data_A1JD7 # _chem_comp.id A1JD7 _chem_comp.name "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(~{E},2~{R})-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pent-4-en-2-yl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H47 B O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-05-30 _chem_comp.pdbx_modified_date 2026-06-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 482.503 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JD7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RC9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JD7 C7 C1 C 0 1 N N N N N N -30.495 18.567 -3.707 1.418 1.649 1.910 C7 A1JD7 1 A1JD7 C8 C2 C 0 1 N N N N N N -28.989 18.277 -3.938 -0.051 2.139 2.045 C8 A1JD7 2 A1JD7 C9 C3 C 0 1 N N R N N N -28.932 16.970 -4.743 -0.412 2.812 0.694 C9 A1JD7 3 A1JD7 C1 C4 C 0 1 N N N N N N -32.219 15.576 -6.424 2.326 3.133 -2.049 C1 A1JD7 4 A1JD7 C5 C5 C 0 1 N N R N N N -30.258 16.963 -5.524 0.806 2.598 -0.191 C5 A1JD7 5 A1JD7 C6 C6 C 0 1 N N N N N N -30.736 15.601 -6.037 1.128 3.645 -1.232 C6 A1JD7 6 A1JD7 C4 C7 C 0 1 N N S N N N -31.212 17.365 -4.369 1.983 2.569 0.826 C4 A1JD7 7 A1JD7 C3 C8 C 0 1 N N N N N N -32.611 17.493 -4.813 3.165 2.058 0.057 C3 A1JD7 8 A1JD7 C2 C9 C 0 1 N N N N N N -33.158 16.179 -5.338 3.547 2.878 -1.167 C2 A1JD7 9 A1JD7 B27 B1 B 0 1 N N N N N N -25.477 17.969 -9.214 -5.852 -0.165 0.653 B27 A1JD7 10 A1JD7 C10 C10 C 0 1 N N N N N N -33.335 18.637 -4.786 3.833 0.963 0.419 C10 A1JD7 11 A1JD7 C11 C11 C 0 1 N N N N N N -34.705 18.817 -5.129 4.981 0.510 -0.370 C11 A1JD7 12 A1JD7 C12 C12 C 0 1 N N N N N N -35.313 19.939 -5.514 5.657 -0.598 -0.003 C12 A1JD7 13 A1JD7 C13 C13 C 0 1 N N N N N N -36.803 19.947 -5.769 6.850 -1.099 -0.793 C13 A1JD7 14 A1JD7 C14 C14 C 0 1 N N R N N N -37.467 21.195 -5.224 6.691 -2.608 -1.001 C14 A1JD7 15 A1JD7 C15 C15 C 0 1 N N N N N N -36.744 22.409 -5.760 6.574 -3.309 0.353 C15 A1JD7 16 A1JD7 C16 C16 C 0 1 N N S N N N -35.296 22.386 -5.320 5.271 -2.890 1.043 C16 A1JD7 17 A1JD7 C17 C17 C 0 1 N N N N N N -34.608 21.155 -5.837 5.275 -1.378 1.192 C17 A1JD7 18 A1JD7 C18 C18 C 0 1 N N N N N N -33.530 21.284 -6.578 4.948 -0.784 2.340 C18 A1JD7 19 A1JD7 C21 C19 C 0 1 N N N N N N -30.322 18.013 -6.649 0.708 1.228 -0.864 C21 A1JD7 20 A1JD7 C22 C20 C 0 1 N N R N N N -27.597 16.809 -5.490 -1.641 2.140 0.078 C22 A1JD7 21 A1JD7 C23 C21 C 0 1 N N N N N N -26.577 15.964 -4.734 -1.957 2.794 -1.269 C23 A1JD7 22 A1JD7 C24 C22 C 0 1 N N N N N N -27.004 18.194 -5.764 -2.837 2.304 1.017 C24 A1JD7 23 A1JD7 C25 C23 C 0 1 N N N N N N -26.033 17.913 -6.835 -4.014 1.539 0.470 C25 A1JD7 24 A1JD7 C26 C24 C 0 1 N N N N N N -26.426 18.271 -8.046 -4.625 0.632 1.223 C26 A1JD7 25 A1JD7 C29 C25 C 0 1 N N N N N N -23.687 17.194 -10.376 -6.892 -2.161 0.301 C29 A1JD7 26 A1JD7 C30 C26 C 0 1 N N N N N N -24.379 18.354 -11.137 -6.771 -1.393 -1.031 C30 A1JD7 27 A1JD7 C32 C27 C 0 1 N N N N N N -24.620 18.119 -12.608 -8.099 -1.429 -1.789 C32 A1JD7 28 A1JD7 C33 C28 C 0 1 N N N N N N -23.719 19.708 -10.899 -5.651 -1.986 -1.888 C33 A1JD7 29 A1JD7 C34 C29 C 0 1 N N N N N N -22.183 17.320 -10.148 -5.855 -3.284 0.365 C34 A1JD7 30 A1JD7 C35 C30 C 0 1 N N N N N N -24.049 15.818 -10.931 -8.303 -2.729 0.462 C35 A1JD7 31 A1JD7 O19 O1 O 0 1 N N N N N N -34.658 23.569 -5.687 4.154 -3.297 0.250 O19 A1JD7 32 A1JD7 O20 O2 O 0 1 N N N N N N -37.417 21.175 -3.783 7.830 -3.114 -1.700 O20 A1JD7 33 A1JD7 O28 O3 O 0 1 N N N N N N -24.293 17.317 -9.050 -6.626 -1.172 1.319 O28 A1JD7 34 A1JD7 O31 O4 O 0 1 N N N N N N -25.684 18.368 -10.496 -6.448 -0.040 -0.646 O31 A1JD7 35 A1JD7 HC7A H1 H 0 0 N N N N N N -30.790 19.512 -4.188 1.957 1.782 2.848 HC7A A1JD7 36 A1JD7 HC7B H2 H 0 0 N N N N N N -30.724 18.615 -2.632 1.450 0.607 1.592 HC7B A1JD7 37 A1JD7 HC8A H3 H 0 0 N N N N N N -28.524 19.097 -4.505 -0.713 1.293 2.230 HC8A A1JD7 38 A1JD7 HC8B H4 H 0 0 N N N N N N -28.470 18.157 -2.975 -0.132 2.862 2.856 HC8B A1JD7 39 A1JD7 HC9 H5 H 0 1 N N N N N N -28.989 16.147 -4.016 -0.595 3.876 0.838 HC9 A1JD7 40 A1JD7 HC1A H6 H 0 0 N N N N N N -32.515 14.531 -6.598 2.047 2.203 -2.546 HC1A A1JD7 41 A1JD7 HC1B H7 H 0 0 N N N N N N -32.346 16.153 -7.352 2.583 3.874 -2.806 HC1B A1JD7 42 A1JD7 HC6A H8 H 0 0 N N N N N N -30.570 14.854 -5.247 1.387 4.584 -0.745 HC6A A1JD7 43 A1JD7 HC6B H9 H 0 0 N N N N N N -30.141 15.335 -6.923 0.269 3.791 -1.887 HC6B A1JD7 44 A1JD7 HC4 H10 H 0 1 N N N N N N -31.176 16.543 -3.639 2.176 3.565 1.226 HC4 A1JD7 45 A1JD7 HC2B H11 H 0 0 N N N N N N -34.151 16.353 -5.778 4.299 2.337 -1.742 HC2B A1JD7 46 A1JD7 HC2A H12 H 0 0 N