data_A1JFD # _chem_comp.id A1JFD _chem_comp.name "2-[(4~{S})-1,1,6,6-tetrakis(oxidanyl)-3-oxidanylidene-2,5$l^{3},7-trioxa-1$l^{5},6$l^{4}-divanadabicyclo[3.2.0]heptan-4-yl]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C4 H8 O10 V2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "dioxovanadium(V) complex of malic acid" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2025-06-04 _chem_comp.pdbx_modified_date 2025-08-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 317.983 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JFD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RBT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JFD V1 V1 V 0 1 N N N N N N 11.948 9.373 15.568 -0.001 1.588 -0.252 V1 A1JFD 1 A1JFD C1 C1 C 0 1 N N N N N N 15.091 12.261 15.536 -0.206 -2.169 -0.619 C1 A1JFD 2 A1JFD C2 C2 C 0 1 N N S N N N 14.196 11.391 16.474 0.788 -1.064 -0.401 C2 A1JFD 3 A1JFD C3 C3 C 0 1 N N N N N N 14.853 10.352 17.406 2.070 -1.647 0.199 C3 A1JFD 4 A1JFD C4 C4 C 0 1 N N N N N N 15.365 9.192 16.532 3.101 -0.557 0.338 C4 A1JFD 5 A1JFD O1 O1 O 0 1 N N N N N N 14.342 12.931 14.754 -1.243 -2.051 0.224 O1 A1JFD 6 A1JFD O2 O2 O 0 1 N N N N N N 16.175 11.866 15.016 -0.090 -3.048 -1.446 O2 A1JFD 7 A1JFD O3 O3 O 1 1 N N N N N N 13.444 10.696 15.467 0.256 -0.085 0.482 O3 A1JFD 8 A1JFD O4 O4 O 0 1 N N N N N N 16.676 9.128 15.922 2.838 0.570 -0.007 O4 A1JFD 9 A1JFD O5 O5 O 0 1 N N N N N N 14.377 8.358 15.991 4.311 -0.839 0.846 O5 A1JFD 10 A1JFD O6 O6 O 0 1 N N N N N N 11.811 9.163 17.189 -0.098 1.581 -2.086 O6 A1JFD 11 A1JFD O7 O7 O 0 1 N N N N N N 12.233 7.962 14.872 1.143 2.865 0.405 O7 A1JFD 12 A1JFD V2 V2 V 0 1 N N N N N N 12.420 12.499 14.878 -1.587 -0.259 0.443 V2 A1JFD 13 A1JFD O8 O8 O 0 1 N N N N N N 11.972 13.700 15.970 -2.480 -0.206 -1.163 O8 A1JFD 14 A1JFD O9 O9 O 0 1 N N N N N N 12.118 13.023 13.363 -2.508 -0.515 2.011 O9 A1JFD 15 A1JFD O10 O10 O 0 1 N N N N N N 10.836 10.952 14.669 -1.656 1.583 0.575 O10 A1JFD 16 A1JFD H1 H1 H 0 1 N N N N N N 13.544 12.051 17.065 1.017 -0.595 -1.360 H1 A1JFD 17 A1JFD H2 H2 H 0 1 N N N N N N 15.693 10.813 17.946 1.852 -2.069 1.181 H2 A1JFD 18 A1JFD H3 H3 H 0 1 N N N N N N 14.113 9.977 18.129 2.454 -2.430 -0.455 H3 A1JFD 19 A1JFD H4 H4 H 0 1 N N N N N N 14.744 7.857 15.272 4.939 -0.107 0.915 H4 A1JFD 20 A1JFD H5 H5 H 0 1 N N N N N N 11.116 8.541 17.371 -0.232 2.455 -2.476 H5 A1JFD 21 A1JFD H6 H6 H 0 1 N N N N N N 11.472 7.401 14.969 1.013 3.744 0.023 H6 A1JFD 22 A1JFD H7 H7 H 0 1 N N N N N N 11.041 13.635 16.148 -3.426 -0.391 -1.094 H7 A1JFD 23 A1JFD H8 H8 H 0 1 N N N N N N 11.195 12.914 13.168 -3.456 -0.658 1.891 H8 A1JFD 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JFD V1 O3 SING N N 1 A1JFD V1 O6 SING N N 2 A1JFD V1 O7 SING N N 3 A1JFD V1 O10 SING N N 4 A1JFD C1 C2 SING N N 5 A1JFD C1 O1 SING N N 6 A1JFD C1 O2 DOUB N N 7 A1JFD C2 C3 SING N N 8 A1JFD C2 O3 SING N N 9 A1JFD C3 C4 SING N N 10 A1JFD C4 O4 DOUB N N 11 A1JFD C4 O5 SING N N 12 A1JFD O1 V2 SING N N 13 A1JFD O3 V2 SING N N 14 A1JFD V2 O8 SING N N 15 A1JFD V2 O9 SING N N 16 A1JFD V2 O10 SING N N 17 A1JFD C2 H1 SING N N 18 A1JFD C3 H2 SING N N 19 A1JFD C3 H3 SING N N 20 A1JFD O5 H4 SING N N 21 A1JFD O6 H5 SING N N 22 A1JFD O7 H6 SING N N 23 A1JFD O8 H7 SING N N 24 A1JFD O9 H8 SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JFD InChI InChI 1.06 "InChI=1S/C4H5O5.4H2O.O.2V/c5-2(4(8)9)1-3(6)7;;;;;;;/h2H,1H2,(H,6,7)(H,8,9);4*1H2;;;/q+1;;;;;;+2;+3/p-5/t2-;;;;;;;/m0......./s1" A1JFD InChIKey InChI 1.06 SZLWDXFDQGIOCQ-DXXUISRYSA-I A1JFD SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@@H]1[O+]2[V](O)(O)O[V]2(O)(O)OC1=O" A1JFD SMILES CACTVS 3.385 "OC(=O)C[CH]1[O+]2[V](O)(O)O[V]2(O)(O)OC1=O" A1JFD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C([C@H]1C(=O)O[V]2([O+]1[V](O2)(O)O)(O)O)C(=O)O" A1JFD SMILES "OpenEye OEToolkits" 2.0.7 "C(C1C(=O)O[V]2([O+]1[V](O2)(O)O)(O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1JFD _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(4~{S})-1,1,6,6-tetrakis(oxidanyl)-3-oxidanylidene-2,7-dioxa-5-oxonia-1$l^{5},6$l^{4}-divanadabicyclo[3.2.0]heptan-4-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JFD "Create component" 2025-06-04 PDBE A1JFD "Modify synonyms" 2025-06-04 PDBE A1JFD "Initial release" 2025-08-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1JFD _pdbx_chem_comp_synonyms.name "dioxovanadium(V) complex of malic acid" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #