data_A1JGN # _chem_comp.id A1JGN _chem_comp.name "(4~{R})-~{N}-(3-cyclopropylphenyl)-2-oxidanylidene-3,4-dihydro-1~{H}-1,8-naphthyridine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-12 _chem_comp.pdbx_modified_date 2025-07-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 307.346 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JGN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RIZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JGN C10 C1 C 0 1 Y N N N N N -17.620 -7.260 -25.291 -3.672 -0.060 -0.383 C10 A1JGN 1 A1JGN C15 C2 C 0 1 Y N N N N N -21.339 -4.696 -28.942 1.817 -0.140 0.121 C15 A1JGN 2 A1JGN C17 C3 C 0 1 Y N N N N N -22.628 -3.406 -30.523 4.180 0.265 0.105 C17 A1JGN 3 A1JGN C20 C4 C 0 1 N N N N N N -23.534 -1.085 -31.721 6.616 -0.575 0.421 C20 A1JGN 4 A1JGN C21 C5 C 0 1 Y N N N N N -22.059 -4.121 -31.598 4.134 0.470 -1.262 C21 A1JGN 5 A1JGN C22 C6 C 0 1 Y N N N N N -21.160 -5.159 -31.321 2.933 0.366 -1.940 C22 A1JGN 6 A1JGN O01 O1 O 0 1 N N N N N N -18.744 -5.438 -27.921 -0.585 0.783 -0.555 O01 A1JGN 7 A1JGN C02 C7 C 0 1 N N N N N N -19.611 -5.246 -27.100 -0.529 0.094 0.441 C02 A1JGN 8 A1JGN C03 C8 C 0 1 N N R N N N -19.403 -5.374 -25.564 -1.773 -0.155 1.255 C03 A1JGN 9 A1JGN C04 C9 C 0 1 N N N N N N -18.668 -4.608 -25.147 -2.059 -1.660 1.303 C04 A1JGN 10 A1JGN C05 C10 C 0 1 Y N N N N N -19.007 -6.923 -25.349 -2.939 0.557 0.625 C05 A1JGN 11 A1JGN C06 C11 C 0 1 Y N N N N N -20.013 -7.915 -25.220 -3.291 1.827 1.041 C06 A1JGN 12 A1JGN C07 C12 C 0 1 Y N N N N N -19.557 -9.250 -25.038 -4.375 2.445 0.431 C07 A1JGN 13 A1JGN C08 C13 C 0 1 Y N N N N N -18.149 -9.547 -25.041 -5.060 1.776 -0.564 C08 A1JGN 14 A1JGN N09 N1 N 0 1 Y N N N N N -17.232 -8.571 -25.160 -4.699 0.564 -0.940 N09 A1JGN 15 A1JGN N11 N2 N 0 1 N N N N N N -16.655 -6.256 -25.476 -3.317 -1.339 -0.810 N11 A1JGN 16 A1JGN C12 C14 C 0 1 N N N N N N -16.938 -4.941 -25.454 -2.545 -2.128 -0.042 C12 A1JGN 17 A1JGN O13 O2 O 0 1 N N N N N N -16.128 -4.087 -25.713 -2.238 -3.232 -0.438 O13 A1JGN 18 A1JGN N14 N3 N 0 1 N N N N N N -20.980 -4.896 -27.536 0.645 -0.449 0.820 N14 A1JGN 19 A1JGN C16 C15 C 0 1 Y N N N N N -22.258 -3.674 -29.210 3.025 -0.040 0.798 C16 A1JGN 20 A1JGN C18 C16 C 0 1 N N N N N N -23.631 -2.294 -30.820 5.492 0.375 0.839 C18 A1JGN 21 A1JGN C19 C17 C 0 1 N N N N N N -24.556 -2.184 -32.050 6.695 0.910 0.060 C19 A1JGN 22 A1JGN C23 C18 C 0 1 Y N N N N N -20.777 -5.445 -30.014 1.775 0.061 -1.253 C23 A1JGN 23 A1JGN H202 H1 H 0 0 N N N N N N -22.650 -0.949 -32.362 7.284 -0.939 1.201 H202 A1JGN 24 A1JGN H201 H2 H 0 0 N N N N N N -23.880 -0.105 -31.361 6.408 -1.278 -0.385 H201 A1JGN 25 A1JGN H211 H3 H 0 0 N N N N N N -22.312 -3.872 -32.618 5.039 0.708 -1.802 H211 A1JGN 26 A1JGN H221 H4 H 0 0 N N N N N N -20.758 -5.746 -32.134 2.901 0.526 -3.007 H221 A1JGN 27 A1JGN H031 H5 H 0 0 N N N N N N -20.402 -5.267 -25.117 -1.625 0.219 2.268 H031 A1JGN 28 A1JGN H042 H6 H 0 0 N N N N N N -18.908 -3.632 -25.594 -1.145 -2.194 1.565 H042 A1JGN 29 A1JGN H041 H7 H 0 0 N N N N N N -18.814 -4.559 -24.058 -2.822 -1.859 2.055 H041 A1JGN 30 A1JGN H061 H8 H 0 0 N N N N N N -21.064 -7.671 -25.258 -2.737 2.326 1.822 H061 A1JGN 31 A1JGN H071 H9 H 0 0 N N N N N N -20.273 -10.046 -24.897 -4.678 3.437 0.731 H071 A1JGN 32 A1JGN H081 H10 H 0 0 N N N N N N -17.823 -10.572 -24.946 -5.903 2.252 -1.042 H081 A1JGN 33 A1JGN H111 H11 H 0 0 N N N N N N -15.707 -6.534 -25.632 -3.631 -1.663 -1.669 H111 A1JGN 34 A1JGN H141 H12 H 0 0 N N N N N N -21.691 -4.791 -26.841 0.677 -1.054 1.578 H141 A1JGN 35 A1JGN H161 H13 H 0 0 N N N N N N -22.678 -3.096 -28.400 3.061 -0.199 1.865 H161 A1JGN 36 A1JGN H181 H14 H 0 0 N N N N N N -24.194 -2.043 -29.909 5.419 0.635 1.895 H181 A1JGN 37 A1JGN H192 H15 H 0 0 N N N N N N -24.402 -2.841 -32.919 7.414 1.523 0.603 H192 A1JGN 38 A1JGN H191 H16 H 0 0 N N N N N N -25.632 -1.997 -31.918 6.537 1.183 -0.984 H191 A1JGN 39 A1JGN H231 H17 H 0 0 N N N N N N -20.060 -6.228 -29.815 0.838 -0.021 -1.783 H231 A1JGN 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JGN C02 O01 DOUB N N 1 A1JGN C04 C03 SING N N 2 A1JGN C05 C03 SING N N 3 A1JGN C06 C05 DOUB Y N 4 A1JGN C07 C06 SING Y N 5 A1JGN C08 C07 DOUB Y N 6 A1JGN N09 C08 SING Y N 7 A1JGN C10 N09 DOUB Y N 8 A1JGN N11 C10 SING N N 9 A1JGN C12 N11 SING N N 10 A1JGN O13 C12 DOUB N N 11 A1JGN C03 C02 SING N N 12 A1JGN N14 C02 SING N N 13 A1JGN C15 N14 SING N N 14 A1JGN C16 C15 DOUB Y N 15 A1JGN C17 C16 SING Y N 16 A1JGN C19 C18 SING N N 17 A1JGN C20 C19 SING N N 18 A1JGN C18 C17 SING N N 19 A1JGN C21 C17 DOUB Y N 20 A1JGN C22 C21 SING Y N 21 A1JGN C23 C22 DOUB Y N 22 A1JGN C04 C12 SING N N 23 A1JGN C05 C10 SING Y N 24 A1JGN C15 C23 SING Y N 25 A1JGN C18 C20 SING N N 26 A1JGN C20 H202 SING N N 27 A1JGN C20 H201 SING N N 28 A1JGN C21 H211 SING N N 29 A1JGN C22 H221 SING N N 30 A1JGN C03 H031 SING N N 31 A1JGN C04 H042 SING N N 32 A1JGN C04 H041 SING N N 33 A1JGN C06 H061 SING N N 34 A1JGN C07 H071 SING N N 35 A1JGN C08 H081 SING N N 36 A1JGN N11 H111 SING N N 37 A1JGN N14 H141 SING N N 38 A1JGN C16 H161 SING N N 39 A1JGN C18 H181 SING N N 40 A1JGN C19 H192 SING N N 41 A1JGN C19 H191 SING N N 42 A1JGN C23 H231 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JGN InChI InChI 1.06 "InChI=1S/C18H17N3O2/c22-16-10-15(14-5-2-8-19-17(14)21-16)18(23)20-13-4-1-3-12(9-13)11-6-7-11/h1-5,8-9,11,15H,6-7,10H2,(H,20,23)(H,19,21,22)/t15-/m1/s1" A1JGN InChIKey InChI 1.06 BALOQYJNAMGVIL-OAHLLOKOSA-N A1JGN SMILES_CANONICAL CACTVS 3.385 "O=C1C[C@@H](C(=O)Nc2cccc(c2)C3CC3)c4cccnc4N1" A1JGN SMILES CACTVS 3.385 "O=C1C[CH](C(=O)Nc2cccc(c2)C3CC3)c4cccnc4N1" A1JGN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)[C@@H]2CC(=O)Nc3c2cccn3)C4CC4" A1JGN SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)NC(=O)C2CC(=O)Nc3c2cccn3)C4CC4" # _pdbx_chem_comp_identifier.comp_id A1JGN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{R})-~{N}-(3-cyclopropylphenyl)-2-oxidanylidene-3,4-dihydro-1~{H}-1,8-naphthyridine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JGN "Create component" 2025-06-12 PDBE A1JGN "Initial release" 2025-07-09 RCSB #