data_A1JI6 # _chem_comp.id A1JI6 _chem_comp.name "[(2~{E},6~{E},10~{E},14~{E})-3,7,11,15,19-pentamethylicosa-2,6,10,14,18-pentaenyl]sulfanyl-phosphonooxy-phosphinic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H44 O6 P2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-30 _chem_comp.pdbx_modified_date 2025-09-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 534.626 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JI6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RS2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JI6 C13 C1 C 0 1 N N N N N N 35.827 -20.369 -8.955 -3.614 3.286 0.308 C13 A1JI6 1 A1JI6 C15 C2 C 0 1 N N N N N N 34.653 -20.380 -9.872 -2.143 2.978 0.428 C15 A1JI6 2 A1JI6 C17 C3 C 0 1 N N N N N N 34.009 -22.693 -9.381 -0.141 2.185 -0.801 C17 A1JI6 3 A1JI6 C20 C4 C 0 1 N N N N N N 33.314 -24.324 -11.292 -0.659 -0.106 -1.466 C20 A1JI6 4 A1JI6 C21 C5 C 0 1 N N N N N N 33.778 -26.050 -8.591 2.223 0.133 0.198 C21 A1JI6 5 A1JI6 C22 C6 C 0 1 N N N N N N 34.817 -25.635 -7.626 3.706 -0.131 0.176 C22 A1JI6 6 A1JI6 C24 C7 C 0 1 N N N N N N 37.364 -25.257 -7.366 5.950 0.083 1.114 C24 A1JI6 7 A1JI6 C26 C8 C 0 1 N N N N N N 37.543 -23.757 -7.425 6.749 1.102 0.299 C26 A1JI6 8 A1JI6 C28 C9 C 0 1 N N N N N N 39.831 -22.694 -6.970 8.868 0.511 -0.759 C28 A1JI6 9 A1JI6 O4 O1 O 0 1 N N N N N N 39.263 -15.788 -8.732 -9.306 -3.032 0.599 O4 A1JI6 10 A1JI6 P1 P1 P 0 1 N N N N N N 39.841 -17.060 -8.248 -7.946 -2.917 -0.255 P1 A1JI6 11 A1JI6 O3 O2 O 0 1 N N N N N N 40.161 -17.848 -9.433 -6.847 -3.588 0.475 O3 A1JI6 12 A1JI6 O2 O3 O 0 1 N N N N N N 41.065 -16.748 -7.611 -8.150 -3.624 -1.687 O2 A1JI6 13 A1JI6 O9 O4 O 0 1 N N N N N N 38.795 -17.880 -7.532 -7.578 -1.365 -0.471 O9 A1JI6 14 A1JI6 P7 P2 P 0 1 N N N N N N 37.616 -17.392 -6.595 -6.879 -0.243 0.448 P7 A1JI6 15 A1JI6 O6 O5 O 0 1 N N N N N N 38.193 -16.369 -5.638 -7.746 -0.031 1.788 O6 A1JI6 16 A1JI6 O8 O6 O 0 1 N N N N N N 36.633 -16.799 -7.422 -5.513 -0.682 0.809 O8 A1JI6 17 A1JI6 S10 S1 S 0 1 N N N N N N 36.902 -19.095 -5.449 -6.774 1.584 -0.622 S10 A1JI6 18 A1JI6 C11 C10 C 0 1 N N N N N N 36.915 -20.394 -6.688 -5.971 2.703 0.558 C11 A1JI6 19 A1JI6 C12 C11 C 0 1 N N N N N N 35.636 -20.369 -7.469 -4.502 2.380 0.636 C12 A1JI6 20 A1JI6 C14 C12 C 0 1 N N N N N N 37.202 -20.387 -9.539 -4.062 4.637 -0.185 C14 A1JI6 21 A1JI6 C16 C13 C 0 1 N N N N N N 34.563 -21.774 -10.439 -1.611 2.493 -0.922 C16 A1JI6 22 A1JI6 C18 C14 C 0 1 N N N N N N 33.385 -23.977 -9.832 0.308 0.997 -1.120 C18 A1JI6 23 A1JI6 C19 C15 C 0 1 N N N N N N 32.818 -24.920 -8.811 1.791 0.732 -1.142 C19 A1JI6 24 A1JI6 C23 C16 C 0 1 N N N N N N 36.168 -25.633 -8.209 4.486 0.436 1.063 C23 A1JI6 25 A1JI6 C25 C17 C 0 1 N N N N N N 36.321 -26.028 -9.659 3.918 1.440 2.033 C25 A1JI6 26 A1JI6 C27 C18 C 0 1 N N N N N N 38.568 -23.314 -6.418 8.213 0.750 0.350 C27 A1JI6 27 A1JI6 C29 C19 C 0 1 N N N N N N 40.046 -22.548 -8.466 8.125 0.406 -2.066 C29 A1JI6 28 A1JI6 C30 C20 C 0 1 N N N N N N 40.902 -22.234 -6.025 10.365 0.341 -0.728 C30 A1JI6 29 A1JI6 C31 C21 C 0 1 N N N N N N 41.756 -23.413 -5.665 10.708 -1.147 -0.635 C31 A1JI6 30 A1JI6 C32 C22 C 0 1 N N N N N N 40.847 -24.481 -5.158 12.205 -1.317 -0.604 C32 A1JI6 31 A1JI6 C33 C23 C 0 1 N N N N N N 40.891 -25.821 -5.848 12.776 -1.910 0.415 C33 A1JI6 32 A1JI6 C34 C24 C 0 1 N N N N N N 39.999 -26.905 -5.347 11.966 -2.251 1.639 C34 A1JI6 33 A1JI6 C35 C25 C 0 1 N N N N N N 41.830 -26.119 -7.001 14.243 -2.251 0.363 C35 A1JI6 34 A1JI6 H2 H2 H 0 1 N N N N N N 34.797 -19.649 -10.682 -1.607 3.878 0.728 H2 A1JI6 35 A1JI6 H3 H3 H 0 1 N N N N N N 33.735 -20.136 -9.317 -1.995 2.200 1.178 H3 A1JI6 36 A1JI6 H4 H4 H 0 1 N N N N N N 34.060 -22.434 -8.334 0.543 2.944 -0.451 H4 A1JI6 37 A1JI6 H5 H5 H 0 1 N N N N N N 32.823 -25.301 -11.414 -1.202 0.157 -2.374 H5 A1JI6 38 A1JI6 H6 H6 H 0 1 N N N N N N 32.736 -23.554 -11.824 -0.110 -1.034 -1.627 H6 A1JI6 39 A1JI6 H7 H7 H 0 1 N N N N N N 34.331 -24.371 -11.708 -1.366 -0.240 -0.646 H7 A1JI6 40 A1JI6 H8 H8 H 0 1 N N N N N N 33.235 -26.920 -8.193 1.689 -0.802 0.367 H8 A1JI6 41 A1JI6 H9 H9 H 0 1 N N N N N N 34.252 -26.319 -9.546 1.990 0.834 1.000 H9 A1JI6 42 A1JI6 H10 H10 H 0 1 N N N N N N 34.607 -25.362 -6.602 4.127 -0.788 -0.571 H10 A1JI6 43 A1JI6 H12 H12 H 0 1 N N N N N N 37.196 -25.570 -6.325 6.099 -0.913 0.697 H12 A1JI6 44 A1JI6 H13 H13 H 0 1 N N N N N N 38.264 -25.753 -7.758 6.292 0.098 2.149 H13 A1JI6 45 A1JI6 H14 H14 H 0 1 N N N N N N 37.877 -23.471 -8.433 6.407 1.087 -0.736 H14 A1JI6 46 A1JI6 H15 H15 H 0 1 N N N N N N 36.583 -23.268 -7.205 6.600 2.098 0.716 H15 A1JI6 47 A1JI6 H16 H16 H 0 1 N N N N N N 39.240 -15.791 -9.682 -10.071 -2.613 0.179 H16 A1JI6 48 A1JI6 H17 H17 H 0 1 N N N N N N 41.784 -17.123 -8.105 -8.374 -4.563 -1.634 H17 A1JI6 49 A1JI6 H18 H18 H 0 1 N N N N N N 37.777 -15.528 -5.785 -8.655 0.258 1.627 H18 A1JI6 50 A1JI6 H19 H19 H 0 1 N N N N N N 37.020 -21.370 -6.192 -6.100 3.734 0.226 H19 A1JI6 51 A1JI6 H20 H20 H 0 1 N N N N N N 37.763 -20.237 -7.371 -6.424 2.579 1.542 H20 A1JI6 52 A1JI6 H21 H21 H 0 1 N N N N N N 34.662 -20.352 -7.002 -4.180 1.402 0.963 H21 A1JI6 53 A1JI6 H23 H23 H 0 1 N N N N N N 37.945 -20.376 -8.728 -4.285 5.279 0.667 H23 A1JI6 54 A1JI6 H24 H24 H 0 1 N N N N N N 37.332 -21.297 -10.143 -3.269 5.088 -0.782 H24 A1JI6 55 A1JI6 H25 H25 H 0 1 N N N N N N 37.341 -19.501 -10.176 -4.957 4.522 -0.797 H25 A1JI6 56 A1JI6 H26 H26 H 0 1 N N N N N N 33.898 -21.775 -11.315 -2.147 1.592 -1.221 H26 A1JI6 57 A1JI6 H27 H27 H 0 1 N N N N N N 35.564 -22.117 -10.739 -1.759 3.270 -1.671 H27 A1JI6 58 A1JI6 H28 H28 H 0 1 N N N N N N 32.659 -24.384 -7.864 2.325 1.668 -1.311 H28 A1JI6 59 A1JI6 H29 H29 H 0 1 N N N N N N 31.858 -25.318 -9.172 2.024 0.032 -1.944 H29 A1JI6 60 A1JI6 H31 H31 H 0 1 N N N N N N 37.382 -25.977 -9.943 3.508 0.918 2.898 H31 A1JI6 61 A1JI6 H32 H32 H 0 1 N N N N N N 35.953 -27.055 -9.800 4.708 2.117 2.359 H32 A1JI6 62 A1JI6 H33 H33 H 0 1 N N N N N N 35.739 -25.340 -10.290 3.129 2.011 1.544 H33 A1JI6 63 A1JI6 H34 H34 H 0 1 N N N N N N 38.410 -23.433 -5.356 8.722 0.694 1.301 H34 A1JI6 64 A1JI6 H35 H35 H 0 1 N N N N N N 41.022 -22.076 -8.652 7.692 1.374 -2.316 H35 A1JI6 65 A1JI6 H36 H36 H 0 1 N N N N N N 40.023 -23.541 -8.938 8.815 0.102 -2.853 H36 A1JI6 66 A1JI6 H37 H37 H 0 1 N N N N N N 39.248 -21.921 -8.891 7.330 -0.334 -1.973 H37 A1JI6 67 A1JI6 H38 H38 H 0 1 N N N N N N 41.519 -21.463 -6.510 10.797 0.757 -1.638 H38 A1JI6 68 A1JI6 H39 H39 H 0 1 N N N N N N 40.442 -21.818 -5.117 10.772 0.863 0.138 H39 A1JI6 69 A1JI6 H40 H40 H 0 1 N N N N N N 42.298 -23.770 -6.553 10.276 -1.563 0.275 H40 A1JI6 70 A1JI6 H41 H41 H 0 1 N N N N N N 42.477 -23.131 -4.884 10.301 -1.668 -1.501 H41 A1JI6 71 A1JI6 H42 H42 H 0 1 N N N N N N 40.181 -24.301 -4.327 12.807 -0.949 -1.422 H42 A1JI6 72 A1JI6 H43 H43 H 0 1 N N N N N N 39.388 -26.523 -4.516 11.473 -3.212 1.492 H43 A1JI6 73 A1JI6 H44 H44 H 0 1 N N N N N N 39.340 -27.243 -6.161 12.624 -2.309 2.506 H44 A1JI6 74 A1JI6 H45 H45 H 0 1 N N N N N N 40.610 -27.749 -4.995 11.215 -1.479 1.804 H45 A1JI6 75 A1JI6 H46 H46 H 0 1 N N N N N N 42.412 -25.217 -7.243 14.369 -3.250 -0.055 H46 A1JI6 76 A1JI6 H47 H47 H 0 1 N N N N N N 42.515 -26.931 -6.716 14.763 -1.526 -0.264 H47 A1JI6 77 A1JI6 H48 H48 H 0 1 N N N N N N 41.245 -26.425 -7.881 14.658 -2.224 1.370 H48 A1JI6 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JI6 C20 C18 SING N N 1 A1JI6 C16 C15 SING N N 2 A1JI6 C16 C17 SING N N 3 A1JI6 C15 C13 SING N N 4 A1JI6 C18 C17 DOUB N E 5 A1JI6 C18 C19 SING N N 6 A1JI6 C25 C23 SING N N 7 A1JI6 C14 C13 SING N N 8 A1JI6 O3 P1 DOUB N N 9 A1JI6 C13 C12 DOUB N E 10 A1JI6 C19 C21 SING N N 11 A1JI6 O4 P1 SING N N 12 A1JI6 C21 C22 SING N N 13 A1JI6 C29 C28 SING N N 14 A1JI6 P1 O2 SING N N 15 A1JI6 P1 O9 SING N N 16 A1JI6 C23 C22 DOUB N E 17 A1JI6 C23 C24 SING N N 18 A1JI6 O9 P7 SING N N 19 A1JI6 C12 C11 SING N N 20 A1JI6 C26 C24 SING N N 21 A1JI6 C26 C27 SING N N 22 A1JI6 O8 P7 DOUB N N 23 A1JI6 C35 C33 SING N N 24 A1JI6 C28 C27 DOUB N E 25 A1JI6 C28 C30 SING N N 26 A1JI6 C11 S10 SING N N 27 A1JI6 P7 O6 SING N N 28 A1JI6 P7 S10 SING N N 29 A1JI6 C30 C31 SING N N 30 A1JI6 C33 C34 SING N N 31 A1JI6 C33 C32 DOUB N N 32 A1JI6 C31 C32 SING N N 33 A1JI6 C15 H2 SING N N 34 A1JI6 C15 H3 SING N N 35 A1JI6 C17 H4 SING N N 36 A1JI6 C20 H5 SING N N 37 A1JI6 C20 H6 SING N N 38 A1JI6 C20 H7 SING N N 39 A1JI6 C21 H8 SING N N 40 A1JI6 C21 H9 SING N N 41 A1JI6 C22 H10 SING N N 42 A1JI6 C24 H12 SING N N 43 A1JI6 C24 H13 SING N N 44 A1JI6 C26 H14 SING N N 45 A1JI6 C26 H15 SING N N 46 A1JI6 O4 H16 SING N N 47 A1JI6 O2 H17 SING N N 48 A1JI6 O6 H18 SING N N 49 A1JI6 C11 H19 SING N N 50 A1JI6 C11 H20 SING N N 51 A1JI6 C12 H21 SING N N 52 A1JI6 C14 H23 SING N N 53 A1JI6 C14 H24 SING N N 54 A1JI6 C14 H25 SING N N 55 A1JI6 C16 H26 SING N N 56 A1JI6 C16 H27 SING N N 57 A1JI6 C19 H28 SING N N 58 A1JI6 C19 H29 SING N N 59 A1JI6 C25 H31 SING N N 60 A1JI6 C25 H32 SING N N 61 A1JI6 C25 H33 SING N N 62 A1JI6 C27 H34 SING N N 63 A1JI6 C29 H35 SING N N 64 A1JI6 C29 H36 SING N N 65 A1JI6 C29 H37 SING N N 66 A1JI6 C30 H38 SING N N 67 A1JI6 C30 H39 SING N N 68 A1JI6 C31 H40 SING N N 69 A1JI6 C31 H41 SING N N 70 A1JI6 C32 H42 SING N N 71 A1JI6 C34 H43 SING N N 72 A1JI6 C34 H44 SING N N 73 A1JI6 C34 H45 SING N N 74 A1JI6 C35 H46 SING N N 75 A1JI6 C35 H47 SING N N 76 A1JI6 C35 H48 SING N N 77 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JI6 InChI InChI 1.06 "InChI=1S/C25H44O6P2S/c1-21(2)11-7-12-22(3)13-8-14-23(4)15-9-16-24(5)17-10-18-25(6)19-20-34-33(29,30)31-32(26,27)28/h11,13,15,17,19H,7-10,12,14,16,18,20H2,1-6H3,(H,29,30)(H2,26,27,28)/b22-13+,23-15+,24-17+,25-19+" A1JI6 InChIKey InChI 1.06 GLTFGFJVZBHKFR-GIXZANJISA-N A1JI6 SMILES_CANONICAL CACTVS 3.385 "CC(C)=CCCC(/C)=C/CC\C(C)=C\CCC(/C)=C/CC\C(C)=C\CS[P](O)(=O)O[P](O)(O)=O" A1JI6 SMILES CACTVS 3.385 "CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCS[P](O)(=O)O[P](O)(O)=O" A1JI6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=CCC/C(=C/CC/C(=C/CC/C(=C/CC/C(=C/CSP(=O)(O)OP(=O)(O)O)/C)/C)/C)/C)C" A1JI6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCSP(=O)(O)OP(=O)(O)O)C)C)C)C)C" # _pdbx_chem_comp_identifier.comp_id A1JI6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{E},6~{E},10~{E},14~{E})-3,7,11,15,19-pentamethylicosa-2,6,10,14,18-pentaenyl]sulfanyl-phosphonooxy-phosphinic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JI6 "Create component" 2025-06-30 PDBE A1JI6 "Initial release" 2025-09-24 RCSB #