data_A1JEI # _chem_comp.id A1JEI _chem_comp.name "1-[[(2~{R},3~{S},6~{S})-6-(2-hydroxyethyl)-3-oxidanyl-oxan-2-yl]methyl]-3-phenyl-urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H22 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-03 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 294.346 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JEI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9REQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JEI C10 C1 C 0 1 Y N N N N N -12.111 3.677 -29.638 -3.644 0.009 -0.391 C10 A1JEI 1 A1JEI C11 C2 C 0 1 Y N N N N N -11.438 2.493 -29.365 -3.806 0.084 0.986 C11 A1JEI 2 A1JEI C12 C3 C 0 1 Y N N N N N -10.092 2.501 -28.986 -5.074 0.170 1.528 C12 A1JEI 3 A1JEI C13 C4 C 0 1 Y N N N N N -9.406 3.677 -28.830 -6.181 0.182 0.700 C13 A1JEI 4 A1JEI C14 C5 C 0 1 Y N N N N N -10.058 4.863 -29.105 -6.023 0.107 -0.672 C14 A1JEI 5 A1JEI C15 C6 C 0 1 Y N N N N N -11.388 4.852 -29.487 -4.758 0.021 -1.219 C15 A1JEI 6 A1JEI C01 C7 C 0 1 N N N N N N -18.936 3.842 -33.822 3.914 -0.090 1.276 C01 A1JEI 7 A1JEI C02 C8 C 0 1 N N S N N N -18.123 5.123 -33.886 2.808 0.673 0.542 C02 A1JEI 8 A1JEI C03 C9 C 0 1 N N R N N N -17.815 5.196 -31.406 2.263 -1.246 -0.789 C03 A1JEI 9 A1JEI C04 C10 C 0 1 N N S N N N -18.474 3.810 -31.332 3.347 -2.086 -0.109 C04 A1JEI 10 A1JEI C05 C11 C 0 1 N N N N N N -19.523 3.593 -32.437 3.553 -1.579 1.321 C05 A1JEI 11 A1JEI C06 C12 C 0 1 N N N N N N -18.825 6.813 -35.596 2.031 2.934 -0.181 C06 A1JEI 12 A1JEI C07 C13 C 0 1 N N N N N N -18.993 6.360 -34.155 3.190 2.151 0.440 C07 A1JEI 13 A1JEI C08 C14 C 0 1 N N N N N N -16.673 5.460 -30.401 0.940 -1.418 -0.041 C08 A1JEI 14 A1JEI C09 C15 C 0 1 N N N N N N -14.385 4.707 -30.056 -1.383 -0.723 -0.282 C09 A1JEI 15 A1JEI N01 N1 N 0 1 N N N N N N -15.719 4.346 -30.193 -0.123 -0.710 -0.759 N01 A1JEI 16 A1JEI N02 N2 N 0 1 N N N N N N -13.497 3.652 -29.909 -2.361 -0.072 -0.943 N02 A1JEI 17 A1JEI O01 O1 O 0 1 N N N N N N -17.294 5.410 -32.737 2.647 0.130 -0.770 O01 A1JEI 18 A1JEI O02 O2 O 0 1 N N N N N N -19.541 8.015 -35.816 2.388 4.315 -0.276 O02 A1JEI 19 A1JEI O03 O3 O 0 1 N N N N N N -19.071 3.568 -30.050 4.571 -1.969 -0.838 O03 A1JEI 20 A1JEI O04 O4 O 0 1 N N N N N N -14.054 5.868 -30.127 -1.638 -1.321 0.746 O04 A1JEI 21 A1JEI H18 H1 H 0 1 N N N N N N -11.962 1.552 -29.447 -2.941 0.075 1.634 H18 A1JEI 22 A1JEI H19 H2 H 0 1 N N N N N N -9.584 1.564 -28.813 -5.200 0.228 2.599 H19 A1JEI 23 A1JEI H20 H3 H 0 1 N N N N N N -8.378 3.676 -28.499 -7.172 0.248 1.125 H20 A1JEI 24 A1JEI H21 H4 H 0 1 N N N N N N -9.529 5.801 -29.022 -6.890 0.116 -1.316 H21 A1JEI 25 A1JEI H22 H5 H 0 1 N N N N N N -11.882 5.794 -29.675 -4.636 -0.037 -2.291 H22 A1JEI 26 A1JEI H02 H6 H 0 1 N N N N N N -18.284 2.996 -34.086 4.859 0.040 0.748 H02 A1JEI 27 A1JEI H01 H7 H 0 1 N N N N N N -19.760 3.910 -34.548 4.008 0.292 2.292 H01 A1JEI 28 A1JEI H03 H8 H 0 1 N N N N N N -17.454 5.023 -34.754 1.872 0.576 1.093 H03 A1JEI 29 A1JEI H04 H9 H 0 1 N N N N N N -18.599 5.943 -31.214 2.142 -1.575 -1.821 H04 A1JEI 30 A1JEI H05 H10 H 0 1 N N N N N N -17.680 3.066 -31.490 3.036 -3.131 -0.084 H05 A1JEI 31 