N N N N N -33.246 15.467 -4.504 3.962 3.833 -0.844 HC2A A1JD7 47 A1JD7 HC10 H13 H 0 0 N N N N N N -32.808 19.523 -4.464 3.528 0.410 1.295 HC10 A1JD7 48 A1JD7 HC11 H14 H 0 0 N N N N N N -35.328 17.937 -5.070 5.286 1.064 -1.246 HC11 A1JD7 49 A1JD7 H13B H15 H 0 0 N N N N N N -36.978 19.897 -6.854 6.887 -0.597 -1.760 H13B A1JD7 50 A1JD7 H13A H16 H 0 0 N N N N N N -37.251 19.067 -5.285 7.767 -0.899 -0.240 H13A A1JD7 51 A1JD7 HC14 H17 H 0 0 N N N N N N -38.513 21.221 -5.564 5.793 -2.801 -1.587 HC14 A1JD7 52 A1JD7 H15A H18 H 0 0 N N N N N N -36.791 22.405 -6.859 6.574 -4.388 0.204 H15A A1JD7 53 A1JD7 H15B H19 H 0 0 N N N N N N -37.227 23.320 -5.376 7.421 -3.030 0.980 H15B A1JD7 54 A1JD7 HC16 H20 H 0 0 N N N N N N -35.296 22.318 -4.222 5.211 -3.354 2.027 HC16 A1JD7 55 A1JD7 H18B H21 H 0 0 N N N N N N -33.148 22.267 -6.809 4.959 0.294 2.412 H18B A1JD7 56 A1JD7 H18A H22 H 0 0 N N N N N N -33.026 20.407 -6.956 4.673 -1.380 3.197 H18A A1JD7 57 A1JD7 H21B H23 H 0 0 N N N N N N -29.643 17.720 -7.463 1.655 0.994 -1.351 H21B A1JD7 58 A1JD7 H21A H24 H 0 0 N N N N N N -31.351 18.076 -7.034 0.488 0.469 -0.114 H21A A1JD7 59 A1JD7 H21C H25 H 0 0 N N N N N N -30.018 18.993 -6.253 -0.089 1.245 -1.608 H21C A1JD7 60 A1JD7 HC22 H26 H 0 0 N N N N N N -27.801 16.324 -6.456 -1.439 1.079 -0.072 HC22 A1JD7 61 A1JD7 H23C H27 H 0 0 N N N N N N -25.651 15.891 -5.324 -1.105 2.677 -1.939 H23C A1JD7 62 A1JD7 H23B H28 H 0 0 N N N N N N -26.358 16.435 -3.764 -2.832 2.315 -1.709 H23B A1JD7 63 A1JD7 H23A H29 H 0 0 N N N N N N -26.986 14.956 -4.569 -2.159 3.854 -1.120 H23A A1JD7 64 A1JD7 H24B H30 H 0 0 N N N N N N -27.778 18.899 -6.103 -2.580 1.918 2.004 H24B A1JD7 65 A1JD7 H24A H31 H 0 0 N N N N N N -26.506 18.598 -4.870 -3.095 3.360 1.097 H24A A1JD7 66 A1JD7 HC25 H32 H 0 0 N N N N N N -25.075 17.451 -6.646 -4.361 1.729 -0.535 HC25 A1JD7 67 A1JD7 HC26 H33 H 0 0 N N N N N N -27.377 18.757 -8.207 -4.278 0.442 2.228 HC26 A1JD7 68 A1JD7 H32B H34 H 0 0 N N N N N N -25.113 19.000 -13.045 -8.877 -0.966 -1.182 H32B A1JD7 69 A1JD7 H32C H35 H 0 0 N N N N N N -23.658 17.948 -13.114 -7.997 -0.883 -2.727 H32C A1JD7 70 A1JD7 H32A H36 H 0 0 N N N N N N -25.265 17.237 -12.738 -8.370 -2.464 -1.999 H32A A1JD7 71 A1JD7 H33C H37 H 0 0 N N N N N N -24.256 20.483 -11.465 -5.870 -3.032 -2.100 H33C A1JD7 72 A1JD7 H33B H38 H 0 0 N N N N N N -23.752 19.948 -9.826 -5.578 -1.433 -2.825 H33B A1JD7 73 A1JD7 H33A H39 H 0 0 N N N N N N -22.672 19.669 -11.234 -4.705 -1.914 -1.350 H33A A1JD7 74 A1JD7 H34B H40 H 0 0 N N N N N N -21.657 17.236 -11.111 -4.854 -2.859 0.290 H34B A1JD7 75 A1JD7 H34A H41 H 0 0 N N N N N N -21.962 18.297 -9.693 -5.954 -3.816 1.311 H34A A1JD7 76 A1JD7 H34C H42 H 0 0 N N N N N N -21.846 16.518 -9.475 -6.019 -3.977 -0.460 H34C A1JD7 77 A1JD7 H35A H43 H 0 0 N N N N N N -23.606 15.697 -11.930 -8.517 -3.411 -0.361 H35A A1JD7 78 A1JD7 H35C H44 H 0 0 N N N N N N -23.659 15.038 -10.260 -8.372 -3.268 1.408 H35C A1JD7 79 A1JD7 H35B H45 H 0 0 N N N N N N -25.143 15.728 -11.002 -9.027 -1.914 0.456 H35B A1JD7 80 A1JD7 HO19 H46 H 0 0 N N N N N N -33.751 23.541 -5.405 3.296 -3.063 0.629 HO19 A1JD7 81 A1JD7 HO20 H47 H 0 0 N N N N N N -37.833 21.957 -3.440 7.964 -2.718 -2.572 HO20 A1JD7 82 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JD7 C1 C2 SING N N 1 A1JD7 C1 C6 SING N N 2 A1JD7 C2 C3 SING N N 3 A1JD7 C3 C4 SING N N 4 A1JD7 C3 C10 DOUB N E 5 A1JD7 C4 C5 SING N N 6 A1JD7 C4 C7 SING N N 7 A1JD7 C5 C6 SING N N 8 A1JD7 C5 C9 SING N N 9 A1JD7 C5 C21 SING N N 10 A1JD7 C7 C8 SING N N 11 A1JD7 C8 C9 SING N N 12 A1JD7 C9 C22 SING N N 13 A1JD7 C10 C11 SING N N 14 A1JD7 C11 C12 DOUB N Z 15 A1JD7 C12 C13 SING N N 16 A1JD7 C12 C17 SING N N 17 A1JD7 C13 C14 SING N N 18 A1JD7 C14 C15 SING N N 19 A1JD7 C14 O20 SING N N 20 A1JD7 C15 C16 SING N N 21 A1JD7 C16 C17 SING N N 22 A1JD7 C16 O19 SING N N 23 A1JD7 C17 C18 DOUB N N 24 A1JD7 C22 C23 SING N N 25 A1JD7 C22 C24 SING N N 26 A1JD7 C24 C25 SING N N 27 A1JD7 C25 C26 DOUB N E 28 A1JD7 C26 B27 SING N N 29 A1JD7 B27 O28 SING N N 30 A1JD7 B27 O31 SING N N 31 A1JD7 O28 C29 SING N N 32 A1JD7 C29 C30 SING N N 33 A1JD7 C29 C34 SING N N 34 A1JD7 C29 C35 SING N N 35 A1JD7 C30 O31 SING N N 36 A1JD7 C30 C32 SING N N 37 A1JD7 C30 C33 SING N N 38 A1JD7 C7 HC7A SING N N 39 A1JD7 C7 HC7B SING N N 40 A1JD7 C8 HC8A SING N N 41 A1JD7 C8 HC8B SING N N 42 A1JD7 C9 HC9 SING N N 43 A1JD7 C1 HC1A SING N N 44 A1JD7 C1 HC1B SING N N 45 A1JD7 C6 HC6A SING N N 46 A1JD7 C6 HC6B SING N N 47 A1JD7 C4 HC4 SING N N 48 A1JD7 C2 HC2B SING N N 49 A1JD7 C2 HC2A SING N N 50 A1JD7 C10 HC10 SING N N 51 A1JD7 C11 HC11 SING N N 52 A1JD7 C13 H13B SING N N 53 A1JD7 C13 H13A SING N N 54 A1JD7 C14 HC14 SING N N 55 A1JD7 C15 H15A SING N N 56 A1JD7 C15 H15B SING N N 57 A1JD7 C16 HC16 SING N N 58 A1JD7 C18 H18B SING N N 59 A1JD7 C18 H18A SING N N 60 A1JD7 C21 H21B SING N N 61 A1JD7 C21 H21A SING N N 62 A1JD7 C21 H21C SING N N 63 A1JD7 C22 HC22 SING N N 64 A1JD7 C23 H23C SING N N 65 A1JD7 C23 H23B SING N N 66 A1JD7 C23 H23A SING N N 67 A1JD7 C24 H24B SING N N 68 A1JD7 C24 H24A SING N N 69 A1JD7 C25 HC25 SING N N 70 A1JD7 C26 HC26 SING N N 71 A1JD7 C32 H32B SING N N 72 A1JD7 C32 H32C SING N N 73 A1JD7 C32 H32A SING N N 74 A1JD7 C33 H33C SING N N 75 A1JD7 C33 H33B SING N N 76 A1JD7 C33 H33A SING N N 77 A1JD7 C34 H34B SING N N 78 A1JD7 C34 H34A SING N N 79 A1JD7 C34 H34C SING N N 80 A1JD7 C35 H35A SING N N 81 A1JD7 C35 H35C SING N N 82 A1JD7 C35 H35B SING N N 83 A1JD7 O19 HO19 SING N N 84 A1JD7 O20 HO20 SING N N 85 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JD7 InChI InChI 1.06 "InChI=1S/C30H47BO4/c1-20(10-9-17-31-34-28(3,4)29(5,6)35-31)25-14-15-26-22(11-8-16-30(25,26)7)12-13-23-18-24(32)19-27(33)21(23)2/h9,12-13,17,20,24-27,32-33H,2,8,10-11,14-16,18-19H2,1,3-7H3/b17-9+,22-12+,23-13-/t20-,24-,25-,26+,27+,30-/m1/s1" A1JD7 InChIKey InChI 1.06 NTBFEAROXFZLHI-RBCKDSHYSA-N A1JD7 SMILES_CANONICAL CACTVS 3.385 "C[C@H](C\C=C\B1OC(C)(C)C(C)(C)O1)[C@H]2CC[C@H]3\C(CCC[C@]23C)=C\C=C4\C[C@@H](O)C[C@H](O)C4=C" A1JD7 SMILES CACTVS 3.385 "C[CH](CC=CB1OC(C)(C)C(C)(C)O1)[CH]2CC[CH]3C(CCC[C]23C)=CC=C4C[CH](O)C[CH](O)C4=C" A1JD7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(OC(C(O1)(C)C)(C)C)/C=C/C[C@@H](C)[C@H]2CC[C@@H]\3[C@@]2(CCC/C3=C\C=C/4\C[C@H](C[C@@H](C4=C)O)O)C" A1JD7 SMILES "OpenEye OEToolkits" 2.0.7 "B1(OC(C(O1)(C)C)(C)C)C=CCC(C)C2CCC3C2(CCCC3=CC=C4CC(CC(C4=C)O)O)C" # _pdbx_chem_comp_identifier.comp_id A1JD7 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{R},3~{S},5~{Z})-5-[(2~{E})-2-[(1~{R},3~{a}~{S},7~{a}~{R})-7~{a}-methyl-1-[(~{E},2~{R})-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)pent-4-en-2-yl]-2,3,3~{a},5,6,7-hexahydro-1~{H}-inden-4-ylidene]ethylidene]-4-methylidene-cyclohexane-1,3-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JD7 "Create component" 2025-05-30 PDBE A1JD7 "Initial release" 2026-06-24 RCSB #