data_A1JER # _chem_comp.id A1JER _chem_comp.name "(3~{R})-3-[4-(5-chloranylthiophen-2-yl)-1~{H}-imidazol-2-yl]morpholine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 Cl N3 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-03 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 269.750 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JER _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RE9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JER C01 C1 C 0 1 Y N N N N N -10.833 3.630 -28.942 -4.178 -0.380 -0.007 C01 A1JER 1 A1JER C02 C2 C 0 1 Y N N N N N -10.390 4.916 -28.987 -3.473 -1.470 -0.323 C02 A1JER 2 A1JER C03 C3 C 0 1 Y N N N N N -11.384 5.798 -29.325 -2.105 -1.285 -0.379 C03 A1JER 3 A1JER C04 C4 C 0 1 Y N N N N N -12.638 5.289 -29.540 -1.695 -0.031 -0.106 C04 A1JER 4 A1JER C05 C5 C 0 1 Y N N N N N -13.951 5.904 -29.887 -0.288 0.425 -0.100 C05 A1JER 5 A1JER C06 C6 C 0 1 Y N N N N N -14.226 7.206 -30.214 0.147 1.685 0.173 C06 A1JER 6 A1JER C07 C7 C 0 1 Y N N N N N -16.194 6.078 -30.253 1.869 0.400 -0.265 C07 A1JER 7 A1JER C08 C8 C 0 1 N N R N N N -17.691 5.935 -30.412 3.281 -0.079 -0.483 C08 A1JER 8 A1JER C09 C9 C 0 1 N N N N N N -18.360 5.259 -29.191 3.562 -1.273 0.433 C09 A1JER 9 A1JER C10 C10 C 0 1 N N N N N N -20.464 5.571 -30.448 5.869 -0.645 0.577 C10 A1JER 10 A1JER C11 C11 C 0 1 N N N N N N -19.665 5.707 -31.777 5.611 0.556 -0.338 C11 A1JER 11 A1JER N01 N1 N 0 1 Y N N N N N -15.617 7.356 -30.462 1.511 1.660 0.066 N01 A1JER 12 A1JER N02 N2 N 0 1 Y N N N N N -15.168 5.185 -29.887 0.797 -0.335 -0.359 N02 A1JER 13 A1JER N03 N3 N 0 1 N N N N N N -18.213 5.457 -31.721 4.222 1.005 -0.168 N03 A1JER 14 A1JER O01 O1 O 0 1 N N N N N N -19.775 5.476 -29.163 4.925 -1.677 0.278 O01 A1JER 15 A1JER S01 S1 S 0 1 Y N N N N N -12.506 3.571 -29.288 -3.091 0.980 0.242 S01 A1JER 16 A1JER CL01 CL1 CL 0 0 N N N N N N -10.032 2.137 -28.599 -5.908 -0.314 0.130 CL01 A1JER 17 A1JER H01 H1 H 0 1 N N N N N N -9.371 5.209 -28.780 -3.938 -2.424 -0.520 H01 A1JER 18 A1JER H02 H2 H 0 1 N N N N N N -11.186 6.856 -29.418 -1.419 -2.082 -0.623 H02 A1JER 19 A1JER H03 H3 H 0 1 N N N N N N -13.495 7.999 -30.274 -0.465 2.538 0.424 H03 A1JER 20 A1JER H05 H4 H 0 1 N N N N N N -18.054 6.972 -30.352 3.407 -0.381 -1.523 H05 A1JER 21 A1JER H06 H5 H 0 1 N N N N N N -18.168 4.177 -29.235 3.383 -0.987 1.470 H06 A1JER 22 A1JER H07 H6 H 0 1 N N N N N N -17.920 5.672 -28.272 2.904 -2.100 0.165 H07 A1JER 23 A1JER H09 H7 H 0 1 N N N N N N -21.076 4.662 -30.543 6.880 -1.017 0.412 H09 A1JER 24 A1JER H08 H8 H 0 1 N N N N N N -21.121 6.451 -30.386 5.758 -0.340 1.617 H08 A1JER 25 A1JER H10 H9 H 0 1 N N N N N N -20.096 4.994 -32.496 6.291 1.366 -0.075 H10 A1JER 26 A1JER H11 H10 H 0 1 N N N N N N -19.810 6.733 -32.146 5.775 0.265 -1.375 H11 A1JER 27 A1JER H04 H11 H 0 1 N N N N N N -16.093 8.194 -30.730 2.111 2.410 0.204 H04 A1JER 28 A1JER H12 H13 H 0 1 N N N N N N -17.759 5.949 -32.463 4.034 1.822 -0.731 H12 A1JER 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JER CL01 C01 SING N N 1 A1JER C01 C02 DOUB Y N 2 A1JER C01 S01 SING Y N 3 A1JER C02 C03 SING Y N 4 A1JER C03 C04 DOUB Y N 5 A1JER C04 S01 SING Y N 6 A1JER C04 C05 SING N N 7 A1JER C05 C06 DOUB Y N 8 A1JER C05 N02 SING Y N 9 A1JER C06 N01 SING Y N 10 A1JER N01 C07 SING Y N 11 A1JER C07 N02 DOUB Y N 12 A1JER C07 C08 SING N N 13 A1JER C08 C09 SING N N 14 A1JER C08 N03 SING N N 15 A1JER C09 O01 SING N N 16 A1JER O01 C10 SING N N 17 A1JER C10 C11 SING N N 18 A1JER C11 N03 SING N N 19 A1JER C02 H01 SING N N 20 A1JER C03 H02 SING N N 21 A1JER C06 H03 SING N N 22 A1JER C08 H05 SING N N 23 A1JER C09 H06 SING N N 24 A1JER C09 H07 SING N N 25 A1JER C10 H09 SING N N 26 A1JER C10 H08 SING N N 27 A1JER C11 H10 SING N N 28 A1JER C11 H11 SING N N 29 A1JER N01 H04 SING N N 30 A1JER N03 H12 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JER InChI InChI 1.06 "InChI=1S/C11H12ClN3OS/c12-10-2-1-9(17-10)7-5-14-11(15-7)8-6-16-4-3-13-8/h1-2,5,8,13H,3-4,6H2,(H,14,15)" A1JER InChIKey InChI 1.06 BPWAXWDRVQSCAM-UHFFFAOYSA-N A1JER SMILES_CANONICAL CACTVS 3.385 "Clc1sc(cc1)c2c[nH]c(n2)[C@@H]3COCCN3" A1JER SMILES CACTVS 3.385 "Clc1sc(cc1)c2c[nH]c(n2)[CH]3COCCN3" A1JER SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1c2c[nH]c(n2)[C@@H]3COCCN3)Cl" A1JER SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(sc1c2c[nH]c(n2)C3COCCN3)Cl" # _pdbx_chem_comp_identifier.comp_id A1JER _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{R})-3-[4-(5-chloranylthiophen-2-yl)-1~{H}-imidazol-2-yl]morpholine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JER "Create component" 2025-06-03 PDBE A1JER "Initial release" 2025-12-31 RCSB #