A1JEI H06 H11 H 0 1 N N N N N N -20.362 4.286 -32.275 4.363 -2.136 1.793 H06 A1JEI 32 A1JEI H07 H12 H 0 1 N N N N N N -19.888 2.557 -32.385 2.635 -1.714 1.892 H07 A1JEI 33 A1JEI H09 H13 H 0 1 N N N N N N -19.209 6.033 -36.270 1.821 2.544 -1.176 H09 A1JEI 34 A1JEI H10 H14 H 0 1 N N N N N N -17.758 6.983 -35.802 1.145 2.830 0.445 H10 A1JEI 35 A1JEI H11 H15 H 0 1 N N N N N N -20.048 6.109 -33.973 3.400 2.541 1.436 H11 A1JEI 36 A1JEI H12 H16 H 0 1 N N N N N N -18.688 7.173 -33.480 4.076 2.255 -0.185 H12 A1JEI 37 A1JEI H13 H17 H 0 1 N N N N N N -16.102 6.329 -30.761 0.693 -2.477 0.022 H13 A1JEI 38 A1JEI H14 H18 H 0 1 N N N N N N -17.129 5.698 -29.429 1.035 -1.006 0.964 H14 A1JEI 39 A1JEI H16 H19 H 0 1 N N N N N N -16.017 3.392 -30.154 0.081 -0.233 -1.579 H16 A1JEI 40 A1JEI H17 H20 H 0 1 N N N N N N -13.896 2.741 -30.010 -2.175 0.340 -1.801 H17 A1JEI 41 A1JEI H08 H21 H 0 1 N N N N N N -19.430 8.290 -36.719 1.699 4.873 -0.662 H08 A1JEI 42 A1JEI H15 H22 H 0 1 N N N N N N -19.467 2.704 -30.042 5.303 -2.476 -0.463 H15 A1JEI 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JEI C01 C05 SING N N 1 A1JEI C01 C02 SING N N 2 A1JEI C02 O01 SING N N 3 A1JEI C02 C07 SING N N 4 A1JEI O01 C03 SING N N 5 A1JEI C03 C04 SING N N 6 A1JEI C03 C08 SING N N 7 A1JEI C04 C05 SING N N 8 A1JEI C04 O03 SING N N 9 A1JEI O02 C06 SING N N 10 A1JEI C06 C07 SING N N 11 A1JEI C08 N01 SING N N 12 A1JEI N01 C09 SING N N 13 A1JEI C09 N02 SING N N 14 A1JEI C09 O04 DOUB N N 15 A1JEI N02 C10 SING N N 16 A1JEI C10 C11 DOUB Y N 17 A1JEI C10 C15 SING Y N 18 A1JEI C11 C12 SING Y N 19 A1JEI C12 C13 DOUB Y N 20 A1JEI C13 C14 SING Y N 21 A1JEI C14 C15 DOUB Y N 22 A1JEI C11 H18 SING N N 23 A1JEI C12 H19 SING N N 24 A1JEI C13 H20 SING N N 25 A1JEI C14 H21 SING N N 26 A1JEI C15 H22 SING N N 27 A1JEI C01 H02 SING N N 28 A1JEI C01 H01 SING N N 29 A1JEI C02 H03 SING N N 30 A1JEI C03 H04 SING N N 31 A1JEI C04 H05 SING N N 32 A1JEI C05 H06 SING N N 33 A1JEI C05 H07 SING N N 34 A1JEI C06 H09 SING N N 35 A1JEI C06 H10 SING N N 36 A1JEI C07 H11 SING N N 37 A1JEI C07 H12 SING N N 38 A1JEI C08 H13 SING N N 39 A1JEI C08 H14 SING N N 40 A1JEI N01 H16 SING N N 41 A1JEI N02 H17 SING N N 42 A1JEI O02 H08 SING N N 43 A1JEI O03 H15 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JEI InChI InChI 1.06 "InChI=1S/C15H22N2O4/c18-9-8-12-6-7-13(19)14(21-12)10-16-15(20)17-11-4-2-1-3-5-11/h1-5,12-14,18-19H,6-10H2,(H2,16,17,20)/t12-,13+,14?/m1/s1" A1JEI InChIKey InChI 1.06 POOIMVMZLXGVND-AMIUJLCOSA-N A1JEI SMILES_CANONICAL CACTVS 3.385 "OCC[C@@H]1CC[C@H](O)[C@@H](CNC(=O)Nc2ccccc2)O1" A1JEI SMILES CACTVS 3.385 "OCC[CH]1CC[CH](O)[CH](CNC(=O)Nc2ccccc2)O1" A1JEI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)NC(=O)NC[C@@H]2[C@H](CC[C@H](O2)CCO)O" A1JEI SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)NC(=O)NCC2C(CCC(O2)CCO)O" # _pdbx_chem_comp_identifier.comp_id A1JEI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[[(2~{R},3~{S},6~{S})-6-(2-hydroxyethyl)-3-oxidanyl-oxan-2-yl]methyl]-3-phenyl-urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JEI "Create component" 2025-06-03 PDBE A1JEI "Initial release" 2025-12-31 RCSB #