data_A1JBS # _chem_comp.id A1JBS _chem_comp.name "[(2~{R},3~{S},4~{R},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-6-[(2~{R},3~{R},4~{S},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,5-bis(oxidanyl)-6-[2-[4-[2,2,2-tris(fluoranyl)ethanoylamino]phenyl]ethoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxan-3-yl] dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H35 F3 N O17 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "Meropenem, bound form" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-02 _chem_comp.pdbx_modified_date 2026-02-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 697.500 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JBS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QW4 _chem_comp.pdbx_subcomponent_list "GM0 GMH A1JAY" _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JBS P P1 P 0 1 N N N N N N 28.881 26.885 -32.125 -7.568 2.121 -0.961 P GM0 1 A1JBS C11 C8 C 0 1 N N S N N N 29.380 22.256 -29.030 -3.597 -0.579 1.835 C1 GM0 2 A1JBS O22 O16 O 0 1 N N N N N N 27.750 27.690 -32.689 -8.759 1.921 0.104 O1A GM0 3 A1JBS C21 C9 C 0 1 N N S N N N 30.079 23.579 -28.758 -5.058 -0.742 2.263 C2 GM0 4 A1JBS O21 O9 O 0 1 N N N N N N 31.348 23.466 -29.399 -5.381 0.246 3.244 O2 GM0 5 A1JBS C31 C12 C 0 1 N N R N N N 29.312 24.777 -29.315 -5.963 -0.565 1.040 C3 GM0 6 A1JBS O31 O10 O 0 1 N N N N N N 30.147 25.929 -29.179 -7.332 -0.642 1.443 O3 GM0 7 A1JBS C41 C13 C 0 1 N N S N N N 29.026 24.572 -30.783 -5.690 0.804 0.411 C4 GM0 8 A1JBS O41 O11 O 0 1 N N N N N N 28.365 25.723 -31.259 -6.478 0.951 -0.773 O4 GM0 9 A1JBS C51 C14 C 0 1 N N R N N N 28.302 23.234 -30.981 -4.205 0.907 0.054 C5 GM0 10 A1JBS O51 O12 O 0 1 N N N N N N 29.082 22.142 -30.429 -3.419 0.703 1.230 O5 GM0 11 A1JBS C61 C15 C 0 1 N N S N N N 27.994 22.901 -32.428 -3.913 2.295 -0.520 C6 GM0 12 A1JBS O61 O13 O 0 1 N N N N N N 29.231 22.768 -33.147 -4.347 3.294 0.404 O6 GM0 13 A1JBS C71 C16 C 0 1 N N N N N N 27.192 21.577 -32.472 -2.409 2.441 -0.760 C7 GM0 14 A1JBS O71 O14 O 0 1 N N N N N N 25.922 21.684 -31.821 -2.149 3.690 -1.403 O7 GM0 15 A1JBS O42 O17 O 0 1 N N N N N N 29.711 27.737 -31.098 -8.167 2.061 -2.454 O8 GM0 16 A1JBS O11 O15 O 0 1 N N N N N N 29.835 26.347 -33.205 -6.925 3.435 -0.740 O9 GM0 17 A1JBS C1 C1 C 0 1 N N S N N N 26.205 19.115 -28.277 -0.056 -0.925 -0.945 C1 GMH 18 A1JBS C2 C2 C 0 1 N N S N N N 26.791 20.426 -28.826 -1.537 -0.772 -0.587 C2 GMH 19 A1JBS C3 C3 C 0 1 N N S N N N 27.756 21.010 -27.797 -1.863 -1.682 0.601 C3 GMH 20 A1JBS C4 C4 C 0 1 N N R N N N 27.025 21.182 -26.474 -1.498 -3.125 0.240 C4 GMH 21 A1JBS C5 C5 C 0 1 N N R N N N 26.420 19.884 -25.990 -0.019 -3.187 -0.150 C5 GMH 22 A1JBS C6 C11 C 0 1 N N S N N N 25.567 20.116 -24.756 0.338 -4.614 -0.569 C6 GMH 23 A1JBS C7 C6 C 0 1 N N N N N N 25.126 18.762 -24.224 1.781 -4.650 -1.077 C7 GMH 24 A1JBS O2 O4 O 0 1 N N N N N N 25.700 21.311 -29.143 -2.340 -1.145 -1.709 O2 GMH 25 A1JBS O3 O5 O 0 1 N N N N N N 28.193 22.215 -28.193 -3.259 -1.601 0.895 O3 GMH 26 A1JBS O4 O6 O 0 1 N N N N N N 27.886 21.685 -25.461 -1.731 -3.973 1.367 O4 GMH 27 A1JBS O5 O7 O 0 1 N N N N N N 25.537 19.376 -27.004 0.222 -2.295 -1.240 O5 GMH 28 A1JBS O6 O1 O 0 1 N N N N N N 24.408 20.919 -25.003 -0.543 -5.040 -1.610 O6 GMH 29 A1JBS O7 O8 O 0 1 N N N N N N 24.047 18.829 -23.262 2.154 -6.001 -1.359 O7 GMH 30 A1JBS O12 O2 O 0 1 N N N N N N 31.517 20.446 -22.974 8.461 2.638 0.517 O1 A1JAY 31 A1JBS C12 C17 C 0 1 N N N N N N 31.432 19.254 -22.736 9.074 1.666 0.130 C1 A1JAY 32 A1JBS N1 N1 N 0 1 N N N N N N 30.313 18.510 -22.763 8.424 0.508 -0.102 N1 A1JAY 33 A1JBS C22 C10 C 0 1 Y N N N N N 29.741 17.887 -23.901 7.061 0.399 0.195 C2 A1JAY 34 A1JBS C32 C18 C 0 1 Y N N N N N 28.651 17.026 -23.801 6.221 1.492 0.022 C3 A1JAY 35 A1JBS C42 C19 C 0 1 Y N N N N N 28.134 16.440 -24.948 4.877 1.381 0.316 C4 A1JAY 36 A1JBS C52 C20 C 0 1 Y N N N N N 28.686 16.677 -26.201 4.366 0.184 0.783 C5 A1JAY 37 A1JBS C62 C21 C 0 1 N N N N N N 28.102 16.071 -27.455 2.898 0.067 1.103 C6 A1JAY 38 A1JBS C72 C22 C 0 1 N N N N N N 26.941 16.860 -28.004 2.139 -0.391 -0.145 C7 A1JAY 39 A1JBS O1 O3 O 0 1 N N N N N N 27.297 18.246 -28.171 0.747 -0.502 0.158 O2 A1JAY 40 A1JBS C8 C23 C 0 1 Y N N N N N 29.776 17.533 -26.283 5.199 -0.906 0.957 C8 A1JAY 41 A1JBS C9 C7 C 0 1 Y N N N N N 30.304 18.133 -25.150 6.544 -0.803 0.659 C9 A1JAY 42 A1JBS C10 C24 C 0 1 N N N N N N 32.736 18.486 -22.384 10.562 1.752 -0.092 C10 A1JAY 43 A1JBS F1 F1 F 0 1 N N N N N N 33.650 18.612 -23.361 10.852 1.464 -1.430 F1 A1JAY 44 A1JBS F2 F2 F 0 1 N N N N N N 32.559 17.172 -22.178 11.005 3.043 0.214 F2 A1JAY 45 A1JBS F3 F3 F 0 1 N N N N N N 33.292 18.959 -21.262 11.211 0.828 0.735 F3 A1JAY 46 A1JBS H10 H10 H 0 1 N N N N N N 30.058 21.442 -28.734 -2.951 -0.662 2.709 H1 GM0 47 A1JBS H11 H11 H 0 1 N N N N N N 30.205 23.705 -27.673 -5.205 -1.736 2.685 H2 GM0 48 A1JBS H22 H22 H 0 1 N N N N N N 31.816 22.719 -29.046 -4.842 0.195 4.046 HO2 GM0 49 A1JBS H16 H16 H 0 1 N N N N N N 28.369 24.903 -28.763 -5.752 -1.350 0.314 H3 GM0 50 A1JBS H23 H23 H 0 1 N N N N N N 30.339 26.075 -28.260 -7.573 -1.482 1.857 HO3 GM0 51 A1JBS H17 H17 H 0 1 N N N N N N 29.996 24.490 -31.295 -5.950 1.590 1.121 H4 GM0 52 A1JBS H18 H18 H 0 1 N N N N N N 27.346 23.291 -30.439 -3.956 0.147 -0.686 H5 GM0 53 A1JBS H19 H19 H 0 1 N N N N N N 27.381 23.704 -32.864 -4.445 2.417 -1.464 H6 GM0 54 A1JBS H24 H24 H 0 1 N N N N N N 29.709 23.588 -33.110 -3.915 3.246 1.268 HO6 GM0 55 A1JBS H20 H20 H 0 1 N N N N N N 27.027 21.299 -33.523 -1.884 2.408 0.194 H71 GM0 56 A1JBS H21 H21 H 0 1 N N N N N N 27.779 20.792 -31.973 -2.061 1.626 -1.395 H72 GM0 57 A1JBS H25 H25 H 0 1 N N N N N N 25.468 