data_A1J29 # _chem_comp.id A1J29 _chem_comp.name "[(3S,6E,10E,14E)-3,7,11,15,19-pentamethylicosa-6,10,14,18-tetraenyl] phosphono hydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H46 O7 P2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-03-26 _chem_comp.pdbx_modified_date 2026-08-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 520.576 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1J29 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 29MQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1J29 C1 C1 C 0 1 N N N N N N -5.779 -11.133 -23.681 -12.215 -1.939 1.757 C1 A1J29 1 A1J29 C2 C2 C 0 1 N N N N N N -5.070 -9.977 -24.334 -13.044 -1.512 0.573 C2 A1J29 2 A1J29 C3 C3 C 0 1 N N N N N N -3.736 -9.659 -23.732 -14.458 -2.010 0.425 C3 A1J29 3 A1J29 C4 C4 C 0 1 N N N N N N -5.541 -9.272 -25.357 -12.534 -0.709 -0.328 C4 A1J29 4 A1J29 C5 C5 C 0 1 N N N N N N -6.844 -9.405 -26.086 -11.081 -0.317 -0.252 C5 A1J29 5 A1J29 C6 C6 C 0 1 N N N N N N -7.716 -8.189 -25.804 -10.395 -0.643 -1.580 C6 A1J29 6 A1J29 C7 C7 C 0 1 N N N N N N -8.110 -8.148 -24.348 -8.942 -0.251 -1.504 C7 A1J29 7 A1J29 C8 C8 C 0 1 N N N N N N -9.232 -9.082 -23.979 -8.527 1.166 -1.804 C8 A1J29 8 A1J29 C9 C9 C 0 1 N N N N N N -7.458 -7.371 -23.482 -8.039 -1.143 -1.178 C9 A1J29 9 A1J29 C10 C10 C 0 1 N N N N N N -7.633 -7.272 -21.998 -6.606 -0.724 -0.972 C10 A1J29 10 A1J29 C11 C11 C 0 1 N N N N N N -6.287 -7.207 -21.268 -6.135 -1.179 0.410 C11 A1J29 11 A1J29 C12 C12 C 0 1 N N N N N N -6.427 -6.625 -19.884 -4.702 -0.760 0.616 C12 A1J29 12 A1J29 C13 C13 C 0 1 N N N N N N -7.133 -7.517 -18.893 -3.582 -1.630 0.106 C13 A1J29 13 A1J29 C14 C14 C 0 1 N N N N N N -5.972 -5.399 -19.615 -4.430 0.360 1.237 C14 A1J29 14 A1J29 C15 C15 C 0 1 N N N N N N -6.076 -4.614 -18.342 -3.004 0.836 1.343 C15 A1J29 15 A1J29 C16 C16 C 0 1 N N N N N N -6.627 -3.207 -18.568 -2.898 2.259 0.789 C16 A1J29 16 A1J29 C17 C17 C 0 1 N N N N N N -7.800 -3.146 -19.520 -1.473 2.734 0.894 C17 A1J29 17 A1J29 C18 C18 C 0 1 N N N N N N -9.012 -3.921 -19.075 -0.978 3.352 2.176 C18 A1J29 18 A1J29 C19 C19 C 0 1 N N N N N N -7.737 -2.438 -20.651 -0.663 2.611 -0.129 C19 A1J29 19 A1J29 C20 C20 C 0 1 N N N N N N -8.829 -2.172 -21.649 0.790 2.983 0.012 C20 A1J29 20 A1J29 C21 C21 C 0 1 N N N N N N -8.293 -1.836 -23.043 1.661 1.771 -0.327 C21 A1J29 21 A1J29 C22 C22 C 0 1 N N S N N N -8.127 -2.942 -24.107 3.137 2.148 -0.184 C22 A1J29 22 A1J29 C23 C23 C 0 1 N N N N N N -8.747 -4.282 -23.696 3.496 3.208 -1.228 C23 A1J29 23 A1J29 C24 C24 C 0 1 N N N N N N -6.660 -3.078 -24.496 4.004 0.906 -0.401 C24 A1J29 24 A1J29 C25 C25 C 0 1 N N N N N N -6.304 -3.742 -25.811 5.470 1.255 -0.136 C25 A1J29 25 A1J29 O1 O1 O 0 1 N N N N N N -7.001 -3.245 -26.895 6.280 0.095 -0.338 O1 A1J29 26 A1J29 P1 P1 P 0 1 N N N N N N -6.557 -1.913 -27.657 7.878 0.097 -0.147 P1 A1J29 27 A1J29 O2 O2 O 0 1 N N N N N N -5.679 -1.050 -26.827 8.549 1.061 -1.249 O2 A1J29 28 A1J29 O3 O3 O 0 1 N N N N N N -6.147 -2.203 -29.056 8.212 0.590 1.208 O3 A1J29 29 A1J29 O4 O4 O 0 1 N N N N N N -8.016 -1.260 -27.657 8.443 -1.400 -0.328 O4 A1J29 30 A1J29 P2 P2 P 0 1 N N N N N N -9.340 -1.599 -28.520 9.800 -2.144 0.115 P2 A1J29 31 A1J29 O5 O5 O 0 1 N N N N N N -9.615 -0.318 -29.297 9.605 -3.737 -0.016 O5 A1J29 32 A1J29 O6 O6 O 0 1 N N N N N N -10.428 -1.951 -27.517 11.007 -1.671 -0.839 O6 A1J29 33 A1J29 O7 O7 O 0 1 N N N N N N -8.981 -2.768 -29.419 10.116 -1.800 1.519 O7 A1J29 34 A1J29 H1 H1 H 0 1 N N N N N N -5.160 -11.528 -22.862 -12.830 -2.527 2.438 H1 A1J29 35 A1J29 H2 H2 H 0 1 N N N N N N -6.744 -10.791 -23.279 -11.375 -2.542 1.414 H2 A1J29 36 A1J29 H3 H3 H 0 1 N N N N N N -5.951 -11.925 -24.425 -11.842 -1.056 2.276 H3 A1J29 37 A1J29 H4 H4 H 0 1 N N N N N N -3.532 -10.353 -22.903 -14.704 -2.662 1.263 H4 A1J29 38 A1J29 H5 H5 H 0 1 N N N N N N -2.954 -9.763 -24.498 -15.143 -1.161 0.411 H5 A1J29 39 A1J29 H6 H6 H 0 1 N N N N N N -3.742 -8.627 -23.352 -14.552 -2.566 -0.508 H6 A1J29 40 A1J29 H7 H7 H 0 1 N N N N N N -4.890 -8.489 -25.716 -13.156 -0.327 -1.124 H7 A1J29 41 A1J29 H8 H8 H 0 1 N N N N N N -7.362 -10.314 -25.746 -11.003 0.753 -0.056 H8 A1J29 42 A1J29 H9 H9 H 0 1 N N N N N N -6.653 -9.475 -27.167 -10.597 -0.870 0.553 H9 A1J29 43 A1J29 H10 H10 H 0 1 N N N N N N -7.156 -7.276 -26.053 -10.473 -1.712 -1.776 H10 A1J29 44 A1J29 H11 H11 H 0 1 N N N N N N -8.624 -8.243 -26.423 -10.879 -0.090 -2.385 H11 A1J29 45 A1J29 H12 H12 H 0 1 N N N N N N -9.451 -8.986 -22.905 -9.394 1.735 -2.141 H12 A1J29 46 A1J29 H13 H13 H 0 1 N N N N N N -10.129 -8.825 -24.561 -8.121 1.625 -0.902 H13 A1J29 47 A1J29 H14 H14 H 0 1 N N N N N N -8.935 -10.118 -24.201 -7.767 1.165 -2.585 H14 A1J29 48 A1J29 H15 H15 H 0 1 N N N N N N -6.703 -6.727 -23.908 -8.322 -2.178 -1.056 H15 A1J29 49 A1J29 H16 H16 H 0 1 N N N N N N -8.207 -6.363 -21.767 -5.981 -1.181 -1.738 H16 A1J29 50 A1J29 H17 H17 H 0 1 N N N N N N -8.187 -8.155 -21.645 -6.531 0.362 -1.042 H17 A1J29 51 A1J29 H18 H18 H 0 1 N N N N N N -5.877 -8.224 -21.186 -6.760 -0.722 1.177 H18 A1J29 52 A1J29 H19 H19 H 0 1 N N N N N N -5.596 -6.579 -21.850 -6.210 -2.264 0.480 H19 A1J29 53 A1J29 H20 H20 H 0 1 N N N N N N -7.187 -7.011 -17.918 -3.999 -2.480 -0.435 H20 A1J29 54 A1J29 H21 H21 H 0 1 N N N N N N -8.150 -7.731 -19.252 -2.947 -1.050 -0.563 H21 A1J29 55 A1J29 H22 H22 H 0 1 N N N N N N -6.576 -8.460 -18.787 -2.990 -1.991 0.947 H22 A1J29 56 A1J29 H23 H23 H 0 1 N N N N N N -5.458 -4.905 -20.426 -5.227 0.943 1.674 H23 A1J29 57 A1J29 H24 H24 H 0 1 N N N N N N -6.745 -5.148 -17.651 -2.695 0.830 2.388 H24 A1J29 58 A1J29 H25 H25 H 0 1 N N N N N N -5.075 -4.533 -17.894 -2.356 0.174 0.769 H25 A1J29 59 A1J29 H26 H26 H 0 1 N N N N N N -5.819 -2.582 -18.976 -3.207 2.265 -0.257 H26 A1J29 60 A1J29 H27 H27 H 0 1 N N N N N N -6.949 -2.803 -17.597 -3.546 2.921 1.363 H27 A1J29 61 A1J29 H28 H28 H 0 1 N N N N N N -8.801 -4.412 -18.114 -1.765 3.308 2.929 H28 A1J29 62 A1J29 H29 H29 H 0 1 N N N N N N -9.863 -3.234 -18.957 -0.105 2.804 2.531 H29 A1J29 63 A1J29 H30 H30 H 0 1 N N N N N N -9.257 -4.683 -19.830 -0.705 4.392 1.997 H30 A1J29 64 A1J29 H31 H31 H 0 1 N N N N N N -6.776 -2.000 -20.878 -1.038 2.243 -1.072 H31 A1J29 65 A1J29 H32 H32 H 0 1 N N N N N N -9.433 -1.325 -21.291 1.024 3.800 -0.671 H32 A1J29 66 A1J29 H33 H33 H 0 1 N N N N N N -9.463 -3.068 -21.723 0.988 3.297 1.036 H33 A1J29 67 A1J29 H34 H34 H 0 1 N N N N N N -7.300 -1.386 -22.899 1.428 0.954 0.355 H34 A1J29 68 A1J29 H35 H35 H 0 1 N N N N N N -8.976 -1.087 -23.471 1.464 1.457 -1.352 H35 A1J29 69 A1J29 H36 H36 H 0 1 N N N N N N -8.666 -2.603 -25.003 3.316 2.546 0.814 H36 A1J29 70 A1J29 H37 H37 H 0 1 N N N N N N -9.802 -4.131 -23.426 3.317 2.810 -2.227 H37 A1J29 71 A1J29 H38 H38 H 0 1 N N N N N N -8.682 -4.989 -24.536 2.878 4.093 -1.074 H38 A1J29 72 A1J29 H39 H39 H 0 1 N N N N N N -8.202 -4.688 -22.831 4.547 3.477 -1.126 H39 A1J29 73 A1J29 H40 H40 H 0 1 N N N N N N -6.168 -3.657 -23.700 3.689 0.119 0.284 H40 A1J29 74 A1J29 H41 H41 H 0 1 N N N N N N -6.239 -2.062 -24.524 3.893 0.560 -1.429 H41 A1J29 75 A1J29 H42 H42 H 0 1 N N N N N N -6.518 -4.818 -25.725 5.786 2.042 -0.821 H42 A1J29 76 A1J29 H43 H43 H 0 1 N N N N N N -5.229 -3.595 -25.993 5.581 1.601 0.891 H43 A1J29 77 A1J29 H44 H44 H 0 1 N N N N N N -4.924 -0.782 -27.337 8.372 0.797 -2.163 H44 A1J29 78 A1J29 H45 H45 H 0 1 N N N N N N -9.511 -0.482 -30.227 10.385 -4.251 0.235 H45 A1J29 79 A1J29 H46 H46 H 0 1 N N N N N N -10.690 -2.856 -27.638 10.868 -1.865 -1.776 H46 A1J29 80 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1J29 O7 P2 DOUB N N 1 A1J29 O5 P2 SING N N 2 A1J29 O3 P1 DOUB N N 3 A1J29 P2 O4 SING N N 4 A1J29 P2 O6 SING N N 5 A1J29 O4 P1 SING N N 6 A1J29 P1 O1 SING N N 7 A1J29 P1 O2 SING N N 8 A1J29 O1 C25 SING N N 9 A1J29 C5 C6 SING N N 10 A1J29 C5 C4 SING N N 11 A1J29 C25 C24 SING N N 12 A1J29 C6 C7 SING N N 13 A1J29 C4 C2 DOUB N N 14 A1J29 C24 C22 SING N N 15 A1J29 C7 C8 SING N N 16 A1J29 C7 C9 DOUB N E 17 A1J29 C2 C3 SING N N 18 A1J29 C2 C1 SING N N 19 A1J29 C22 C23 SING N N 20 A1J29 C22 C21 SING N N 21 A1J29 C9 C10 SING N N 22 A1J29 C21 C20 SING N N 23 A1J29 C10 C11 SING N N 24 A1J29 C20 C19 SING N N 25 A1J29 C11 C12 SING N N 26 A1J29 C19 C17 DOUB N E 27 A1J29 C12 C14 DOUB N E 28 A1J29 C12 C13 SING N N 29 A1J29 C14 C15 SING N N 30 A1J29 C17 C18 SING N N 31 A1J29 C17 C16 SING N N 32 A1J29 C16 C15 SING N N 33 A1J29 C1 H1 SING N N 34 A1J29 C1 H2 SING N N 35 A1J29 C1 H3 SING N N 36 A1J29 C3 H4 SING N N 37 A1J29 C3 H5 SING N N 38 A1J29 C3 H6 SING N N 39 A1J29 C4 H7 SING N N 40 A1J29 C5 H8 SING N N 41 A1J29 C5 H9 SING N N 42 A1J29 C6 H10 SING N N 43 A1J29 C6 H11 SING N N 44 A1J29 C8 H12 SING N N 45 A1J29 C8 H13 SING N N 46 A1J29 C8 H14 SING N N 47 A1J29 C9 H15 SING N N 48 A1J29 C10 H16 SING N N 49 A1J29 C10 H17 SING N N 50 A1J29 C11 H18 SING N N 51 A1J29 C11 H19 SING N N 52 A1J29 C13 H20 SING N N 53 A1J29 C13 H21 SING N N 54 A1J29 C13 H22 SING N N 55 A1J29 C14 H23 SING N N 56 A1J29 C15 H24 SING N N 57 A1J29 C15 H25 SING N N 58 A1J29 C16 H26 SING N N 59 A1J29 C16 H27 SING N N 60 A1J29 C18 H28 SING N N 61 A1J29 C18 H29 SING N N 62 A1J29 C18 H30 SING N N 63 A1J29 C19 H31 SING N N 64 A1J29 C20 H32 SING N N 65 A1J29 C20 H33 SING N N 66 A1J29 C21 H34 SING N N 67 A1J29 C21 H35 SING N N 68 A1J29 C22 H36 SING N N 69 A1J29 C23 H37 SING N N 70 A1J29 C23 H38 SING N N 71 A1J29 C23 H39 SING N N 72 A1J29 C24 H40 SING N N 73 A1J29 C24 H41 SING N N 74 A1J29 C25 H42 SING N N 75 A1J29 C25 H43 SING N N 76 A1J29 O2 H44 SING N N 77 A1J29 O5 H45 SING N N 78 A1J29 O6 H46 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1J29 InChI InChI 1.06 "InChI=1S/C25H46O7P2/c1-21(2)11-7-12-22(3)13-8-14-23(4)15-9-16-24(5)17-10-18-25(6)19-20-31-34(29,30)32-33(26,27)28/h11,13,15,17,25H,7-10,12,14,16,18-20H2,1-6H3,(H,29,30)(H2,26,27,28)/b22-13+,23-15+,24-17+/t25-/m0/s1" A1J29 InChIKey InChI 1.06 MXGLYEVGJRXBTP-ZJAFRZKZSA-N A1J29 SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCO[P](O)(=O)O[P](O)(O)=O)CC\C=C(C)\CC/C=C(C)/CC/C=C(C)/CCC=C(C)C" A1J29 SMILES CACTVS 3.385 "C[CH](CCO[P](O)(=O)O[P](O)(O)=O)CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C" A1J29 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](CC/C=C(\C)/CC/C=C(\C)/CC/C=C(\C)/CCC=C(C)C)CCOP(=O)(O)OP(=O)(O)O" A1J29 SMILES "OpenEye OEToolkits" 2.0.7 "CC(CCC=C(C)CCC=C(C)CCC=C(C)CCC=C(C)C)CCOP(=O)(O)OP(=O)(O)O" # _pdbx_chem_comp_identifier.comp_id A1J29 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{S},6~{E},10~{E},14~{E})-3,7,11,15,19-pentamethylicosa-6,10,14,18-tetraenyl] phosphono hydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1J29 "Create component" 2026-03-26 PDBE A1J29 "Initial release" 2026-09-02 RCSB #