data_A1JAQ # _chem_comp.id A1JAQ _chem_comp.name 1-amino-1,6-dideoxy-beta-L-galacto-hexopyranose _chem_comp.type "L-saccharide, beta linking" _chem_comp.pdbx_type ATOMS _chem_comp.formula "C6 H13 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "1-amino-1-deoxy-b-L-fucopyranoside; beta-L-fucopyranosylamine" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-04-09 _chem_comp.pdbx_modified_date 2025-04-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 163.172 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JAQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9G3L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JAQ N1 N1 N 0 1 N N N N N N 13.030 -2.282 -23.660 -1.507 2.297 0.480 N1 A1JAQ 1 A1JAQ C1 C10 C 0 1 N N S N N N 12.379 -1.189 -23.057 -0.740 1.275 -0.245 C1 A1JAQ 2 A1JAQ O5 O2 O 0 1 N N N N N N 11.726 -0.429 -24.075 0.649 1.419 0.056 O5 A1JAQ 3 A1JAQ C5 C11 C 0 1 N N S N N N 11.209 0.822 -23.568 1.493 0.485 -0.621 C5 A1JAQ 4 A1JAQ C6 C12 C 0 1 N N N N N N 10.687 1.535 -24.716 2.952 0.750 -0.246 C6 A1JAQ 5 A1JAQ C4 C13 C 0 1 N N S N N N 10.171 0.482 -22.474 1.110 -0.939 -0.209 C4 A1JAQ 6 A1JAQ O4 O3 O 0 1 N N N N N N 8.998 -0.102 -23.060 1.323 -1.103 1.195 O4 A1JAQ 7 A1JAQ C3 C14 C 0 1 N N R N N N 10.746 -0.460 -21.453 -0.368 -1.176 -0.533 C3 A1JAQ 8 A1JAQ O3 O4 O 0 1 N N N N N N 9.658 -0.822 -20.515 -0.753 -2.477 -0.084 O3 A1JAQ 9 A1JAQ C2 C15 C 0 1 N N S N N N 11.312 -1.679 -22.076 -1.213 -0.117 0.182 C2 A1JAQ 10 A1JAQ O2 O5 O 0 1 N N N N N N 11.826 -2.562 -21.072 -2.587 -0.284 -0.171 O2 A1JAQ 11 A1JAQ HO1 H7 H 0 1 N N N N N N 13.492 -2.824 -22.958 -1.214 3.225 0.215 HO1 A1JAQ 12 A1JAQ H1 H8 H 0 1 N N N N N N 13.100 -0.560 -22.514 -0.894 1.398 -1.317 H1 A1JAQ 13 A1JAQ H5 H9 H 0 1 N N N N N N 12.022 1.402 -23.108 1.368 0.598 -1.698 H5 A1JAQ 14 A1JAQ H61 H10 H 0 1 N N N N N N 10.276 2.503 -24.392 3.076 0.637 0.831 H61 A1JAQ 15 A1JAQ H62 H11 H 0 1 N N N N N N 11.497 1.705 -25.441 3.595 0.038 -0.762 H62 A1JAQ 16 A1JAQ H4 H13 H 0 1 N N N N N N 9.896 1.418 -21.967 1.722 -1.654 -0.757 H4 A1JAQ 17 A1JAQ HO4 H14 H 0 1 N Y N N N N 8.370 -0.305 -22.377 2.239 -0.962 1.472 HO4 A1JAQ 18 A1JAQ H3 H15 H 0 1 N N N N N N 11.540 0.061 -20.898 -0.522 -1.101 -1.609 H3 A1JAQ 19 A1JAQ HO3 H16 H 0 1 N Y N N N N 9.993 -1.419 -19.856 -1.679 -2.695 -0.257 HO3 A1JAQ 20 A1JAQ H2 H17 H 0 1 N N N N N N 10.523 -2.188 -22.648 -1.097 -0.226 1.261 H2 A1JAQ 21 A1JAQ HO2 H18 H 0 1 N Y N N N N 11.121 -2.831 -20.495 -3.181 0.358 0.243 HO2 A1JAQ 22 A1JAQ H6 H6 H 0 1 N N N N N N 12.357 -2.852 -24.132 -2.498 2.176 0.335 H6 A1JAQ 23 A1JAQ H7 H13 H 0 1 N N N N N N 9.892 0.939 -25.187 3.224 1.764 -0.538 H7 A1JAQ 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JAQ C6 C5 SING N N 1 A1JAQ O5 C5 SING N N 2 A1JAQ O5 C1 SING N N 3 A1JAQ N1 C1 SING N N 4 A1JAQ C5 C4 SING N N 5 A1JAQ O4 C4 SING N N 6 A1JAQ C1 C2 SING N N 7 A1JAQ C4 C3 SING N N 8 A1JAQ C2 C3 SING N N 9 A1JAQ C2 O2 SING N N 10 A1JAQ C3 O3 SING N N 11 A1JAQ N1 HO1 SING N N 12 A1JAQ C1 H1 SING N N 13 A1JAQ C5 H5 SING N N 14 A1JAQ C6 H61 SING N N 15 A1JAQ C6 H62 SING N N 16 A1JAQ C4 H4 SING N N 17 A1JAQ O4 HO4 SING N N 18 A1JAQ C3 H3 SING N N 19 A1JAQ O3 HO3 SING N N 20 A1JAQ C2 H2 SING N N 21 A1JAQ O2 HO2 SING N N 22 A1JAQ N1 H6 SING N N 23 A1JAQ C6 H7 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JAQ InChI InChI 1.06 "InChI=1S/C6H13NO4/c1-2-3(8)4(9)5(10)6(7)11-2/h2-6,8-10H,7H2,1H3/t2-,3+,4+,5-,6-/m0/s1" A1JAQ InChIKey InChI 1.06 UTVXFQMLZSPQLB-KGJVWPDLSA-N A1JAQ SMILES_CANONICAL CACTVS 3.385 "C[C@@H]1O[C@H](N)[C@@H](O)[C@H](O)[C@@H]1O" A1JAQ SMILES CACTVS 3.385 "C[CH]1O[CH](N)[CH](O)[CH](O)[CH]1O" A1JAQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@H]([C@H]([C@@H]([C@H](O1)N)O)O)O" A1JAQ SMILES "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)N)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1JAQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},3~{S},4~{R},5~{S},6~{S})-2-azanyl-6-methyl-oxane-3,4,5-triol" # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 A1JAQ 1-amino-1-deoxy-b-L-fucopyranoside PUBCHEM ? 2 A1JAQ beta-L-fucopyranosylamine PUBCHEM ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JAQ "Create component" 2025-04-09 PDBE A1JAQ "Initial release" 2025-04-16 RCSB # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support A1JAQ "CARBOHYDRATE ISOMER" L PDB ? A1JAQ "CARBOHYDRATE RING" pyranose PDB ? A1JAQ "CARBOHYDRATE ANOMER" beta PDB ? #