data_A1J6Q # _chem_comp.id A1J6Q _chem_comp.name "2-(2-(2-methoxyethoxy)ethoxy)ethyl hydrogen (4-benzylphenyl)phosphoramidate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H28 N O6 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-[2-(2-methoxyethoxy)ethoxy]ethoxy-~{N}-[4-(phenylmethyl)phenyl]phosphonamidic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-05-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 409.413 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1J6Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 30GV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1J6Q N1 N1 N 0 1 N N N N N N -2.044 -50.146 20.498 0.033 2.862 1.472 N1 A1J6Q 1 A1J6Q C4 C1 C 0 1 Y N N N N N -3.736 -53.256 19.548 1.935 -0.268 1.772 C4 A1J6Q 2 A1J6Q C5 C2 C 0 1 Y N N N N N -2.807 -52.232 19.590 1.291 0.905 2.114 C5 A1J6Q 3 A1J6Q C6 C3 C 0 1 Y N N N N N -2.980 -51.169 20.465 0.686 1.676 1.130 C6 A1J6Q 4 A1J6Q C7 C4 C 0 1 N N N N N N -5.868 -54.375 20.325 2.686 -1.953 0.081 C7 A1J6Q 5 A1J6Q C8 C5 C 0 1 Y N N N N N -5.477 -55.527 21.225 4.131 -1.660 -0.231 C8 A1J6Q 6 A1J6Q C10 C6 C 0 1 Y N N N N N -6.043 -57.187 22.878 6.403 -1.433 0.489 C10 A1J6Q 7 A1J6Q C13 C7 C 0 1 Y N N N N N -4.181 -56.018 21.227 4.509 -1.345 -1.523 C13 A1J6Q 8 A1J6Q C15 C8 C 0 1 N N N N N N 1.107 -49.929 17.368 -3.909 1.759 -0.814 C15 A1J6Q 9 A1J6Q C17 C9 C 0 1 N N N N N N 2.485 -48.401 15.247 -3.209 -1.694 -2.033 C17 A1J6Q 10 A1J6Q C20 C10 C 0 1 N N N N N N 2.751 -45.666 11.861 -4.099 -5.173 2.209 C20 A1J6Q 11 A1J6Q C1 C11 C 0 1 Y N N N N N -4.096 -51.147 21.292 0.730 1.264 -0.196 C1 A1J6Q 12 A1J6Q C11 C12 C 0 1 Y N N N N N -4.751 -57.655 22.866 6.782 -1.124 -0.804 C11 A1J6Q 13 A1J6Q C12 C13 C 0 1 Y N N N N N -3.818 -57.074 22.045 5.834 -1.077 -1.809 C12 A1J6Q 14 A1J6Q C14 C14 C 0 1 N N N N N N 0.006 -50.046 18.378 -3.078 2.602 0.157 C14 A1J6Q 15 A1J6Q C16 C15 C 0 1 N N N N N N 1.445 -49.460 15.045 -3.974 -0.376 -1.902 C16 A1J6Q 16 A1J6Q C18 C16 C 0 1 N N N N N N 2.902 -48.526 12.924 -2.514 -3.621 -0.788 C18 A1J6Q 17 A1J6Q C19 C17 C 0 1 N N N N N N 2.376 -48.001 11.621 -2.575 -4.253 0.604 C19 A1J6Q 18 A1J6Q C2 C18 C 0 1 Y N N N N N -5.013 -52.182 21.241 1.376 0.090 -0.531 C2 A1J6Q 19 A1J6Q C3 C19 C 0 1 Y N N N N N -4.857 -53.250 20.368 1.982 -0.672 0.451 C3 A1J6Q 20 A1J6Q C9 C20 C 0 1 Y N N N N N -6.404 -56.130 22.059 5.077 -1.702 0.775 C9 A1J6Q 21 A1J6Q O1 O1 O 0 1 N N N N N N -0.633 -48.804 18.762 -1.812 2.899 -0.435 O1 A1J6Q 22 A1J6Q O2 O2 O 0 1 N N N N N N 0.548 -49.484 16.143 -3.275 0.493 -1.008 O2 A1J6Q 23 A1J6Q O3 O3 O 0 1 N N N N N N 2.594 -47.687 14.026 -3.206 -2.371 -0.774 O3 A1J6Q 24 A1J6Q O4 O4 O 0 1 N N N N N N -3.135 -48.916 18.560 -1.303 4.963 0.926 O4 A1J6Q 25 A1J6Q O5 O5 O 0 1 N N N N N N 3.030 -46.847 11.136 -3.930 -4.575 0.922 O5 A1J6Q 26 A1J6Q P1 P1 P 0 1 N N N N N N -2.026 -48.793 19.561 -0.681 3.771 0.308 P1 A1J6Q 27 A1J6Q H12 H1 H 0 1 N N N N N N -2.064 -49.808 21.439 -0.001 3.147 2.399 H12 A1J6Q 28 A1J6Q H3 H2 H 0 1 N N N N N N -3.586 -54.078 18.863 2.406 -0.868 2.537 H3 A1J6Q 29 A1J6Q H4 H3 H 0 1 N N N N N N -1.945 -52.260 18.940 1.258 1.222 3.146 H4 A1J6Q 30 A1J6Q H5 H4 H 0 1 N N N N N N -6.845 -53.987 20.650 2.207 -2.391 -0.794 H5 A1J6Q 31 A1J6Q H6 H5 H 0 1 N N N N N N -5.945 -54.743 19.291 2.629 -2.652 0.915 H6 A1J6Q 32 A1J6Q H8 H6 H 0 1 N N N N N N -6.777 -57.643 23.526 7.143 -1.470 1.274 H8 A1J6Q 33 A1J6Q H11 H7 H 0 1 N N N N N N -3.442 -55.569 20.580 3.768 -1.308 -2.308 H11 A1J6Q 34 A1J6Q H16 H8 H 0 1 N N N N N N 1.857 -49.205 17.719 -4.906 1.607 -0.401 H16 A1J6Q 35 A1J6Q H17 H9 H 0 1 N N N N N N 1.584 -50.910 17.224 -3.986 2.276 -1.770 H17 A1J6Q 36 A1J6Q H20 H10 H 0 1 N N N N N N 2.179 -47.721 16.056 -3.693 -2.322 -2.782 H20 A1J6Q 37 A1J6Q H21 H11 H 0 1 N N N N N N 3.450 -48.863 15.502 -2.183 -1.490 -2.338 H21 A1J6Q 38 A1J6Q H26 H12 H 0 1 N N N N N N 3.300 -44.823 11.415 -3.742 -4.488 2.978 H26 A1J6Q 39 A1J6Q H27 H13 H 0 1 N N N N N N 1.671 -45.460 11.825 -5.155 -5.387 2.375 H27 A1J6Q 40 A1J6Q H28 H14 H 0 1 N N N N N N 3.065 -45.795 12.907 -3.528 -6.101 2.256 H28 A1J6Q 41 A1J6Q H1 H15 H 0 1 N N N N N N -4.248 -50.323 21.974 0.257 1.858 -0.963 H1 A1J6Q 42 A1J6Q H9 H16 H 0 1 N N N N N N -4.470 -58.481 23.503 7.818 -0.918 -1.029 H9 A1J6Q 43 A1J6Q H10 H17 H 0 1 N N N N N N -2.802 -57.440 22.037 6.129 -0.831 -2.819 H10 A1J6Q 44 A1J6Q H14 H18 H 0 1 N N N N N N 0.428 -50.503 19.285 -3.605 3.531 0.374 H14 A1J6Q 45 A1J6Q H15 H19 H 0 1 N N N N N N -0.767 -50.708 17.960 -2.926 2.046 1.082 H15 A1J6Q 46 A1J6Q H18 H20 H 0 1 N N N N N N 1.937 -50.440 14.957 -4.052 0.097 -2.881 H18 A1J6Q 47 A1J6Q H19 H21 H 0 1 N N N N N N 0.884 -49.247 14.123 -4.972 -0.572 -1.512 H19 A1J6Q 48 A1J6Q H22 H22 H 0 1 N N N N N N 3.996 -48.618 12.849 -1.473 -3.457 -1.067 H22 A1J6Q 49 A1J6Q H23 H23 H 0 1 N N N N N N 2.462 -49.518 13.105 -2.983 -4.288 -1.511 H23 A1J6Q 50 A1J6Q H24 H24 H 0 1 N N N N N N 2.479 -48.795 10.866 -1.973 -5.161 0.618 H24 A1J6Q 51 A1J6Q H25 H25 H 0 1 N N N N N N 1.311 -47.759 11.755 -2.186 -3.549 1.340 H25 A1J6Q 52 A1J6Q H2 H26 H 0 1 N N N N N N -5.871 -52.158 21.896 1.411 -0.232 -1.562 H2 A1J6Q 53 A1J6Q H7 H27 H 0 1 N N N N N N -7.423 -55.771 22.071 4.781 -1.943 1.786 H7 A1J6Q 54 A1J6Q O6 O6 O 0 1 N Y N N N N -2.215 -48.148 20.964 0.427 4.238 -0.763 O6 A1J6Q 55 A1J6Q H13 H28 H 0 1 N Y N N N N -3.116 -47.862 21.063 0.877 3.506 -1.208 H13 A1J6Q 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1J6Q C1 C2 DOUB Y N 1 A1J6Q C2 C3 SING Y N 2 A1J6Q C3 C4 DOUB Y N 3 A1J6Q C4 C5 SING Y N 4 A1J6Q C5 C6 DOUB Y N 5 A1J6Q C1 C6 SING Y N 6 A1J6Q C3 C7 SING N N 7 A1J6Q C7 C8 SING N N 8 A1J6Q C8 C9 DOUB Y N 9 A1J6Q C9 C10 SING Y N 10 A1J6Q C10 C11 DOUB Y N 11 A1J6Q C11 C12 SING Y N 12 A1J6Q C12 C13 DOUB Y N 13 A1J6Q C8 C13 SING Y N 14 A1J6Q C6 N1 SING N N 15 A1J6Q N1 P1 SING N N 16 A1J6Q P1 O1 SING N N 17 A1J6Q O1 C14 SING N N 18 A1J6Q C14 C15 SING N N 19 A1J6Q C15 O2 SING N N 20 A1J6Q O2 C16 SING N N 21 A1J6Q C16 C17 SING N N 22 A1J6Q C17 O3 SING N N 23 A1J6Q P1 O4 DOUB N N 24 A1J6Q O3 C18 SING N N 25 A1J6Q C18 C19 SING N N 26 A1J6Q C19 O5 SING N N 27 A1J6Q O5 C20 SING N N 28 A1J6Q N1 H12 SING N N 29 A1J6Q C4 H3 SING N N 30 A1J6Q C5 H4 SING N N 31 A1J6Q C7 H5 SING N N 32 A1J6Q C7 H6 SING N N 33 A1J6Q C10 H8 SING N N 34 A1J6Q C13 H11 SING N N 35 A1J6Q C15 H16 SING N N 36 A1J6Q C15 H17 SING N N 37 A1J6Q C17 H20 SING N N 38 A1J6Q C17 H21 SING N N 39 A1J6Q C20 H26 SING N N 40 A1J6Q C20 H27 SING N N 41 A1J6Q C20 H28 SING N N 42 A1J6Q C1 H1 SING N N 43 A1J6Q C11 H9 SING N N 44 A1J6Q C12 H10 SING N N 45 A1J6Q C14 H14 SING N N 46 A1J6Q C14 H15 SING N N 47 A1J6Q C16 H18 SING N N 48 A1J6Q C16 H19 SING N N 49 A1J6Q C18 H22 SING N N 50 A1J6Q C18 H23 SING N N 51 A1J6Q C19 H24 SING N N 52 A1J6Q C19 H25 SING N N 53 A1J6Q C2 H2 SING N N 54 A1J6Q C9 H7 SING N N 55 A1J6Q P1 O6 SING N N 56 A1J6Q O6 H13 SING N N 57 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1J6Q InChI InChI 1.06 "InChI=1S/C20H28NO6P/c1-24-11-12-25-13-14-26-15-16-27-28(22,23)21-20-9-7-19(8-10-20)17-18-5-3-2-4-6-18/h2-10H,11-17H2,1H3,(H2,21,22,23)" A1J6Q InChIKey InChI 1.06 QQKLUCNUKCIKGI-UHFFFAOYSA-N A1J6Q SMILES_CANONICAL CACTVS 3.385 "COCCOCCOCCO[P](O)(=O)Nc1ccc(Cc2ccccc2)cc1" A1J6Q SMILES CACTVS 3.385 "COCCOCCOCCO[P](O)(=O)Nc1ccc(Cc2ccccc2)cc1" A1J6Q SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COCCOCCOCCO[P@@](=O)(Nc1ccc(cc1)Cc2ccccc2)O" A1J6Q SMILES "OpenEye OEToolkits" 2.0.7 "COCCOCCOCCOP(=O)(Nc1ccc(cc1)Cc2ccccc2)O" # _pdbx_chem_comp_identifier.comp_id A1J6Q _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[2-(2-methoxyethoxy)ethoxy]ethoxy-~{N}-[4-(phenylmethyl)phenyl]phosphonamidic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1J6Q "Create component" 2026-05-01 PDBE A1J6Q "Modify PCM" 2026-05-01 PDBE A1J6Q "Initial release" 2026-11-04 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1J6Q _pdbx_chem_comp_synonyms.name "2-[2-(2-methoxyethoxy)ethoxy]ethoxy-~{N}-[4-(phenylmethyl)phenyl]phosphonamidic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1J6Q _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom P1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #