data_A1JG2 # _chem_comp.id A1JG2 _chem_comp.name "~{N}-[(5~{R},6~{S},9~{S},10~{S},11~{R})-2-butan-2-ylidene-5,11-dimethyl-10-oxidanyl-3,7,12-tris(oxidanylidene)-9-(pyridin-3-ylmethyl)-1,4-dioxa-8-azacyclododec-6-yl]-4-oxidanyl-1,2,5-thiadiazole-3-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 N5 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-16 _chem_comp.pdbx_modified_date 2026-02-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 547.581 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JG2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RJP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JG2 C4 C1 C 0 1 N N N N N N 38.285 6.825 48.736 -5.379 3.491 -0.285 C4 A1JG2 1 A1JG2 C5 C2 C 0 1 N N N N N N 38.653 6.517 46.278 -4.300 1.275 -0.321 C5 A1JG2 2 A1JG2 C7 C3 C 0 1 N N N N N N 38.062 8.163 44.726 -3.439 -0.867 0.022 C7 A1JG2 3 A1JG2 C10 C4 C 0 1 N N N N N N 39.286 10.134 43.866 -4.552 -3.020 -0.492 C10 A1JG2 4 A1JG2 C13 C5 C 0 1 N N S N N N 36.863 7.974 41.730 -0.775 -2.539 -0.082 C13 A1JG2 5 A1JG2 C15 C6 C 0 1 Y N N N N N 35.233 7.235 39.906 1.610 -3.216 -0.206 C15 A1JG2 6 A1JG2 C17 C7 C 0 1 Y N N N N N 33.536 5.610 39.442 3.704 -2.143 0.170 C17 A1JG2 7 A1JG2 C20 C8 C 0 1 Y N N N N N 35.943 6.693 38.849 2.048 -3.539 -1.476 C20 A1JG2 8 A1JG2 C22 C9 C 0 1 N N N N N N 36.851 5.633 42.445 0.070 -0.295 -0.069 C22 A1JG2 9 A1JG2 C24 C10 C 0 1 N N S N N N 36.086 4.546 43.194 0.413 1.002 0.620 C24 A1JG2 10 A1JG2 C26 C11 C 0 1 N N N N N N 34.340 3.242 42.086 2.847 1.022 0.725 C26 A1JG2 11 A1JG2 C28 C12 C 0 1 Y N N N N N 34.052 2.435 40.880 4.160 1.500 0.250 C28 A1JG2 12 A1JG2 C1 C13 C 0 1 N N N N N N 40.346 9.047 47.557 -7.474 1.041 0.574 C1 A1JG2 13 A1JG2 C2 C14 C 0 1 N N N N N N 40.431 7.545 47.639 -6.730 1.304 -0.737 C2 A1JG2 14 A1JG2 C3 C15 C 0 1 N N N N N N 39.101 6.923 47.477 -5.423 1.993 -0.442 C3 A1JG2 15 A1JG2 O6 O1 O 0 1 N N N N N N 38.993 7.230 45.129 -4.318 -0.052 -0.572 O6 A1JG2 16 A1JG2 O8 O2 O 0 1 N N N N N N 37.029 8.346 45.309 -2.824 -0.492 0.990 O8 A1JG2 17 A1JG2 C9 C16 C 0 1 N N R N N N 38.521 8.873 43.470 -3.225 -2.254 -0.526 C9 A1JG2 18 A1JG2 C11 C17 C 0 1 N N S N N N 37.352 9.176 42.519 -2.181 -3.013 0.287 C11 A1JG2 19 A1JG2 O12 O3 O 0 1 N N N N N N 36.295 9.821 43.221 -2.410 -2.844 1.684 O12 A1JG2 20 A1JG2 C14 C18 C 0 1 N N N N N N 35.789 8.385 40.710 0.239 -3.636 0.259 C14 A1JG2 21 A1JG2 C16 C19 C 0 1 Y N N N N N 34.005 6.669 40.194 2.449 -2.505 0.638 C16 A1JG2 22 A1JG2 C18 C20 C 0 1 Y N N N N N 34.322 5.145 38.410 4.073 -2.502 -1.112 C18 A1JG2 23 A1JG2 N19 N1 N 0 1 Y N N N N N 35.513 5.669 38.104 3.248 -3.178 -1.887 N19 A1JG2 24 A1JG2 N21 N2 N 0 1 N N N N N N 36.370 6.876 42.553 -0.458 -1.311 0.693 N21 A1JG2 25 A1JG2 O23 O4 O 0 1 N N N N N N 37.811 5.348 41.735 0.257 -0.431 -1.259 O23 A1JG2 26 A1JG2 N25 N3 N 0 1 N N N N N N 35.622 3.592 42.205 1.716 1.477 0.149 N25 A1JG2 27 A1JG2 O27 O5 O 0 1 N N N N N N 33.467 3.541 42.900 2.786 0.218 1.635 O27 A1JG2 28 A1JG2 N29 N4 N 0 1 Y N N N N N 32.791 2.081 40.506 4.285 2.367 -0.727 N29 A1JG2 29 A1JG2 S30 S1 S 0 1 Y N N N N N 32.900 1.334 39.087 5.803 2.646 -0.965 S30 A1JG2 30 A1JG2 N31 N5 N 0 1 Y N N N N N 34.473 1.392 38.841 6.406 1.615 0.236 N31 A1JG2 31 A1JG2 C32 C21 C 0 1 Y N N N N N 35.008 1.992 39.841 5.362 1.070 0.810 C32 A1JG2 32 A1JG2 O33 O6 O 0 1 N N N N N N 36.324 2.179 39.918 5.443 0.178 1.830 O33 A1JG2 33 A1JG2 C34 C22 C 0 1 N N R N N N 36.932 3.913 44.304 -0.661 2.045 0.292 C34 A1JG2 34 A1JG2 C35 C23 C 0 1 N N N N N N 37.771 2.730 43.874 -0.152 2.963 -0.823 C35 A1JG2 35 A1JG2 O36 O7 O 0 1 N N N N N N 37.841 4.973 44.734 -1.863 1.364 -0.144 O36 A1JG2 36 A1JG2 C37 C24 C 0 1 N N N N N N 37.849 5.296 46.038 -3.048 1.970 0.035 C37 A1JG2 37 A1JG2 O38 O8 O 0 1 N N N N N N 37.274 4.667 46.893 -3.102 3.092 0.503 O38 A1JG2 38 A1JG2 H4C H1 H 0 1 N N N N N N 37.318 6.351 48.511 -6.360 3.909 -0.512 H4C A1JG2 39 A1JG2 H4B H2 H 0 1 N N N N N N 38.827 6.220 49.478 -5.105 3.741 0.739 H4B A1JG2 40 A1JG2 H4A H3 H 0 1 N N N N N N 38.113 7.833 49.141 -4.640 3.907 -0.971 H4A A1JG2 41 A1JG2 H10C H4 H 0 0 N N N N N N 39.624 10.658 42.960 -5.289 -2.496 -1.100 H10C A1JG2 42 A1JG2 H10B H5 H 0 0 N N N N N N 38.627 10.795 44.447 -4.402 -4.024 -0.888 H10B A1JG2 43 A1JG2 H10A H6 H 0 0 N N N N N N 40.158 9.857 44.477 -4.908 -3.084 0.536 H10A A1JG2 44 A1JG2 H13 H7 H 0 1 N N N N N N 37.721 7.599 41.153 -0.731 -2.329 -1.151 H13 A1JG2 45 A1JG2 H17 H8 H 0 1 N N N N N N 32.579 5.158 39.657 4.383 -1.589 0.800 H17 A1JG2 46 A1JG2 H20 H9 H 0 1 N N N N N N 36.904 7.124 38.611 1.401 -4.093 -2.139 H20 A1JG2 47 A1JG2 H24 H10 H 0 1 N N N N N N 35.212 5.017 43.668 0.449 0.844 1.697 H24 A1JG2 48 A1JG2 H1C H11 H 0 1 N N N N N N 41.350 9.479 47.681 -6.865 0.406 1.217 H1C A1JG2 49 A1JG2 H1B H12 H 0 1 N N N N N N 39.940 9.338 46.577 -7.668 1.988 1.078 H1B A1JG2 50 A1JG2 H1A H13 H 0 1 N N N N N N 39.685 9.421 48.353 -8.420 0.543 0.361 H1A A1JG2 51 A1JG2 H2B H14 H 0 1 N N N N N N 41.097 7.180 46.843 -6.536 0.357 -1.240 H2B A1JG2 52 A1JG2 H2A H15 H 0 1 N N N N N N 40.842 7.262 48.619 -7.339 1.939 -1.379 H2A A1JG2 53 A1JG2 H9 H16 H 0 1 N N N N N N 39.219 8.208 42.940 -2.889 -2.178 -1.564 H9 A1JG2 54 A1JG2 H11 H17 H 0 1 N N N N N N 37.740 9.892 41.780 -2.260 -4.082 0.049 H11 A1JG2 55 A1JG2 H12 H18 H 0 1 N N N N N N 36.261 9.495 44.113 -3.274 -3.162 1.982 H12 A1JG2 56 A1JG2 H14A H19 H 0 0 N N N N N N 34.959 8.860 41.254 0.254 -3.795 1.337 H14A A1JG2 57 A1JG2 H14B H20 H 0 0 N N N N N N 36.234 9.111 40.013 -0.045 -4.562 -0.241 H14B A1JG2 58 A1JG2 H16 H21 H 0 1 N N N N N N 33.411 7.056 41.009 2.133 -2.238 1.636 H16 A1JG2 59 A1JG2 H18 H22 H 0 1 N N N N N N 33.958 4.317 37.820 5.048 -2.224 -1.484 H18 A1JG2 60 A1JG2 H21 H23 H 0 1 N N N N N N 35.648 7.059 43.220 -0.602 -1.229 1.650 H21 A1JG2 61 A1JG2 H25 H24 H 0 1 N N N N N N 36.291 3.179 41.587 1.765 2.118 -0.577 H25 A1JG2 62 A1JG2 H33 H25 H 0 1 N N N N N N 36.742 1.809 39.149 5.441 0.582 2.708 H33 A1JG2 63 A1JG2 H34 H26 H 0 1 N N N N N N 36.276 3.615 45.135 -0.874 2.637 1.182 H34 A1JG2 64 A1JG2 H35B H27 H 0 0 N N N N N N 38.338 2.349 44.736 0.064 2.369 -1.711 H35B A1JG2 65 A1JG2 H35A H28 H 0 0 N N N N N N 37.115 1.936 43.487 -0.914 3.705 -1.058 H35A A1JG2 66 A1JG2 H35C H29 H 0 0 N N N N N N 38.471 3.044 43.085 0.757 3.466 -0.492 H35C A1JG2 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JG2 C1 C2 SING N N 1 A1JG2 C2 C3 SING N N 2 A1JG2 C3 C4 SING N N 3 A1JG2 C3 C5 DOUB N Z 4 A1JG2 C5 O6 SING N N 5 A1JG2 O6 C7 SING N N 6 A1JG2 C7 O8 DOUB N N 7 A1JG2 C7 C9 SING N N 8 A1JG2 C9 C10 SING N N 9 A1JG2 C9 C11 SING N N 10 A1JG2 C11 O12 SING N N 11 A1JG2 C11 C13 SING N N 12 A1JG2 C13 C14 SING N N 13 A1JG2 C14 C15 SING N N 14 A1JG2 C15 C16 DOUB Y N 15 A1JG2 C16 C17 SING Y N 16 A1JG2 C17 C18 DOUB Y N 17 A1JG2 C18 N19 SING Y N 18 A1JG2 N19 C20 DOUB Y N 19 A1JG2 C13 N21 SING N N 20 A1JG2 N21 C22 SING N N 21 A1JG2 C22 O23 DOUB N N 22 A1JG2 C22 C24 SING N N 23 A1JG2 C24 N25 SING N N 24 A1JG2 N25 C26 SING N N 25 A1JG2 C26 O27 DOUB N N 26 A1JG2 C26 C28 SING N N 27 A1JG2 C28 N29 DOUB Y N 28 A1JG2 N29 S30 SING Y N 29 A1JG2 S30 N31 SING Y N 30 A1JG2 N31 C32 DOUB Y N 31 A1JG2 C32 O33 SING N N 32 A1JG2 C24 C34 SING N N 33 A1JG2 C34 C35 SING N N 34 A1JG2 C34 O36 SING N N 35 A1JG2 O36 C37 SING N N 36 A1JG2 C37 O38 DOUB N N 37 A1JG2 C37 C5 SING N N 38 A1JG2 C20 C15 SING Y N 39 A1JG2 C32 C28 SING Y N 40 A1JG2 C4 H4C SING N N 41 A1JG2 C4 H4B SING N N 42 A1JG2 C4 H4A SING N N 43 A1JG2 C10 H10C SING N N 44 A1JG2 C10 H10B SING N N 45 A1JG2 C10 H10A SING N N 46 A1JG2 C13 H13 SING N N 47 A1JG2 C17 H17 SING N N 48 A1JG2 C20 H20 SING N N 49 A1JG2 C24 H24 SING N N 50 A1JG2 C1 H1C SING N N 51 A1JG2 C1 H1B SING N N 52 A1JG2 C1 H1A SING N N 53 A1JG2 C2 H2B SING N N 54 A1JG2 C2 H2A SING N N 55 A1JG2 C9 H9 SING N N 56 A1JG2 C11 H11 SING N N 57 A1JG2 O12 H12 SING N N 58 A1JG2 C14 H14A SING N N 59 A1JG2 C14 H14B SING N N 60 A1JG2 C16 H16 SING N N 61 A1JG2 C18 H18 SING N N 62 A1JG2 N21 H21 SING N N 63 A1JG2 N25 H25 SING N N 64 A1JG2 O33 H33 SING N N 65 A1JG2 C34 H34 SING N N 66 A1JG2 C35 H35B SING N N 67 A1JG2 C35 H35A SING N N 68 A1JG2 C35 H35C SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JG2 InChI InChI 1.06 "InChI=1S/C24H29N5O8S/c1-5-11(2)19-24(35)36-13(4)16(27-21(32)17-22(33)29-38-28-17)20(31)26-15(9-14-7-6-8-25-10-14)18(30)12(3)23(34)37-19/h6-8,10,12-13,15-16,18,30H,5,9H2,1-4H3,(H,26,31)(H,27,32)(H,29,33)/b19-11-" A1JG2 InChIKey InChI 1.06 ABSWTSVYTVMXJK-ODLFYWEKSA-N A1JG2 SMILES_CANONICAL CACTVS 3.385 "CCC(/C)=C1\OC(=O)[C@H](C)[C@H](O)[C@H](Cc2cccnc2)NC(=O)[C@@H](NC(=O)c3nsnc3O)[C@@H](C)OC1=O" A1JG2 SMILES CACTVS 3.385 "CCC(C)=C1OC(=O)[CH](C)[CH](O)[CH](Cc2cccnc2)NC(=O)[CH](NC(=O)c3nsnc3O)[CH](C)OC1=O" A1JG2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=C1C(=O)O[C@@H]([C@@H](C(=O)N[C@H]([C@H]([C@H](C(=O)O1)C)O)Cc2cccnc2)NC(=O)c3c(nsn3)O)C)C" A1JG2 SMILES "OpenEye OEToolkits" 2.0.7 "CCC(=C1C(=O)OC(C(C(=O)NC(C(C(C(=O)O1)C)O)Cc2cccnc2)NC(=O)c3c(nsn3)O)C)C" # _pdbx_chem_comp_identifier.comp_id A1JG2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(5~{R},6~{S},9~{S},10~{S},11~{R})-2-butan-2-ylidene-5,11-dimethyl-10-oxidanyl-3,7,12-tris(oxidanylidene)-9-(pyridin-3-ylmethyl)-1,4-dioxa-8-azacyclododec-6-yl]-4-oxidanyl-1,2,5-thiadiazole-3-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JG2 "Create component" 2025-06-16 PDBE A1JG2 "Initial release" 2026-02-11 RCSB #