data_A1IZ9 # _chem_comp.id A1IZ9 _chem_comp.name "1-[2-[5-fluoranyl-4-(2-fluorophenyl)pyridin-2-yl]-3-pyrimidin-4-yl-4,6-dihydropyrrolo[3,4-d]imidazol-5-yl]propan-1-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H18 F2 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-28 _chem_comp.pdbx_modified_date 2025-02-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 432.425 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IZ9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9GC6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IZ9 C1 C1 C 0 1 Y N N N N N 17.609 -21.163 16.415 -6.284 -2.279 -0.748 C1 A1IZ9 1 A1IZ9 C2 C2 C 0 1 Y N N N N N 17.668 -19.947 17.070 -6.427 -3.042 0.396 C2 A1IZ9 2 A1IZ9 C3 C3 C 0 1 Y N N N N N 17.489 -19.883 18.434 -5.554 -2.879 1.457 C3 A1IZ9 3 A1IZ9 C7 C4 C 0 1 Y N N N N N 15.961 -23.846 20.035 -1.953 -0.584 0.133 C7 A1IZ9 4 A1IZ9 C8 C5 C 0 1 Y N N N N N 15.960 -24.930 20.914 -0.958 0.386 0.038 C8 A1IZ9 5 A1IZ9 C9 C6 C 0 1 Y N N N N N 18.158 -25.391 20.497 -2.524 2.088 -0.024 C9 A1IZ9 6 A1IZ9 C10 C7 C 0 1 Y N N N N N 18.222 -24.354 19.612 -3.571 1.188 0.057 C10 A1IZ9 7 A1IZ9 C11 C8 C 0 1 Y N N N N N 14.694 -25.326 21.553 0.463 -0.022 0.021 C11 A1IZ9 8 A1IZ9 C12 C9 C 0 1 Y N N N N N 12.644 -25.966 21.777 2.249 -1.247 -0.028 C12 A1IZ9 9 A1IZ9 C13 C10 C 0 1 N N N N N N 11.213 -26.375 21.835 3.452 -2.157 -0.062 C13 A1IZ9 10 A1IZ9 C14 C11 C 0 1 N N N N N N 12.235 -26.678 23.993 4.168 0.078 0.015 C14 A1IZ9 11 A1IZ9 C15 C12 C 0 1 Y N N N N N 13.210 -26.115 23.012 2.662 0.033 0.015 C15 A1IZ9 12 A1IZ9 C16 C13 C 0 1 Y N N N N N 15.446 -25.642 23.976 1.503 2.214 0.090 C16 A1IZ9 13 A1IZ9 C19 C14 C 0 1 Y N N N N N 16.955 -24.464 25.155 0.797 4.157 1.098 C19 A1IZ9 14 A1IZ9 C20 C15 C 0 1 N N N N N N 9.924 -27.439 23.693 5.932 -1.719 -0.050 C20 A1IZ9 15 A1IZ9 C21 C16 C 0 1 N N N N N N 8.737 -27.573 22.755 6.252 -3.191 -0.101 C21 A1IZ9 16 A1IZ9 C22 C17 C 0 1 N N N N N N 7.440 -27.375 23.455 7.770 -3.383 -0.109 C22 A1IZ9 17 A1IZ9 O O1 O 0 1 N N N N N N 9.863 -27.822 24.853 6.830 -0.904 -0.023 O A1IZ9 18 A1IZ9 N2 N1 N 0 1 N N N N N N 11.035 -26.863 23.197 4.649 -1.308 -0.034 N2 A1IZ9 19 A1IZ9 N1 N2 N 0 1 Y N N N N N 13.566 -25.474 20.878 0.908 -1.257 -0.026 N1 A1IZ9 20 A1IZ9 N3 N3 N 0 1 Y N N N N N 14.523 -25.689 22.875 1.539 0.821 0.045 N3 A1IZ9 21 A1IZ9 N5 N4 N 0 1 Y N N N N N 16.221 -24.561 24.045 0.829 2.841 1.048 N5 A1IZ9 22 A1IZ9 N4 N5 N 0 1 Y N N N N N 17.017 -25.322 26.168 1.423 4.902 0.209 N4 A1IZ9 23 A1IZ9 C18 C18 C 0 1 Y N N N N N 16.241 -26.400 26.039 2.116 4.350 -0.776 C18 A1IZ9 24 A1IZ9 C17 C19 C 0 1 Y N N N N N 15.424 -26.626 24.952 2.177 2.972 -0.867 C17 A1IZ9 25 A1IZ9 N N6 N 0 1 Y N N N N N 17.043 -25.682 21.169 -1.273 1.675 -0.036 N A1IZ9 26 A1IZ9 F1 F1 F 0 1 N N N N N N 19.399 -24.105 18.991 -4.849 1.625 0.069 F1 A1IZ9 27 A1IZ9 C6 C20 C 0 1 Y N N N N N 17.140 -23.521 19.363 -3.289 -0.182 0.143 C6 A1IZ9 28 A1IZ9 C5 C21 C 0 1 Y N N N N N 17.212 -22.280 18.535 -4.384 -1.180 0.231 C5 A1IZ9 29 A1IZ9 C C22 C 0 1 Y N N N N N 17.396 -22.298 17.160 -5.266 -1.347 -0.837 C A1IZ9 30 A1IZ9 F F2 F 0 1 N N N N N N 17.443 -23.493 16.534 -5.127 -0.602 -1.955 F A1IZ9 31 A1IZ9 C4 C23 C 0 1 Y N N N N N 17.244 -21.035 19.163 -4.534 -1.953 1.380 C4 A1IZ9 32 A1IZ9 H1 H1 H 0 1 N N N N N N 17.728 -21.220 15.343 -6.966 -2.414 -1.574 H1 A1IZ9 33 A1IZ9 H2 H2 H 0 1 N N N N N N 17.855 -19.043 16.509 -7.224 -3.769 0.462 H2 A1IZ9 34 A1IZ9 H3 H3 H 0 1 N N N N N N 17.540 -18.929 18.938 -5.671 -3.478 2.348 H3 A1IZ9 35 A1IZ9 H4 H4 H 0 1 N N N N N N 15.063 -23.267 19.877 -1.695 -1.631 0.193 H4 A1IZ9 36 A1IZ9 H5 H5 H 0 1 N N N N N N 19.038 -25.995 20.658 -2.735 3.145 -0.086 H5 A1IZ9 37 A1IZ9 H8 H8 H 0 1 N N N N N N 17.573 -23.582 25.241 0.241 4.639 1.888 H8 A1IZ9 38 A1IZ9 H9 H9 H 0 1 N N N N N N 8.749 -28.579 22.310 5.828 -3.685 0.773 H9 A1IZ9 39 A1IZ9 H10 H10 H 0 1 N N N N N N 8.828 -26.819 21.959 5.826 -3.624 -1.006 H10 A1IZ9 40 A1IZ9 H11 H11 H 0 1 N N N N N N 6.615 -27.482 22.736 8.001 -4.448 -0.146 H11 A1IZ9 41 A1IZ9 H12 H12 H 0 1 N N N N N N 7.333 -28.128 24.249 8.194 -2.889 -0.983 H12 A1IZ9 42 A1IZ9 H13 H13 H 0 1 N N N N N N 7.413 -26.369 23.898 8.196 -2.950 0.796 H13 A1IZ9 43 A1IZ9 H14 H14 H 0 1 N N N N N N 16.254 -27.136 26.830 2.626 4.969 -1.500 H14 A1IZ9 44 A1IZ9 H15 H15 H 0 1 N N N N N N 14.809 -27.509 24.867 2.734 2.493 -1.659 H15 A1IZ9 45 A1IZ9 H16 H16 H 0 1 N N N N N N 17.076 -20.969 20.228 -3.854 -1.827 2.210 H16 A1IZ9 46 A1IZ9 H6 H6 H 0 1 N N N N N N 10.554 -25.517 21.639 3.444 -2.813 0.809 H6 A1IZ9 47 A1IZ9 H7 H7 H 0 1 N N N N N N 11.005 -27.171 21.105 3.441 -2.751 -0.975 H7 A1IZ9 48 A1IZ9 H17 H17 H 0 1 N N N N N N 12.592 -27.637 24.398 4.522 0.623 -0.860 H17 A1IZ9 49 A1IZ9 H18 H18 H 0 1 N N N N N N 12.056 -25.975 24.819 4.524 0.564 0.923 H18 A1IZ9 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IZ9 C1 C2 DOUB Y N 1 A1IZ9 C1 C SING Y N 2 A1IZ9 F C SING N N 3 A1IZ9 C2 C3 SING Y N 4 A1IZ9 C C5 DOUB Y N 5 A1IZ9 C3 C4 DOUB Y N 6 A1IZ9 C5 C4 SING Y N 7 A1IZ9 C5 C6 SING N N 8 A1IZ9 F1 C10 SING N N 9 A1IZ9 C6 C10 DOUB Y N 10 A1IZ9 C6 C7 SING Y N 11 A1IZ9 C10 C9 SING Y N 12 A1IZ9 C7 C8 DOUB Y N 13 A1IZ9 C9 N DOUB Y N 14 A1IZ9 N1 C11 DOUB Y N 15 A1IZ9 N1 C12 SING Y N 16 A1IZ9 C8 N SING Y N 17 A1IZ9 C8 C11 SING N N 18 A1IZ9 C11 N3 SING Y N 19 A1IZ9 C12 C13 SING N N 20 A1IZ9 C12 C15 DOUB Y N 21 A1IZ9 C13 N2 SING N N 22 A1IZ9 C21 C22 SING N N 23 A1IZ9 C21 C20 SING N N 24 A1IZ9 N3 C15 SING Y N 25 A1IZ9 N3 C16 SING N N 26 A1IZ9 C15 C14 SING N N 27 A1IZ9 N2 C20 SING N N 28 A1IZ9 N2 C14 SING N N 29 A1IZ9 C20 O DOUB N N 30 A1IZ9 C16 N5 DOUB Y N 31 A1IZ9 C16 C17 SING Y N 32 A1IZ9 N5 C19 SING Y N 33 A1IZ9 C17 C18 DOUB Y N 34 A1IZ9 C19 N4 DOUB Y N 35 A1IZ9 C18 N4 SING Y N 36 A1IZ9 C1 H1 SING N N 37 A1IZ9 C2 H2 SING N N 38 A1IZ9 C3 H3 SING N N 39 A1IZ9 C7 H4 SING N N 40 A1IZ9 C9 H5 SING N N 41 A1IZ9 C19 H8 SING N N 42 A1IZ9 C21 H9 SING N N 43 A1IZ9 C21 H10 SING N N 44 A1IZ9 C22 H11 SING N N 45 A1IZ9 C22 H12 SING N N 46 A1IZ9 C22 H13 SING N N 47 A1IZ9 C18 H14 SING N N 48 A1IZ9 C17 H15 SING N N 49 A1IZ9 C4 H16 SING N N 50 A1IZ9 C13 H6 SING N N 51 A1IZ9 C13 H7 SING N N 52 A1IZ9 C14 H17 SING N N 53 A1IZ9 C14 H18 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IZ9 InChI InChI 1.06 "InChI=1S/C23H18F2N6O/c1-2-22(32)30-11-19-20(12-30)31(21-7-8-26-13-28-21)23(29-19)18-9-15(17(25)10-27-18)14-5-3-4-6-16(14)24/h3-10,13H,2,11-12H2,1H3" A1IZ9 InChIKey InChI 1.06 PGZOHCVGSDIBJR-UHFFFAOYSA-N A1IZ9 SMILES_CANONICAL CACTVS 3.385 "CCC(=O)N1Cc2nc(n(c2C1)c3ccncn3)c4cc(c(F)cn4)c5ccccc5F" A1IZ9 SMILES CACTVS 3.385 "CCC(=O)N1Cc2nc(n(c2C1)c3ccncn3)c4cc(c(F)cn4)c5ccccc5F" A1IZ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1Cc2c(n(c(n2)c3cc(c(cn3)F)c4ccccc4F)c5ccncn5)C1" A1IZ9 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=O)N1Cc2c(n(c(n2)c3cc(c(cn3)F)c4ccccc4F)c5ccncn5)C1" # _pdbx_chem_comp_identifier.comp_id A1IZ9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[2-[5-fluoranyl-4-(2-fluorophenyl)pyridin-2-yl]-3-pyrimidin-4-yl-4,6-dihydropyrrolo[3,4-d]imidazol-5-yl]propan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IZ9 "Create component" 2025-01-28 PDBE A1IZ9 "Modify PCM" 2025-01-28 PDBE A1IZ9 "Initial release" 2025-02-12 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1IZ9 _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C22 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #