data_A1IZN # _chem_comp.id A1IZN _chem_comp.name "methyl 4-[4-[4-[[(6aS)-2-methoxy-11-oxidanylidene-6a,7,8,9-tetrahydropyrrolo[2,1-c][1,4]benzodiazepin-3-yl]oxy]butanoylamino]phenyl]furan-2-carboxylate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H29 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(5S)-N-[(1S,2R)-3-[(6-Benzothiazolylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)propyl]-2-oxo-3-[2-(trifluoromethyl)phenyl]oxazolidine-5-carboxamide" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-01-23 _chem_comp.pdbx_modified_date 2026-01-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 531.556 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1IZN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9I3G _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1IZN C1 C1 C 0 1 N N S N N N -52.092 61.500 28.603 -8.626 1.536 -0.718 C1 A1IZN 1 A1IZN C2 C2 C 0 1 N N N N N N -52.581 62.144 27.329 -7.796 2.150 0.377 C2 A1IZN 2 A1IZN C4 C3 C 0 1 Y N N N N N -50.572 63.201 26.757 -6.287 0.343 0.526 C4 A1IZN 3 A1IZN C5 C4 C 0 1 Y N N N N N -49.619 63.251 25.741 -4.891 0.232 0.457 C5 A1IZN 4 A1IZN C6 C5 C 0 1 Y N N N N N -48.383 63.830 25.960 -4.294 -0.972 0.141 C6 A1IZN 5 A1IZN C14 C6 C 0 1 Y N N N N N -47.486 64.619 17.931 3.830 1.553 0.431 C14 A1IZN 6 A1IZN C15 C7 C 0 1 Y N N N N N -47.304 65.996 17.975 4.650 2.560 -0.063 C15 A1IZN 7 A1IZN C16 C8 C 0 1 Y N N N N N -46.927 66.687 16.839 5.995 2.324 -0.255 C16 A1IZN 8 A1IZN C17 C9 C 0 1 Y N N N N N -46.723 66.021 15.634 6.531 1.074 0.046 C17 A1IZN 9 A1IZN C19 C10 C 0 1 Y N N N N N -46.042 66.271 13.195 8.902 1.701 -0.634 C19 A1IZN 10 A1IZN C21 C11 C 0 1 Y N N N N N -45.714 68.436 13.062 9.973 -0.174 -0.230 C21 A1IZN 11 A1IZN C25 C12 C 0 1 N N N N N N -45.133 72.035 12.693 13.336 -1.833 -0.350 C25 A1IZN 12 A1IZN C26 C13 C 0 1 Y N N N N N -46.090 68.169 14.335 8.666 -0.391 0.096 C26 A1IZN 13 A1IZN C29 C14 C 0 1 Y N N N N N -48.084 64.388 27.222 -5.080 -2.097 -0.115 C29 A1IZN 14 A1IZN C32 C15 C 0 1 Y N N N N N -49.024 64.337 28.233 -6.454 -2.003 -0.061 C32 A1IZN 15 A1IZN C33 C16 C 0 1 Y N N N N N -50.268 63.748 28.009 -7.074 -0.783 0.252 C33 A1IZN 16 A1IZN C34 C17 C 0 1 N N N N N N -51.172 63.754 29.202 -8.543 -0.752 0.269 C34 A1IZN 17 A1IZN C37 C18 C 0 1 N N N N N N -52.232 62.311 30.901 -10.698 0.441 -0.225 C37 A1IZN 18 A1IZN C38 C19 C 0 1 N N N N N N -53.448 61.444 30.679 -10.969 1.541 -1.318 C38 A1IZN 19 A1IZN C10 C20 C 0 1 N N N N N N -47.950 63.193 21.395 0.094 1.107 0.529 C10 A1IZN 20 A1IZN C11 C21 C 0 1 N N N N N N -47.390 64.128 20.356 1.568 0.816 0.415 C11 A1IZN 21 A1IZN C18 C22 C 0 1 Y N N N N N -46.304 66.762 14.425 7.979 0.817 -0.161 C18 A1IZN 22 A1IZN C22 C23 C 0 1 N N N N N N -45.368 69.710 12.400 11.057 -1.154 -0.124 C22 A1IZN 23 A1IZN C27 C24 C 0 1 Y N N N N N -46.908 64.643 15.597 5.708 0.065 0.541 C27 A1IZN 24 A1IZN C28 C25 C 0 1 Y N N N N N -47.286 63.948 16.731 4.363 0.306 0.732 C28 A1IZN 25 A1IZN C31 C26 C 0 1 N N N N N N -46.641 66.168 26.521 -5.356 -4.394 -0.666 C31 A1IZN 26 A1IZN C39 C27 C 0 1 N N N N N N -53.180 60.721 29.358 -9.768 2.499 -1.102 C39 A1IZN 27 A1IZN C8 C28 C 0 1 N N N N N N -47.578 62.979 23.868 -2.198 0.128 0.353 C8 A1IZN 28 A1IZN C9 C29 C 0 1 N N N N N N -48.035 63.876 22.750 -0.701 -0.167 0.237 C9 A1IZN 29 A1IZN N13 N1 N 0 1 N N N N N N -47.820 63.896 19.098 2.467 1.797 0.632 N13 A1IZN 30 A1IZN N3 N2 N 0 1 N N N N N N -51.794 62.589 26.419 -6.791 1.555 0.880 N3 A1IZN 31 A1IZN N36 N3 N 0 1 N N N N N N -51.786 62.601 29.534 -9.233 0.304 -0.186 N36 A1IZN 32 A1IZN O12 O1 O 0 1 N N N N N N -46.599 65.017 20.656 1.946 -0.300 0.127 O12 A1IZN 33 A1IZN O20 O2 O 0 1 Y N N N N N -45.677 67.275 12.336 10.094 1.094 -0.674 O20 A1IZN 34 A1IZN O23 O3 O 0 1 N N N N N N -45.051 69.808 11.241 10.825 -2.275 0.285 O23 A1IZN 35 A1IZN O24 O4 O 0 1 N N N N N N -45.452 70.738 13.244 12.312 -0.812 -0.481 O24 A1IZN 36 A1IZN O30 O5 O 0 1 N N N N N N -46.879 65.023 27.337 -4.490 -3.285 -0.416 O30 A1IZN 37 A1IZN O35 O6 O 0 1 N N N N N N -51.331 64.777 29.840 -9.150 -1.710 0.708 O35 A1IZN 38 A1IZN O7 O7 O 0 1 N N N N N N -47.379 63.797 25.029 -2.941 -1.062 0.080 O7 A1IZN 39 A1IZN H1 H1 H 0 1 N N N N N N -51.213 60.865 28.418 -8.007 1.313 -1.586 H1 A1IZN 40 A1IZN H2 H2 H 0 1 N N N N N N -53.646 62.235 27.176 -8.062 3.129 0.748 H2 A1IZN 41 A1IZN H5 H3 H 0 1 N N N N N N -49.849 62.833 24.772 -4.275 1.098 0.652 H5 A1IZN 42 A1IZN H15 H4 H 0 1 N N N N N N -47.458 66.529 18.902 4.233 3.529 -0.296 H15 A1IZN 43 A1IZN H16 H5 H 0 1 N N N N N N -46.789 67.757 16.887 6.631 3.107 -0.640 H16 A1IZN 44 A1IZN H19 H6 H 0 1 N N N N N N -46.111 65.228 12.924 8.703 2.720 -0.932 H19 A1IZN 45 A1IZN H25C H7 H 0 0 N N N N N N -45.236 72.802 13.475 13.403 -2.149 0.691 H25C A1IZN 46 A1IZN H25B H8 H 0 0 N N N N N N -44.099 72.030 12.319 13.077 -2.689 -0.974 H25B A1IZN 47 A1IZN H25A H9 H 0 0 N N N N N N -45.821 72.261 11.865 14.296 -1.428 -0.669 H25A A1IZN 48 A1IZN H26 H10 H 0 1 N N N N N N -46.206 68.887 15.133 8.239 -1.307 0.476 H26 A1IZN 49 A1IZN H32 H11 H 0 1 N N N N N N -48.794 64.755 29.202 -7.059 -2.875 -0.262 H32 A1IZN 50 A1IZN H37B H12 H 0 0 N N N N N N -51.457 61.770 31.464 -11.068 0.772 0.746 H37B A1IZN 51 A1IZN H37A H13 H 0 0 N N N N N N -52.496 63.235 31.436 -11.171 -0.500 -0.508 H37A A1IZN 52 A1IZN H38B H14 H 0 0 N N N N N N -53.563 60.721 31.500 -10.949 1.109 -2.319 H38B A1IZN 53 A1IZN H38A H15 H 0 0 N N N N N N -54.355 62.062 30.605 -11.914 2.051 -1.133 H38A A1IZN 54 A1IZN H10B H16 H 0 0 N N N N N N -47.297 62.312 21.476 -0.131 1.452 1.539 H10B A1IZN 55 A1IZN H10A H17 H 0 0 N N N N N N -48.957 62.875 21.088 -0.181 1.880 -0.189 H10A A1IZN 56 A1IZN H27 H18 H 0 1 N N N N N N -46.754 64.109 14.671 6.122 -0.905 0.775 H27 A1IZN 57 A1IZN H28 H19 H 0 1 N N N N N N -47.426 62.878 16.684 3.725 -0.476 1.117 H28 A1IZN 58 A1IZN H31B H20 H 0 0 N N N N N N -45.636 66.563 26.727 -5.965 -4.586 0.217 H31B A1IZN 59 A1IZN H31C H21 H 0 0 N N N N N N -46.712 65.884 25.461 -6.004 -4.166 -1.512 H31C A1IZN 60 A1IZN H31A H22 H 0 0 N N N N N N -47.392 66.940 26.745 -4.759 -5.277 -0.894 H31A A1IZN 61 A1IZN H39B H23 H 0 0 N N N N N N -52.835 59.696 29.557 -9.973 3.198 -0.291 H39B A1IZN 62 A1IZN H39A H24 H 0 0 N N N N N N -54.101 60.688 28.757 -9.529 3.033 -2.022 H39A A1IZN 63 A1IZN H8B H25 H 0 1 N N N N N N -46.635 62.486 23.591 -2.423 0.473 1.362 H8B A1IZN 64 A1IZN H8A H26 H 0 1 N N N N N N -48.344 62.217 24.074 -2.473 0.900 -0.365 H8A A1IZN 65 A1IZN H9A H27 H 0 1 N N N N N N -49.079 64.168 22.935 -0.476 -0.512 -0.772 H9A A1IZN 66 A1IZN H9B H28 H 0 1 N N N N N N -47.400 64.774 22.734 -0.426 -0.940 0.955 H9B A1IZN 67 A1IZN H13 H29 H 0 1 N N N N N N -48.446 63.125 18.978 2.169 2.671 0.927 H13 A1IZN 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1IZN C1 C2 SING N N 1 A1IZN C2 N3 DOUB N N 2 A1IZN N3 C4 SING N N 3 A1IZN C4 C5 SING Y N 4 A1IZN C5 C6 DOUB Y N 5 A1IZN C6 O7 SING N N 6 A1IZN O7 C8 SING N N 7 A1IZN C8 C9 SING N N 8 A1IZN C9 C10 SING N N 9 A1IZN C10 C11 SING N N 10 A1IZN C11 O12 DOUB N N 11 A1IZN C11 N13 SING N N 12 A1IZN N13 C14 SING N N 13 A1IZN C14 C15 DOUB Y N 14 A1IZN C15 C16 SING Y N 15 A1IZN C16 C17 DOUB Y N 16 A1IZN C17 C18 SING N N 17 A1IZN C18 C19 DOUB Y N 18 A1IZN C19 O20 SING Y N 19 A1IZN O20 C21 SING Y N 20 A1IZN C21 C22 SING N N 21 A1IZN C22 O23 DOUB N N 22 A1IZN C22 O24 SING N N 23 A1IZN O24 C25 SING N N 24 A1IZN C21 C26 DOUB Y N 25 A1IZN C17 C27 SING Y N 26 A1IZN C27 C28 DOUB Y N 27 A1IZN C6 C29 SING Y N 28 A1IZN C29 O30 SING N N 29 A1IZN O30 C31 SING N N 30 A1IZN C29 C32 DOUB Y N 31 A1IZN C32 C33 SING Y N 32 A1IZN C33 C34 SING N N 33 A1IZN C34 O35 DOUB N N 34 A1IZN C34 N36 SING N N 35 A1IZN N36 C37 SING N N 36 A1IZN C37 C38 SING N N 37 A1IZN C38 C39 SING N N 38 A1IZN C26 C18 SING Y N 39 A1IZN C28 C14 SING Y N 40 A1IZN C33 C4 DOUB Y N 41 A1IZN N36 C1 SING N N 42 A1IZN C39 C1 SING N N 43 A1IZN C1 H1 SING N N 44 A1IZN C2 H2 SING N N 45 A1IZN C5 H5 SING N N 46 A1IZN C15 H15 SING N N 47 A1IZN C16 H16 SING N N 48 A1IZN C19 H19 SING N N 49 A1IZN C25 H25C SING N N 50 A1IZN C25 H25B SING N N 51 A1IZN C25 H25A SING N N 52 A1IZN C26 H26 SING N N 53 A1IZN C32 H32 SING N N 54 A1IZN C37 H37B SING N N 55 A1IZN C37 H37A SING N N 56 A1IZN C38 H38B SING N N 57 A1IZN C38 H38A SING N N 58 A1IZN C10 H10B SING N N 59 A1IZN C10 H10A SING N N 60 A1IZN C27 H27 SING N N 61 A1IZN C28 H28 SING N N 62 A1IZN C31 H31B SING N N 63 A1IZN C31 H31C SING N N 64 A1IZN C31 H31A SING N N 65 A1IZN C39 H39B SING N N 66 A1IZN C39 H39A SING N N 67 A1IZN C8 H8B SING N N 68 A1IZN C8 H8A SING N N 69 A1IZN C9 H9A SING N N 70 A1IZN C9 H9B SING N N 71 A1IZN N13 H13 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1IZN InChI InChI 1.06 "InChI=1S/C29H29N3O7/c1-36-24-14-22-23(30-16-21-5-3-11-32(21)28(22)34)15-25(24)38-12-4-6-27(33)31-20-9-7-18(8-10-20)19-13-26(39-17-19)29(35)37-2/h7-10,13-17,21H,3-6,11-12H2,1-2H3,(H,31,33)/t21-/m0/s1" A1IZN InChIKey InChI 1.06 SBCBEBUCXIOICC-NRFANRHFSA-N A1IZN SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1occ(c1)c2ccc(NC(=O)CCCOc3cc4N=C[C@@H]5CCCN5C(=O)c4cc3OC)cc2" A1IZN SMILES CACTVS 3.385 "COC(=O)c1occ(c1)c2ccc(NC(=O)CCCOc3cc4N=C[CH]5CCCN5C(=O)c4cc3OC)cc2" A1IZN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1OCCCC(=O)Nc3ccc(cc3)c4cc(oc4)C(=O)OC)N=C[C@@H]5CCCN5C2=O" A1IZN SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1OCCCC(=O)Nc3ccc(cc3)c4cc(oc4)C(=O)OC)N=CC5CCCN5C2=O" # _pdbx_chem_comp_identifier.comp_id A1IZN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 4-[4-[4-[[(6~{a}~{S})-2-methoxy-11-oxidanylidene-6~{a},7,8,9-tetrahydropyrrolo[2,1-c][1,4]benzodiazepin-3-yl]oxy]butanoylamino]phenyl]furan-2-carboxylate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1IZN "Create component" 2025-01-23 PDBE A1IZN "Modify coordinates" 2025-02-07 PDBE A1IZN "Initial release" 2026-02-04 RCSB #