A1IZ8 C16 H9 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IZ8 InChI InChI 1.06 "InChI=1S/C25H18F2N6O2/c1-2-23(34)32-10-19-20(11-32)33(22-6-7-28-12-29-22)25(31-19)16-8-15(17(26)9-18(16)27)14-4-3-5-21-24(14)30-13-35-21/h3-9,12-13H,2,10-11H2,1H3" A1IZ8 InChIKey InChI 1.06 ZGOQCOSBGSMYAX-UHFFFAOYSA-N A1IZ8 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1Cc2nc(n(c2C1)c3ccncn3)c4cc(c(F)cc4F)c5cccc6ocnc56" A1IZ8 SMILES CACTVS 3.385 "CCC(=O)N1Cc2nc(n(c2C1)c3ccncn3)c4cc(c(F)cc4F)c5cccc6ocnc56" A1IZ8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1Cc2c(n(c(n2)c3cc(c(cc3F)F)c4cccc5c4nco5)c6ccncn6)C1" A1IZ8 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1Cc2c(n(c(n2)c3cc(c(cc3F)F)c4cccc5c4nco5)c6ccncn6)C1" # _pdbx_chem_comp_identifier.comp_id A1IZ8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[2-[5-(1,3-benzoxazol-4-yl)-2,4-bis(fluoranyl)phenyl]-3-pyrimidin-4-yl-4,6-dihydropyrrolo[3,4-d]imidazol-5-yl]propan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IZ8 "Create component" 2025-01-28 PDBE A1IZ8 "Modify PCM" 2025-01-28 PDBE A1IZ8 "Initial release" 2025-02-12 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IZ8 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C24 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #