data_A1JA0 # _chem_comp.id A1JA0 _chem_comp.name "4-[6-methoxy-5-[[6-methoxy-2-(4-oxidanyl-4-oxidanylidene-butanoyl)-1-benzothiophen-5-yl]sulfanylmethylsulfanyl]-1-benzothiophen-2-yl]-4-oxidanylidene-butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H24 O8 S4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-14 _chem_comp.pdbx_modified_date 2025-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 604.735 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JA0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QVT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JA0 C1 C1 C 0 1 N N N N N N 44.221 2.745 20.463 -1.583 4.557 -1.488 C1 A1JA0 1 A1JA0 C3 C2 C 0 1 Y N N N N N 42.316 3.080 19.062 -2.031 2.586 -0.237 C3 A1JA0 2 A1JA0 C4 C3 C 0 1 Y N N N N N 42.357 4.452 19.232 -3.325 2.652 -0.706 C4 A1JA0 3 A1JA0 C7 C4 C 0 1 Y N N N N N 40.159 6.992 17.361 -6.127 0.084 0.231 C7 A1JA0 4 A1JA0 C8 C5 C 0 1 N N N N N N 39.601 8.274 16.943 -7.324 -0.657 0.385 C8 A1JA0 5 A1JA0 C11 C6 C 0 1 N N N N N N 39.321 8.920 14.549 -9.718 -1.182 0.010 C11 A1JA0 6 A1JA0 C12 C7 C 0 1 N N N N N N 39.750 7.933 13.485 -10.973 -0.741 -0.698 C12 A1JA0 7 A1JA0 C15 C8 C 0 1 Y N N N N N 39.833 5.744 16.944 -4.958 -0.222 0.817 C15 A1JA0 8 A1JA0 C16 C9 C 0 1 Y N N N N N 40.591 4.703 17.577 -3.895 0.645 0.532 C16 A1JA0 9 A1JA0 C17 C10 C 0 1 Y N N N N N 40.564 3.318 17.418 -2.556 0.586 0.995 C17 A1JA0 10 A1JA0 C18 C11 C 0 1 Y N N N N N 41.419 2.502 18.153 -1.648 1.544 0.619 C18 A1JA0 11 A1JA0 C20 C12 C 0 1 N N N N N N 43.110 0.394 17.317 -0.003 -0.022 2.254 C20 A1JA0 12 A1JA0 C22 C13 C 0 1 Y N N N N N 43.598 2.559 15.591 1.652 -1.570 0.612 C22 A1JA0 13 A1JA0 C24 C14 C 0 1 Y N N N N N 44.497 4.719 16.208 3.897 -0.663 0.538 C24 A1JA0 14 A1JA0 C25 C15 C 0 1 Y N N N N N 45.298 5.727 16.846 4.953 0.212 0.824 C25 A1JA0 15 A1JA0 O2 O1 O 0 1 N N N N N N 43.129 2.206 19.725 -1.125 3.527 -0.609 O2 A1JA0 16 A1JA0 C5 C16 C 0 1 Y N N N N N 41.498 5.249 18.490 -4.265 1.688 -0.328 C5 A1JA0 17 A1JA0 S6 S1 S 0 1 Y N N N N N 41.421 6.981 18.563 -5.967 1.530 -0.750 S6 A1JA0 18 A1JA0 O9 O2 O 0 1 N N N N N N 39.892 9.308 17.524 -7.338 -1.648 1.087 O9 A1JA0 19 A1JA0 C10 C17 C 0 1 N N N N N N 38.673 8.284 15.760 -8.579 -0.216 -0.322 C10 A1JA0 20 A1JA0 O13 O3 O 0 1 N N N N N N 40.175 6.823 13.844 -12.108 -1.444 -0.553 O13 A1JA0 21 A1JA0 O14 O4 O 0 1 N N N N N N 39.670 8.307 12.296 -10.959 0.245 -1.396 O14 A1JA0 22 A1JA0 S19 S2 S 0 1 N N N N N N 41.444 0.747 17.918 0.009 1.465 1.215 S19 A1JA0 23 A1JA0 S21 S3 S 0 1 N N N N N N 43.598 0.792 15.628 -0.008 -1.497 1.198 S21 A1JA0 24 A1JA0 C23 C18 C 0 1 Y N N N N N 44.534 3.326 16.280 2.558 -0.616 1.004 C23 A1JA0 25 A1JA0 C26 C19 C 0 1 Y N N N N N 44.922 7.002 16.562 6.123 -0.082 0.236 C26 A1JA0 26 A1JA0 C27 C20 C 0 1 N N N N N N 45.456 8.282 17.024 7.314 0.668 0.390 C27 A1JA0 27 A1JA0 O28 O5 O 0 1 N N N N N N 44.995 9.337 16.614 7.322 1.656 1.096 O28 A1JA0 28 A1JA0 C29 C21 C 0 1 N N N N N N 46.574 8.267 18.033 8.571 0.241 -0.322 C29 A1JA0 29 A1JA0 C30 C22 C 0 1 N N N N N N 46.135 8.766 19.399 9.703 1.215 0.012 C30 A1JA0 30 A1JA0 C31 C23 C 0 1 N N N N N N 45.272 7.804 20.190 10.960 0.788 -0.700 C31 A1JA0 31 A1JA0 O32 O6 O 0 1 N N N N N N 45.006 6.690 19.706 10.953 -0.195 -1.402 O32 A1JA0 32 A1JA0 O33 O7 O 0 1 N N N N N N 44.865 8.199 21.305 12.089 1.499 -0.553 O33 A1JA0 33 A1JA0 S34 S4 S 0 1 Y N N N N N 43.553 7.051 15.482 5.973 -1.526 -0.750 S34 A1JA0 34 A1JA0 C35 C24 C 0 1 Y N N N N N 43.502 5.318 15.429 4.273 -1.699 -0.326 C35 A1JA0 35 A1JA0 C36 C25 C 0 1 Y N N N N N 42.565 4.566 14.737 3.339 -2.667 -0.710 C36 A1JA0 36 A1JA0 C37 C26 C 0 1 Y N N N N N 42.614 3.188 14.820 2.043 -2.605 -0.249 C37 A1JA0 37 A1JA0 O38 O8 O 0 1 N N N N N N 41.719 2.352 14.215 1.142 -3.549 -0.628 O38 A1JA0 38 A1JA0 C39 C27 C 0 1 N N N N N N 40.489 2.910 13.767 1.608 -4.576 -1.506 C39 A1JA0 39 A1JA0 H1 H1 H 0 1 N N N N N N 44.782 1.927 20.939 -2.396 5.105 -1.013 H1 A1JA0 40 A1JA0 H2 H2 H 0 1 N N N N N N 44.886 3.298 19.783 -0.762 5.241 -1.706 H2 A1JA0 41 A1JA0 H3 H3 H 0 1 N N N N N N 43.839 3.427 21.237 -1.939 4.110 -2.417 H3 A1JA0 42 A1JA0 H4 H4 H 0 1 N N N N N N 43.048 4.897 19.933 -3.615 3.454 -1.369 H4 A1JA0 43 A1JA0 H5 H5 H 0 1 N N N N N N 40.210 9.474 14.884 -9.889 -1.185 1.086 H5 A1JA0 44 A1JA0 H6 H6 H 0 1 N N N N N N 38.601 9.620 14.100 -9.449 -2.186 -0.319 H6 A1JA0 45 A1JA0 H7 H7 H 0 1 N N N N N N 39.072 5.551 16.203 -4.845 -1.079 1.464 H7 A1JA0 46 A1JA0 H8 H8 H 0 1 N N N N N N 39.873 2.874 16.717 -2.252 -0.210 1.658 H8 A1JA0 47 A1JA0 H9 H9 H 0 1 N N N N N N 43.262 -0.689 17.438 0.885 -0.031 2.886 H9 A1JA0 48 A1JA0 H10 H10 H 0 1 N N N N N N 43.801 0.938 17.978 -0.895 -0.021 2.881 H10 A1JA0 49 A1JA0 H11 H11 H 0 1 N N N N N N 46.128 5.492 17.496 4.833 1.066 1.474 H11 A1JA0 50 A1JA0 H12 H12 H 0 1 N N N N N N 37.768 8.853 16.021 -8.847 0.788 0.006 H12 A1JA0 51 A1JA0 H13 H13 H 0 1 N N N N N N 38.397 7.248 15.514 -8.408 -0.213 -1.399 H13 A1JA0 52 A1JA0 H14 H14 H 0 1 N N N N N N 40.424 6.316 13.080 -12.887 -1.122 -1.026 H14 A1JA0 53 A1JA0 H15 H15 H 0 1 N N N N N N 45.294 2.840 16.874 2.249 0.176 1.671 H15 A1JA0 54 A1JA0 H16 H16 H 0 1 N N N N N N 46.942 7.235 18.136 8.849 -0.762 0.001 H16 A1JA0 55 A1JA0 H17 H17 H 0 1 N N N N N N 47.387 8.911 17.667 8.398 0.241 -1.398 H17 A1JA0 56 A1JA0 H18 H18 H 0 1 N N N N N N 47.038 8.978 19.990 9.426 2.219 -0.310 H18 A1JA0 57 A1JA0 H19 H19 H 0 1 N N N N N N 45.564 9.695 19.255 9.877 1.215 1.089 H19 A1JA0 58 A1JA0 H20 H20 H 0 1 N N N N N N 44.333 7.522 21.707 12.870 1.186 -1.030 H20 A1JA0 59 A1JA0 H21 H21 H 0 1 N N N N N N 41.807 5.051 14.141 3.635 -3.466 -1.373 H21 A1JA0 60 A1JA0 H22 H22 H 0 1 N N N N N N 39.876 2.123 13.304 1.968 -4.126 -2.431 H22 A1JA0 61 A1JA0 H23 H23 H 0 1 N N N N N N 39.948 3.340 14.623 2.421 -5.122 -1.027 H23 A1JA0 62 A1JA0 H24 H24 H 0 1 N N N N N N 40.692 3.699 13.028 0.791 -5.262 -1.730 H24 A1JA0 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JA0 O14 C12 DOUB N N 1 A1JA0 C12 O13 SING N N 2 A1JA0 C12 C11 SING N N 3 A1JA0 C39 O38 SING N N 4 A1JA0 O38 C37 SING N N 5 A1JA0 C11 C10 SING N N 6 A1JA0 C36 C37 DOUB Y N 7 A1JA0 C36 C35 SING Y N 8 A1JA0 C37 C22 SING Y N 9 A1JA0 C35 S34 SING Y N 10 A1JA0 C35 C24 DOUB Y N 11 A1JA0 S34 C26 SING Y N 12 A1JA0 C22 S21 SING N N 13 A1JA0 C22 C23 DOUB Y N 14 A1JA0 S21 C20 SING N N 15 A1JA0 C10 C8 SING N N 16 A1JA0 C24 C23 SING Y N 17 A1JA0 C24 C25 SING Y N 18 A1JA0 C26 C25 DOUB Y N 19 A1JA0 C26 C27 SING N N 20 A1JA0 O28 C27 DOUB N N 21 A1JA0 C8 C7 SING N N 22 A1JA0 C8 O9 DOUB N N 23 A1JA0 C15 C7 DOUB Y N 24 A1JA0 C15 C16 SING Y N 25 A1JA0 C27 C29 SING N N 26 A1JA0 C20 S19 SING N N 27 A1JA0 C7 S6 SING Y N 28 A1JA0 C17 C16 DOUB Y N 29 A1JA0 C17 C18 SING Y N 30 A1JA0 C16 C5 SING Y N 31 A1JA0 S19 C18 SING N N 32 A1JA0 C29 C30 SING N N 33 A1JA0 C18 C3 DOUB Y N 34 A1JA0 C5 S6 SING Y N 35 A1JA0 C5 C4 DOUB Y N 36 A1JA0 C3 C4 SING Y N 37 A1JA0 C3 O2 SING N N 38 A1JA0 C30 C31 SING N N 39 A1JA0 O32 C31 DOUB N N 40 A1JA0 O2 C1 SING N N 41 A1JA0 C31 O33 SING N N 42 A1JA0 C1 H1 SING N N 43 A1JA0 C1 H2 SING N N 44 A1JA0 C1 H3 SING N N 45 A1JA0 C4 H4 SING N N 46 A1JA0 C11 H5 SING N N 47 A1JA0 C11 H6 SING N N 48 A1JA0 C15 H7 SING N N 49 A1JA0 C17 H8 SING N N 50 A1JA0 C20 H9 SING N N 51 A1JA0 C20 H10 SING N N 52 A1JA0 C25 H11 SING N N 53 A1JA0 C10 H12 SING N N 54 A1JA0 C10 H13 SING N N 55 A1JA0 O13 H14 SING N N 56 A1JA0 C23 H15 SING N N 57 A1JA0 C29 H16 SING N N 58 A1JA0 C29 H17 SING N N 59 A1JA0 C30 H18 SING N N 60 A1JA0 C30 H19 SING N N 61 A1JA0 O33 H20 SING N N 62 A1JA0 C36 H21 SING N N 63 A1JA0 C39 H22 SING N N 64 A1JA0 C39 H23 SING N N 65 A1JA0 C39 H24 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JA0 InChI InChI 1.06 "InChI=1S/C27H24O8S4/c1-34-18-11-20-14(7-22(38-20)16(28)3-5-26(30)31)9-24(18)36-13-37-25-10-15-8-23(17(29)4-6-27(32)33)39-21(15)12-19(25)35-2/h7-12H,3-6,13H2,1-2H3,(H,30,31)(H,32,33)" A1JA0 InChIKey InChI 1.06 NGJBOFBFUVNHEM-UHFFFAOYSA-N A1JA0 SMILES_CANONICAL CACTVS 3.385 "COc1cc2sc(cc2cc1SCSc3cc4cc(sc4cc3OC)C(=O)CCC(O)=O)C(=O)CCC(O)=O" A1JA0 SMILES CACTVS 3.385 "COc1cc2sc(cc2cc1SCSc3cc4cc(sc4cc3OC)C(=O)CCC(O)=O)C(=O)CCC(O)=O" A1JA0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1SCSc3cc4cc(sc4cc3OC)C(=O)CCC(=O)O)cc(s2)C(=O)CCC(=O)O" A1JA0 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1SCSc3cc4cc(sc4cc3OC)C(=O)CCC(=O)O)cc(s2)C(=O)CCC(=O)O" # _pdbx_chem_comp_identifier.comp_id A1JA0 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[6-methoxy-5-[[6-methoxy-2-(4-oxidanyl-4-oxidanylidene-butanoyl)-1-benzothiophen-5-yl]sulfanylmethylsulfanyl]-1-benzothiophen-2-yl]-4-oxidanylidene-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JA0 "Create component" 2025-04-14 PDBE A1JA0 "Initial release" 2025-09-24 RCSB #