data_A1JFJ # _chem_comp.id A1JFJ _chem_comp.name "2-[(2~{E})-2-[1-(4-aminophenyl)ethylidene]hydrazinyl]-6-methyl-1~{H}-pyrimidin-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-04 _chem_comp.pdbx_modified_date 2025-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 257.291 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JFJ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RFE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JFJ C4 C1 C 0 1 N N N N N N 9.116 -6.372 12.615 -3.292 -1.652 -0.003 C4 A1JFJ 1 A1JFJ C5 C2 C 0 1 N N N N N N 10.285 -6.741 11.861 -4.561 -1.017 0.002 C5 A1JFJ 2 A1JFJ C6 C3 C 0 1 N N N N N N 11.251 -5.841 11.621 -4.616 0.332 0.002 C6 A1JFJ 3 A1JFJ C11 C4 C 0 1 Y N N N N N 14.251 1.623 12.868 5.009 -0.747 -0.000 C11 A1JFJ 4 A1JFJ C7 C5 C 0 1 N N N N N N 12.499 -6.092 10.829 -5.947 1.039 0.008 C7 A1JFJ 5 A1JFJ C8 C6 C 0 1 Y N N N N N 11.938 0.037 13.081 2.548 0.527 -0.000 C8 A1JFJ 6 A1JFJ C9 C7 C 0 1 Y N N N N N 13.157 -0.402 13.593 2.614 -0.869 -0.000 C9 A1JFJ 7 A1JFJ C10 C8 C 0 1 Y N N N N N 14.295 0.372 13.494 3.839 -1.498 -0.000 C10 A1JFJ 8 A1JFJ C12 C9 C 0 1 Y N N N N N 13.028 2.069 12.357 4.947 0.642 -0.000 C12 A1JFJ 9 A1JFJ C13 C10 C 0 1 Y N N N N N 11.896 1.287 12.468 3.726 1.279 -0.000 C13 A1JFJ 10 A1JFJ N1 N1 N 0 1 N N N N N N 10.905 -2.078 13.079 0.145 0.505 -0.001 N1 A1JFJ 11 A1JFJ N2 N2 N 0 1 N N N N N N 9.912 -2.945 13.336 -1.099 1.150 -0.002 N2 A1JFJ 12 A1JFJ C3 C11 C 0 1 N N N N N N 10.016 -4.227 12.863 -2.253 0.411 -0.002 C3 A1JFJ 13 A1JFJ N3 N3 N 0 1 N N N N N N 9.019 -5.087 13.107 -2.179 -0.905 -0.002 N3 A1JFJ 14 A1JFJ C1 C12 C 0 1 N N N N N N 9.379 -0.157 13.416 1.170 2.711 -0.001 C1 A1JFJ 15 A1JFJ C2 C13 C 0 1 N N N N N N 10.713 -0.804 13.191 1.239 1.205 -0.001 C2 A1JFJ 16 A1JFJ O1 O1 O 0 1 N N N N N N 8.207 -7.188 12.866 -3.214 -2.871 -0.002 O1 A1JFJ 17 A1JFJ N4 N4 N 0 1 N N N N N N 11.096 -4.566 12.119 -3.454 1.048 -0.003 N4 A1JFJ 18 A1JFJ N5 N5 N 0 1 N N N N N N 15.384 2.401 12.761 6.248 -1.388 0.005 N5 A1JFJ 19 A1JFJ H1 H1 H 0 1 N N N N N N 10.385 -7.749 11.486 -5.467 -1.604 0.006 H1 A1JFJ 20 A1JFJ H2 H2 H 0 1 N N N N N N 13.105 -5.175 10.799 -6.750 0.302 0.012 H2 A1JFJ 21 A1JFJ H3 H3 H 0 1 N N N N N N 13.078 -6.898 11.303 -6.023 1.664 0.898 H3 A1JFJ 22 A1JFJ H4 H4 H 0 1 N N N N N N 12.230 -6.387 9.804 -6.031 1.663 -0.882 H4 A1JFJ 23 A1JFJ H5 H5 H 0 1 N N N N N N 13.212 -1.366 14.076 1.705 -1.453 -0.000 H5 A1JFJ 24 A1JFJ H6 H6 H 0 1 N N N N N N 15.227 0.010 13.903 3.891 -2.577 -0.001 H6 A1JFJ 25 A1JFJ H7 H7 H 0 1 N N N N N N 12.969 3.032 11.872 5.858 1.223 0.000 H7 A1JFJ 26 A1JFJ H8 H8 H 0 1 N N N N N N 10.960 1.651 12.072 3.679 2.358 -0.001 H8 A1JFJ 27 A1JFJ H9 H9 H 0 1 N N N N N N 9.111 -2.660 13.863 -1.143 2.119 -0.002 H9 A1JFJ 28 A1JFJ H10 H10 H 0 1 N N N N N N 9.505 0.934 13.472 1.153 3.074 -1.029 H10 A1JFJ 29 A1JFJ H11 H11 H 0 1 N N N N N N 8.706 -0.406 12.582 0.264 3.033 0.513 H11 A1JFJ 30 A1JFJ H12 H12 H 0 1 N N N N N N 8.947 -0.525 14.358 2.042 3.114 0.513 H12 A1JFJ 31 A1JFJ H13 H13 H 0 1 N N N N N N 11.795 -3.877 11.927 -3.486 2.018 -0.003 H13 A1JFJ 32 A1JFJ H14 H14 H 0 1 N N N N N N 16.157 1.924 13.179 6.292 -2.357 0.010 H14 A1JFJ 33 A1JFJ H15 H15 H 0 1 N N N N N N 15.581 2.572 11.796 7.065 -0.865 0.005 H15 A1JFJ 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JFJ C7 C6 SING N N 1 A1JFJ C6 C5 DOUB N N 2 A1JFJ C6 N4 SING N N 3 A1JFJ C5 C4 SING N N 4 A1JFJ N4 C3 SING N N 5 A1JFJ C12 C13 DOUB Y N 6 A1JFJ C12 C11 SING Y N 7 A1JFJ C13 C8 SING Y N 8 A1JFJ C4 O1 DOUB N N 9 A1JFJ C4 N3 SING N N 10 A1JFJ N5 C11 SING N N 11 A1JFJ C3 N3 DOUB N N 12 A1JFJ C3 N2 SING N N 13 A1JFJ C11 C10 DOUB Y N 14 A1JFJ N1 C2 DOUB N E 15 A1JFJ N1 N2 SING N N 16 A1JFJ C8 C2 SING N N 17 A1JFJ C8 C9 DOUB Y N 18 A1JFJ C2 C1 SING N N 19 A1JFJ C10 C9 SING Y N 20 A1JFJ C5 H1 SING N N 21 A1JFJ C7 H2 SING N N 22 A1JFJ C7 H3 SING N N 23 A1JFJ C7 H4 SING N N 24 A1JFJ C9 H5 SING N N 25 A1JFJ C10 H6 SING N N 26 A1JFJ C12 H7 SING N N 27 A1JFJ C13 H8 SING N N 28 A1JFJ N2 H9 SING N N 29 A1JFJ C1 H10 SING N N 30 A1JFJ C1 H11 SING N N 31 A1JFJ C1 H12 SING N N 32 A1JFJ N4 H13 SING N N 33 A1JFJ N5 H14 SING N N 34 A1JFJ N5 H15 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JFJ InChI InChI 1.06 "InChI=1S/C13H15N5O/c1-8-7-12(19)16-13(15-8)18-17-9(2)10-3-5-11(14)6-4-10/h3-7H,14H2,1-2H3,(H2,15,16,18,19)/b17-9+" A1JFJ InChIKey InChI 1.06 BIKKGLWZIUKTFP-RQZCQDPDSA-N A1JFJ SMILES_CANONICAL CACTVS 3.385 "CC1=CC(=O)N=C(N\N=C(C)\c2ccc(N)cc2)N1" A1JFJ SMILES CACTVS 3.385 "CC1=CC(=O)N=C(NN=C(C)c2ccc(N)cc2)N1" A1JFJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)N=C(N1)N/N=C(\C)/c2ccc(cc2)N" A1JFJ SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CC(=O)N=C(N1)NN=C(C)c2ccc(cc2)N" # _pdbx_chem_comp_identifier.comp_id A1JFJ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[(2~{E})-2-[1-(4-aminophenyl)ethylidene]hydrazinyl]-6-methyl-1~{H}-pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JFJ "Create component" 2025-06-04 PDBE A1JFJ "Initial release" 2025-09-24 RCSB #