data_A1JEX # _chem_comp.id A1JEX _chem_comp.name "[(3~{S})-3-(1,3-benzoxazol-2-yl)pyrrolidin-1-yl]-pyrimidin-5-yl-methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-03 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 294.308 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JEX _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RE6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JEX C01 C1 C 0 1 N N N N N N -13.630 1.784 -19.125 2.520 -0.744 -0.707 C01 A1JEX 1 A1JEX C02 C2 C 0 1 N N N N N N -11.486 0.916 -18.537 1.481 1.306 0.305 C02 A1JEX 2 A1JEX C03 C3 C 0 1 N N N N N N -10.156 0.939 -19.203 -0.004 1.534 0.684 C03 A1JEX 3 A1JEX C04 C4 C 0 1 N N S N N N -10.035 2.423 -19.535 -0.727 1.103 -0.620 C04 A1JEX 4 A1JEX C05 C5 C 0 1 N N N N N N -11.465 2.904 -19.981 0.143 -0.066 -1.128 C05 A1JEX 5 A1JEX C06 C6 C 0 1 Y N N N N N -9.371 3.152 -18.413 -2.128 0.634 -0.322 C06 A1JEX 6 A1JEX C07 C7 C 0 1 Y N N N N N -8.456 4.826 -17.266 -4.286 0.492 -0.326 C07 A1JEX 7 A1JEX C08 C8 C 0 1 Y N N N N N -8.373 3.750 -16.463 -3.783 -0.522 0.503 C08 A1JEX 8 A1JEX C09 C9 C 0 1 Y N N N N N -7.815 3.848 -15.235 -4.658 -1.387 1.143 C09 A1JEX 9 A1JEX C10 C10 C 0 1 Y N N N N N -7.345 5.052 -14.825 -6.018 -1.248 0.961 C10 A1JEX 10 A1JEX C11 C11 C 0 1 Y N N N N N -7.415 6.135 -15.649 -6.519 -0.246 0.142 C11 A1JEX 11 A1JEX C12 C12 C 0 1 Y N N N N N -7.968 6.023 -16.891 -5.665 0.622 -0.500 C12 A1JEX 12 A1JEX C13 C13 C 0 1 Y N N N N N -14.633 2.700 -19.712 3.846 -0.397 -0.153 C13 A1JEX 13 A1JEX C14 C14 C 0 1 Y N N N N N -15.807 2.208 -20.179 4.135 0.910 0.256 C14 A1JEX 14 A1JEX C15 C15 C 0 1 Y N N N N N -16.579 4.375 -20.619 6.249 0.232 0.851 C15 A1JEX 15 A1JEX C16 C16 C 0 1 Y N N N N N -14.431 4.046 -19.628 4.846 -1.367 -0.018 C16 A1JEX 16 A1JEX N01 N1 N 0 1 N N N N N N -12.288 1.945 -19.204 1.476 0.089 -0.526 N01 A1JEX 17 A1JEX N02 N2 N 0 1 Y N N N N N -9.058 4.472 -18.455 -3.209 1.169 -0.806 N02 A1JEX 18 A1JEX N03 N3 N 0 1 Y N N N N N -16.797 2.997 -20.681 5.334 1.176 0.746 N03 A1JEX 19 A1JEX N04 N4 N 0 1 Y N N N N N -15.400 4.909 -20.099 6.017 -1.013 0.482 N04 A1JEX 20 A1JEX O01 O1 O 0 1 N N N N N N -14.046 0.853 -18.429 2.373 -1.778 -1.328 O01 A1JEX 21 A1JEX O02 O2 O 0 1 Y N N N N N -8.940 2.598 -17.059 -2.438 -0.400 0.476 O02 A1JEX 22 A1JEX H02 H1 H 0 1 N N N N N N -11.382 1.147 -17.467 1.861 2.153 -0.265 H02 A1JEX 23 A1JEX H01 H2 H 0 1 N N N N N N -11.956 -0.072 -18.655 2.081 1.152 1.202 H01 A1JEX 24 A1JEX H04 H3 H 0 1 N N N N N N -9.356 0.609 -18.524 -0.296 0.899 1.520 H04 A1JEX 25 A1JEX H03 H4 H 0 1 N N N N N N -10.146 0.318 -20.111 -0.194 2.583 0.907 H03 A1JEX 26 A1JEX H05 H5 H 0 1 N N N N N N -9.384 2.507 -20.418 -0.738 1.918 -1.343 H05 A1JEX 27 A1JEX H06 H6 H 0 1 N N N N N N -11.617 2.794 -21.065 -0.295 -1.016 -0.819 H06 A1JEX 28 A1JEX H07 H7 H 0 1 N N N N N N -11.659 3.946 -19.687 0.217 -0.028 -2.214 H07 A1JEX 29 A1JEX H08 H8 H 0 1 N N N N N N -7.745 2.983 -14.592 -4.275 -2.170 1.781 H08 A1JEX 30 A1JEX H09 H9 H 0 1 N N N N N N -6.913 5.153 -13.840 -6.698 -1.923 1.460 H09 A1JEX 31 A1JEX H10 H10 H 0 1 N N N N N N -7.030 7.088 -15.317 -7.586 -0.147 0.007 H10 A1JEX 32 A1JEX H11 H11 H 0 1 N N N N N N -8.013 6.873 -17.556 -6.061 1.400 -1.137 H11 A1JEX 33 A1JEX H12 H12 H 0 1 N N N N N N -15.964 1.140 -20.152 3.391 1.688 0.173 H12 A1JEX 34 A1JEX H13 H13 H 0 1 N N N N N N -17.344 5.045 -20.983 7.218 0.486 1.255 H13 A1JEX 35 A1JEX H14 H14 H 0 1 N N N N N N -13.520 4.434 -19.196 4.664 -2.388 -0.317 H14 A1JEX 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JEX O01 C01 DOUB N N 1 A1JEX C01 N01 SING N N 2 A1JEX C01 C13 SING N N 3 A1JEX N01 C02 SING N N 4 A1JEX N01 C05 SING N N 5 A1JEX C02 C03 SING N N 6 A1JEX C03 C04 SING N N 7 A1JEX C04 C05 SING N N 8 A1JEX C04 C06 SING N N 9 A1JEX C06 N02 DOUB Y N 10 A1JEX C06 O02 SING Y N 11 A1JEX N02 C07 SING Y N 12 A1JEX C07 C08 DOUB Y N 13 A1JEX C07 C12 SING Y N 14 A1JEX C08 O02 SING Y N 15 A1JEX C08 C09 SING Y N 16 A1JEX C09 C10 DOUB Y N 17 A1JEX C10 C11 SING Y N 18 A1JEX C11 C12 DOUB Y N 19 A1JEX C13 C14 DOUB Y N 20 A1JEX C13 C16 SING Y N 21 A1JEX C14 N03 SING Y N 22 A1JEX N03 C15 DOUB Y N 23 A1JEX C15 N04 SING Y N 24 A1JEX N04 C16 DOUB Y N 25 A1JEX C02 H02 SING N N 26 A1JEX C02 H01 SING N N 27 A1JEX C03 H04 SING N N 28 A1JEX C03 H03 SING N N 29 A1JEX C04 H05 SING N N 30 A1JEX C05 H06 SING N N 31 A1JEX C05 H07 SING N N 32 A1JEX C09 H08 SING N N 33 A1JEX C10 H09 SING N N 34 A1JEX C11 H10 SING N N 35 A1JEX C12 H11 SING N N 36 A1JEX C14 H12 SING N N 37 A1JEX C15 H13 SING N N 38 A1JEX C16 H14 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JEX InChI InChI 1.06 "InChI=1S/C16H14N4O2/c21-16(12-7-17-10-18-8-12)20-6-5-11(9-20)15-19-13-3-1-2-4-14(13)22-15/h1-4,7-8,10-11H,5-6,9H2/t11-/m1/s1" A1JEX InChIKey InChI 1.06 JUWYCARWXYZNFM-LLVKDONJSA-N A1JEX SMILES_CANONICAL CACTVS 3.385 "O=C(N1CC[C@@H](C1)c2oc3ccccc3n2)c4cncnc4" A1JEX SMILES CACTVS 3.385 "O=C(N1CC[CH](C1)c2oc3ccccc3n2)c4cncnc4" A1JEX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc(o2)[C@H]3CCN(C3)C(=O)c4cncnc4" A1JEX SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc(o2)C3CCN(C3)C(=O)c4cncnc4" # _pdbx_chem_comp_identifier.comp_id A1JEX _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(3~{S})-3-(1,3-benzoxazol-2-yl)pyrrolidin-1-yl]-pyrimidin-5-yl-methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JEX "Create component" 2025-06-03 PDBE A1JEX "Initial release" 2025-12-31 RCSB #