20.851 -31.873 -1.213 3.851 -1.587 HO7 GM0 58 A1JBS H26 H26 H 0 1 N N N N N N 27.826 27.725 -33.635 -9.226 1.079 0.018 H13 GM0 59 A1JBS H27 H27 H 0 1 N N N N N N 30.625 27.743 -31.356 -8.832 2.739 -2.638 H14 GM0 60 A1JBS H1 H1 H 0 1 N N N N N N 25.475 18.727 -29.003 0.172 -0.312 -1.817 H1 GMH 61 A1JBS H2 H2 H 0 1 N N N N N N 27.356 20.195 -29.741 -1.742 0.264 -0.320 H2 GMH 62 A1JBS H3 H3 H 0 1 N N N N N N 28.589 20.306 -27.654 -1.287 -1.367 1.470 H3 GMH 63 A1JBS H4 H4 H 0 1 N N N N N N 26.205 21.897 -26.635 -2.111 -3.457 -0.599 H4 GMH 64 A1JBS H5 H5 H 0 1 N N N N N N 27.217 19.161 -25.763 0.594 -2.894 0.702 H5 GMH 65 A1JBS H12 H12 H 0 1 N N N N N N 26.191 20.600 -23.991 0.238 -5.281 0.287 H6 GMH 66 A1JBS H7 H7 H 0 1 N N N N N N 24.793 18.148 -25.074 1.862 -4.054 -1.986 H71 GMH 67 A1JBS H8 H8 H 0 1 N N N N N N 25.990 18.282 -23.741 2.445 -4.242 -0.315 H72 GMH 68 A1JBS H13 H13 H 0 1 N N N N N N 26.044 22.128 -29.484 -2.182 -0.612 -2.500 HO2 GMH 69 A1JBS H14 H14 H 0 1 N N N N N N 27.400 21.780 -24.650 -1.521 -4.903 1.209 HO4 GMH 70 A1JBS H6 H6 H 0 1 N N N N N N 23.919 21.027 -24.196 -0.507 -4.491 -2.406 HO6 GMH 71 A1JBS H15 H15 H 0 1 N N N N N N 23.824 17.952 -22.974 3.059 -6.099 -1.686 HO7 GMH 72 A1JBS H28 H28 H 0 1 N N N N N N 29.836 18.383 -21.893 8.901 -0.250 -0.475 H1 A1JAY 73 A1JBS H29 H29 H 0 1 N N N N N N 28.211 16.816 -22.837 6.620 2.427 -0.343 H2 A1JAY 74 A1JBS H30 H30 H 0 1 N N N N N N 27.281 15.783 -24.865 4.223 2.230 0.181 H3 A1JAY 75 A1JBS H31 H31 H 0 1 N N N N N N 27.756 15.053 -27.224 2.757 -0.662 1.901 H4 A1JAY 76 A1JBS H32 H32 H 0 1 N N N N N N 28.889 16.026 -28.222 2.517 1.036 1.424 H5 A1JAY 77 A1JBS H33 H33 H 0 1 N N N N N N 26.094 16.787 -27.307 2.280 0.338 -0.943 H6 A1JAY 78 A1JBS H34 H34 H 0 1 N N N N N N 26.650 16.442 -28.979 2.519 -1.360 -0.467 H7 A1JAY 79 A1JBS H35 H35 H 0 1 N N N N N N 30.220 17.735 -27.246 4.797 -1.839 1.322 H9 A1JAY 80 A1JBS H9 H9 H 0 1 N N N N N N 31.154 18.793 -25.237 7.194 -1.655 0.795 H10 A1JAY 81 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JBS O11 P DOUB N N 1 A1JBS O61 C61 SING N N 2 A1JBS O22 P SING N N 3 A1JBS C71 C61 SING N N 4 A1JBS C71 O71 SING N N 5 A1JBS C61 C51 SING N N 6 A1JBS P O41 SING N N 7 A1JBS P O42 SING N N 8 A1JBS O41 C41 SING N N 9 A1JBS C51 C41 SING N N 10 A1JBS C51 O51 SING N N 11 A1JBS C41 C31 SING N N 12 A1JBS O51 C11 SING N N 13 A1JBS O21 C21 SING N N 14 A1JBS C31 O31 SING N N 15 A1JBS C31 C21 SING N N 16 A1JBS O2 C2 SING N N 17 A1JBS C11 C21 SING N N 18 A1JBS C11 O3 SING N N 19 A1JBS C2 C1 SING N N 20 A1JBS C2 C3 SING N N 21 A1JBS C1 O1 SING N N 22 A1JBS C1 O5 SING N N 23 A1JBS O3 C3 SING N N 24 A1JBS O1 C72 SING N N 25 A1JBS C72 C62 SING N N 26 A1JBS C3 C4 SING N N 27 A1JBS C62 C52 SING N N 28 A1JBS O5 C5 SING N N 29 A1JBS C4 C5 SING N N 30 A1JBS C4 O4 SING N N 31 A1JBS C8 C52 DOUB Y N 32 A1JBS C8 C9 SING Y N 33 A1JBS C52 C42 SING Y N 34 A1JBS C5 C6 SING N N 35 A1JBS C9 C22 DOUB Y N 36 A1JBS O6 C6 SING N N 37 A1JBS C42 C32 DOUB Y N 38 A1JBS C6 C7 SING N N 39 A1JBS C7 O7 SING N N 40 A1JBS C22 C32 SING Y N 41 A1JBS C22 N1 SING N N 42 A1JBS F1 C10 SING N N 43 A1JBS O12 C12 DOUB N N 44 A1JBS N1 C12 SING N N 45 A1JBS C12 C10 SING N N 46 A1JBS C10 F2 SING N N 47 A1JBS C10 F3 SING N N 48 A1JBS C1 H1 SING N N 49 A1JBS C2 H2 SING N N 50 A1JBS C3 H3 SING N N 51 A1JBS C4 H4 SING N N 52 A1JBS C5 H5 SING N N 53 A1JBS O6 H6 SING N N 54 A1JBS C7 H7 SING N N 55 A1JBS C7 H8 SING N N 56 A1JBS C9 H9 SING N N 57 A1JBS C11 H10 SING N N 58 A1JBS C21 H11 SING N N 59 A1JBS C6 H12 SING N N 60 A1JBS O2 H13 SING N N 61 A1JBS O4 H14 SING N N 62 A1JBS O7 H15 SING N N 63 A1JBS C31 H16 SING N N 64 A1JBS C41 H17 SING N N 65 A1JBS C51 H18 SING N N 66 A1JBS C61 H19 SING N N 67 A1JBS C71 H20 SING N N 68 A1JBS C71 H21 SING N N 69 A1JBS O21 H22 SING N N 70 A1JBS O31 H23 SING N N 71 A1JBS O61 H24 SING N N 72 A1JBS O71 H25 SING N N 73 A1JBS O22 H26 SING N N 74 A1JBS O42 H27 SING N N 75 A1JBS N1 H28 SING N N 76 A1JBS C32 H29 SING N N 77 A1JBS C42 H30 SING N N 78 A1JBS C62 H31 SING N N 79 A1JBS C62 H32 SING N N 80 A1JBS C72 H33 SING N N 81 A1JBS C72 H34 SING N N 82 A1JBS C8 H35 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JBS InChI InChI 1.06 "InChI=1S/C24H35F3NO17P/c25-24(26,27)23(37)28-10-3-1-9(2-4-10)5-6-41-21-16(36)19(15(35)17(42-21)11(31)7-29)44-22-14(34)13(33)20(45-46(38,39)40)18(43-22)12(32)8-30/h1-4,11-22,29-36H,5-8H2,(H,28,37)(H2,38,39,40)/t11-,12-,13+,14-,15+,16-,17+,18+,19-,20-,21-,22+/m0/s1" A1JBS InChIKey InChI 1.06 TWBTYLITQJEZMJ-CYMRCLIHSA-N A1JBS SMILES_CANONICAL CACTVS 3.385 "OC[C@H](O)[C@H]1O[C@H](OCCc2ccc(NC(=O)C(F)(F)F)cc2)[C@@H](O)[C@@H](O[C@H]3O[C@H]([C@@H](O)CO)[C@@H](O[P](O)(O)=O)[C@H](O)[C@@H]3O)[C@@H]1O" A1JBS SMILES CACTVS 3.385 "OC[CH](O)[CH]1O[CH](OCCc2ccc(NC(=O)C(F)(F)F)cc2)[CH](O)[CH](O[CH]3O[CH]([CH](O)CO)[CH](O[P](O)(O)=O)[CH](O)[CH]3O)[CH]1O" A1JBS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CCO[C@@H]2[C@H]([C@H]([C@@H]([C@H](O2)[C@H](CO)O)O)O[C@@H]3[C@H]([C@H]([C@@H]([C@H](O3)[C@H](CO)O)OP(=O)(O)O)O)O)O)NC(=O)C(F)(F)F" A1JBS SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1CCOC2C(C(C(C(O2)C(CO)O)O)OC3C(C(C(C(O3)C(CO)O)OP(=O)(O)O)O)O)O)NC(=O)C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id A1JBS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S},4~{R},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-6-[(2~{R},3~{R},4~{S},5~{S},6~{S})-2-[(1~{S})-1,2-bis(oxidanyl)ethyl]-3,5-bis(oxidanyl)-6-[2-[4-[2,2,2-tris(fluoranyl)ethanoylamino]phenyl]ethoxy]oxan-4-yl]oxy-4,5-bis(oxidanyl)oxan-3-yl] dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JBS "Create component" 2025-05-02 PDBE A1JBS "Initial release" 2026-03-04 RCSB #