data_A1JIQ # _chem_comp.id A1JIQ _chem_comp.name "(2~{S})-~{N}-cyclobutyl-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]sulfanyl-~{N}-methyl-2-(1-oxidanylcyclohexyl)ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H35 F3 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-27 _chem_comp.pdbx_modified_date 2026-07-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 600.650 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JIQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RR5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JIQ N1 N1 N 0 1 N N N N N N -23.640 9.181 -2.981 5.300 0.760 -0.608 N1 A1JIQ 1 A1JIQ N3 N2 N 0 1 Y N N N N N -16.134 8.205 -1.218 -2.483 1.788 -0.331 N3 A1JIQ 2 A1JIQ C4 C1 C 0 1 N N N N N N -24.384 5.952 -3.255 7.357 3.065 -2.010 C4 A1JIQ 3 A1JIQ C5 C2 C 0 1 N N S N N N -22.429 9.824 -0.835 3.573 -0.783 0.261 C5 A1JIQ 4 A1JIQ C6 C3 C 0 1 N N N N N N -22.909 10.191 -2.249 4.162 0.073 -0.830 C6 A1JIQ 5 A1JIQ C8 C4 C 0 1 N N N N N N -25.200 7.141 -2.738 5.994 3.075 -1.298 C8 A1JIQ 6 A1JIQ C10 C5 C 0 1 N N N N N N -25.766 10.471 1.120 4.964 -4.156 -0.969 C10 A1JIQ 7 A1JIQ C13 C6 C 0 1 N N N N N N -23.193 11.839 0.574 3.700 -2.999 1.407 C13 A1JIQ 8 A1JIQ C17 C7 C 0 1 Y N N N N N -14.125 8.454 -0.524 -4.533 1.088 -0.471 C17 A1JIQ 9 A1JIQ C20 C8 C 0 1 Y N N N N N -10.563 8.975 0.477 -8.123 0.006 -0.777 C20 A1JIQ 10 A1JIQ C21 C9 C 0 1 Y N N N N N -13.028 8.645 1.686 -5.715 -1.017 0.153 C21 A1JIQ 11 A1JIQ C22 C10 C 0 1 Y N N N N N -11.892 8.809 2.457 -6.865 -1.781 0.223 C22 A1JIQ 12 A1JIQ C24 C11 C 0 1 Y N N N N N -15.441 8.526 -0.119 -3.281 0.731 -0.060 C24 A1JIQ 13 A1JIQ C26 C12 C 0 1 N N N N N N -20.153 5.534 0.038 0.927 2.697 3.133 C26 A1JIQ 14 A1JIQ C1 C13 C 0 1 N N N N N N -24.203 9.512 -4.299 5.965 0.674 0.695 C1 A1JIQ 15 A1JIQ C2 C14 C 0 1 N N N N N N -23.889 7.856 -2.371 5.877 1.587 -1.671 C2 A1JIQ 16 A1JIQ CAA C15 C 0 1 N N N N N N -23.103 6.770 -3.092 7.414 1.558 -1.710 CAA A1JIQ 17 A1JIQ CAB C16 C 0 1 N N N N N N -23.348 10.321 0.315 4.321 -2.116 0.323 CAB A1JIQ 18 A1JIQ C9 C17 C 0 1 N N N N N N -24.817 9.977 0.021 4.217 -2.822 -1.031 C9 A1JIQ 19 A1JIQ C11 C18 C 0 1 N N N N N N -25.588 11.971 1.400 4.344 -5.038 0.116 C11 A1JIQ 20 A1JIQ C12 C19 C 0 1 N N N N N N -24.123 12.325 1.695 4.447 -4.333 1.469 C12 A1JIQ 21 A1JIQ "O3'" O1 O 0 1 N N N N N N -22.963 9.633 1.537 5.695 -1.878 0.632 "O3'" A1JIQ 22 A1JIQ S1 S1 S 0 1 N N N N N N -20.777 10.404 -0.642 1.820 -1.088 -0.090 S1 A1JIQ 23 A1JIQ "C1'" C20 C 0 1 N N S N N N -19.865 9.028 -1.243 1.077 0.558 0.082 "C1'" A1JIQ 24 A1JIQ "C2'" C21 C 0 1 N N R N N N -18.359 9.284 -1.096 -0.411 0.486 -0.272 "C2'" A1JIQ 25 A1JIQ C16 C22 C 0 1 N N S N N N -17.583 8.018 -1.448 -1.044 1.865 -0.066 C16 A1JIQ 26 A1JIQ NAA N3 N 0 1 Y N N N N N -15.344 7.933 -2.228 -3.199 2.714 -0.867 NAA A1JIQ 27 A1JIQ N2 N4 N 0 1 Y N N N N N -14.101 8.086 -1.821 -4.424 2.333 -0.966 N2 A1JIQ 28 A1JIQ C18 C23 C 0 1 Y N N N N N -12.923 8.690 0.304 -5.766 0.266 -0.389 C18 A1JIQ 29 A1JIQ C19 C24 C 0 1 Y N N N N N -11.694 8.849 -0.316 -6.976 0.774 -0.855 C19 A1JIQ 30 A1JIQ F1 F1 F 0 1 N N N N N N -9.305 9.163 -0.082 -9.297 0.498 -1.229 F1 A1JIQ 31 A1JIQ F2 F2 F 0 1 N N N N N N -11.971 8.749 3.842 -6.817 -3.025 0.749 F2 A1JIQ 32 A1JIQ C23 C25 C 0 1 Y N N N N N -10.669 8.992 1.853 -8.068 -1.272 -0.242 C23 A1JIQ 33 A1JIQ F3 F3 F 0 1 N N N N N N -9.511 9.118 2.606 -9.189 -2.022 -0.172 F3 A1JIQ 34 A1JIQ "O2'" O2 O 0 1 N N N N N N -17.970 10.314 -2.008 -0.558 0.092 -1.638 "O2'" A1JIQ 35 A1JIQ "O4'" O3 O 0 1 N N N N N N -20.274 7.880 -0.478 1.222 1.007 1.431 "O4'" A1JIQ 36 A1JIQ "C4'" C26 C 0 1 N N R N N N -19.592 6.652 -0.814 0.690 2.312 1.672 "C4'" A1JIQ 37 A1JIQ OP3 O4 O 0 1 N N N N N N -21.540 5.422 -0.262 2.331 2.790 3.381 OP3 A1JIQ 38 A1JIQ "C5'" C27 C 0 1 N N R N N N -18.090 6.841 -0.600 -0.813 2.310 1.381 "C5'" A1JIQ 39 A1JIQ "O5'" O5 O 0 1 N N N N N N -17.840 7.104 0.798 -1.470 1.405 2.270 "O5'" A1JIQ 40 A1JIQ O6 O6 O 0 1 N N N N N N -23.019 11.361 -2.562 3.612 0.144 -1.909 O6 A1JIQ 41 A1JIQ H7 H1 H 0 1 N N N N N N -24.433 5.060 -2.614 7.297 3.297 -3.073 H7 A1JIQ 42 A1JIQ H8 H2 H 0 1 N N N N N N -24.609 5.670 -4.294 8.124 3.642 -1.493 H8 A1JIQ 43 A1JIQ H11 H3 H 0 1 N N N N N N -22.369 8.728 -0.769 3.668 -0.268 1.217 H11 A1JIQ 44 A1JIQ H5 H4 H 0 1 N N N N N N -25.844 6.907 -1.877 6.062 3.252 -0.225 H5 A1JIQ 45 A1JIQ H6 H5 H 0 1 N N N N N N -25.793 7.652 -3.511 5.252 3.708 -1.786 H6 A1JIQ 46 A1JIQ H14 H6 H 0 1 N N N N N N -26.803 10.289 0.802 4.891 -4.659 -1.933 H14 A1JIQ 47 A1JIQ H15 H7 H 0 1 N N N N N N -25.562 9.910 2.044 6.013 -3.974 -0.733 H15 A1JIQ 48 A1JIQ H20 H8 H 0 1 N N N N N N -23.435 12.384 -0.350 3.774 -2.496 2.372 H20 A1JIQ 49 A1JIQ H21 H9 H 0 1 N N N N N N -22.151 12.047 0.861 2.651 -3.181 1.172 H21 A1JIQ 50 A1JIQ H27 H10 H 0 1 N N N N N N -13.987 8.484 2.155 -4.780 -1.412 0.519 H27 A1JIQ 51 A1JIQ H28 H11 H 0 1 N N N N N N -15.824 8.782 0.858 -2.988 -0.206 0.391 H28 A1JIQ 52 A1JIQ H31 H12 H 0 1 N N N N N N -19.640 4.589 -0.197 0.458 3.660 3.336 H31 A1JIQ 53 A1JIQ H32 H13 H 0 1 N N N N N N -20.017 5.770 1.104 0.493 1.938 3.784 H32 A1JIQ 54 A1JIQ H1 H14 H 0 1 N N N N N N -23.908 10.534 -4.578 6.679 -0.149 0.685 H1 A1JIQ 55 A1JIQ H2 H15 H 0 1 N N N N N N -23.822 8.803 -5.049 6.490 1.608 0.897 H2 A1JIQ 56 A1JIQ H3 H16 H 0 1 N N N N N N -25.300 9.446 -4.256 5.220 0.501 1.472 H3 A1JIQ 57 A1JIQ H4 H17 H 0 1 N N N N N N -23.708 7.846 -1.286 5.410 1.416 -2.641 H4 A1JIQ 58 A1JIQ H10 H18 H 0 1 N N N N N N -22.336 6.284 -2.472 7.818 0.964 -2.530 H10 A1JIQ 59 A1JIQ H9 H19 H 0 1 N N N N N N -22.654 7.096 -4.042 7.870 1.320 -0.749 H9 A1JIQ 60 A1JIQ H12 H20 H 0 1 N N N N N N -25.105 10.446 -0.931 4.659 -2.193 -1.803 H12 A1JIQ 61 A1JIQ H13 H21 H 0 1 N N N N N N -24.914 8.885 -0.064 3.168 -3.004 -1.266 H13 A1JIQ 62 A1JIQ H16 H22 H 0 1 N N N N N N -25.922 12.540 0.520 3.295 -5.220 -0.120 H16 A1JIQ 63 A1JIQ H17 H23 H 0 1 N N N N N N -26.203 12.247 2.269 4.876 -5.989 0.160 H17 A1JIQ 64 A1JIQ H18 H24 H 0 1 N N N N N N -24.030 13.417 1.789 5.496 -4.151 1.705 H18 A1JIQ 65 A1JIQ H19 H25 H 0 1 N N N N N N -23.823 11.849 2.640 4.005 -4.962 2.242 H19 A1JIQ 66 A1JIQ H22 H26 H 0 1 N N N N N N -23.515 9.925 2.253 6.231 -2.681 0.687 H22 A1JIQ 67 A1JIQ H23 H27 H 0 1 N N N N N N -20.120 8.908 -2.306 1.577 1.255 -0.589 H23 A1JIQ 68 A1JIQ H24 H28 H 0 1 N N N N N N -18.137 9.574 -0.058 -0.905 -0.241 0.372 H24 A1JIQ 69 A1JIQ H25 H29 H 0 1 N N N N N N -17.755 7.784 -2.509 -0.586 2.582 -0.748 H25 A1JIQ 70 A1JIQ H26 H30 H 0 1 N N N N N N -11.618 8.874 -1.393 -7.019 1.768 -1.276 H26 A1JIQ 71 A1JIQ H29 H31 H 0 1 N N N N N N -17.038 10.478 -1.923 -0.174 -0.772 -1.842 H29 A1JIQ 72 A1JIQ H30 H32 H 0 1 N N N N N N -19.766 6.410 -1.873 1.186 3.032 1.021 H30 A1JIQ 73 A1JIQ H33 H33 H 0 1 N N N N N N -21.922 4.726 0.259 2.558 2.956 4.306 H33 A1JIQ 74 A1JIQ H34 H34 H 0 1 N N N N N N -17.566 5.926 -0.913 -1.212 3.315 1.523 H34 A1JIQ 75 A1JIQ H35 H35 H 0 1 N N N N N N -16.908 7.222 0.937 -1.362 1.624 3.205 H35 A1JIQ 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JIQ C1 N1 SING N N 1 A1JIQ C2 N1 SING N N 2 A1JIQ C2 C8 SING N N 3 A1JIQ C8 C4 SING N N 4 A1JIQ C4 CAA SING N N 5 A1JIQ C6 N1 SING N N 6 A1JIQ C6 C5 SING N N 7 A1JIQ C5 CAB SING N N 8 A1JIQ CAB C9 SING N N 9 A1JIQ C9 C10 SING N N 10 A1JIQ C10 C11 SING N N 11 A1JIQ C11 C12 SING N N 12 A1JIQ C12 C13 SING N N 13 A1JIQ CAB "O3'" SING N N 14 A1JIQ C5 S1 SING N N 15 A1JIQ "C1'" S1 SING N N 16 A1JIQ "C1'" "C2'" SING N N 17 A1JIQ "C2'" C16 SING N N 18 A1JIQ C16 N3 SING N N 19 A1JIQ N3 NAA SING Y N 20 A1JIQ NAA N2 DOUB Y N 21 A1JIQ C17 N2 SING Y N 22 A1JIQ C17 C18 SING N N 23 A1JIQ C18 C19 DOUB Y N 24 A1JIQ C19 C20 SING Y N 25 A1JIQ C20 F1 SING N N 26 A1JIQ C18 C21 SING Y N 27 A1JIQ C21 C22 DOUB Y N 28 A1JIQ C22 F2 SING N N 29 A1JIQ C22 C23 SING Y N 30 A1JIQ C23 F3 SING N N 31 A1JIQ C17 C24 DOUB Y N 32 A1JIQ "C2'" "O2'" SING N N 33 A1JIQ "C1'" "O4'" SING N N 34 A1JIQ "C4'" "O4'" SING N N 35 A1JIQ "C4'" C26 SING N N 36 A1JIQ C26 OP3 SING N N 37 A1JIQ "C4'" "C5'" SING N N 38 A1JIQ "C5'" "O5'" SING N N 39 A1JIQ C6 O6 DOUB N N 40 A1JIQ CAA C2 SING N N 41 A1JIQ C13 CAB SING N N 42 A1JIQ "C5'" C16 SING N N 43 A1JIQ C24 N3 SING Y N 44 A1JIQ C23 C20 DOUB Y N 45 A1JIQ C4 H7 SING N N 46 A1JIQ C4 H8 SING N N 47 A1JIQ C5 H11 SING N N 48 A1JIQ C8 H5 SING N N 49 A1JIQ C8 H6 SING N N 50 A1JIQ C10 H14 SING N N 51 A1JIQ C10 H15 SING N N 52 A1JIQ C13 H20 SING N N 53 A1JIQ C13 H21 SING N N 54 A1JIQ C21 H27 SING N N 55 A1JIQ C24 H28 SING N N 56 A1JIQ C26 H31 SING N N 57 A1JIQ C26 H32 SING N N 58 A1JIQ C1 H1 SING N N 59 A1JIQ C1 H2 SING N N 60 A1JIQ C1 H3 SING N N 61 A1JIQ C2 H4 SING N N 62 A1JIQ CAA H10 SING N N 63 A1JIQ CAA H9 SING N N 64 A1JIQ C9 H12 SING N N 65 A1JIQ C9 H13 SING N N 66 A1JIQ C11 H16 SING N N 67 A1JIQ C11 H17 SING N N 68 A1JIQ C12 H18 SING N N 69 A1JIQ C12 H19 SING N N 70 A1JIQ "O3'" H22 SING N N 71 A1JIQ "C1'" H23 SING N N 72 A1JIQ "C2'" H24 SING N N 73 A1JIQ C16 H25 SING N N 74 A1JIQ C19 H26 SING N N 75 A1JIQ "O2'" H29 SING N N 76 A1JIQ "C4'" H30 SING N N 77 A1JIQ OP3 H33 SING N N 78 A1JIQ "C5'" H34 SING N N 79 A1JIQ "O5'" H35 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JIQ InChI InChI 1.06 "InChI=1S/C27H35F3N4O6S/c1-33(15-6-5-7-15)25(38)24(27(39)8-3-2-4-9-27)41-26-23(37)21(22(36)19(13-35)40-26)34-12-18(31-32-34)14-10-16(28)20(30)17(29)11-14/h10-12,15,19,21-24,26,35-37,39H,2-9,13H2,1H3/t19-,21+,22+,23-,24-,26+/m1/s1" A1JIQ InChIKey InChI 1.06 JTDBWRSCHCFMIA-OGVHUYPWSA-N A1JIQ SMILES_CANONICAL CACTVS 3.385 "CN(C1CCC1)C(=O)[C@@H](S[C@@H]2O[C@H](CO)[C@H](O)[C@@H]([C@H]2O)n3cc(nn3)c4cc(F)c(F)c(F)c4)C5(O)CCCCC5" A1JIQ SMILES CACTVS 3.385 "CN(C1CCC1)C(=O)[CH](S[CH]2O[CH](CO)[CH](O)[CH]([CH]2O)n3cc(nn3)c4cc(F)c(F)c(F)c4)C5(O)CCCCC5" A1JIQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C1CCC1)C(=O)[C@H](C2(CCCCC2)O)S[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)O" A1JIQ SMILES "OpenEye OEToolkits" 2.0.7 "CN(C1CCC1)C(=O)C(C2(CCCCC2)O)SC3C(C(C(C(O3)CO)O)n4cc(nn4)c5cc(c(c(c5)F)F)F)O" # _pdbx_chem_comp_identifier.comp_id A1JIQ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-~{N}-cyclobutyl-2-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,5-bis(oxidanyl)-4-[4-[3,4,5-tris(fluoranyl)phenyl]-1,2,3-triazol-1-yl]oxan-2-yl]sulfanyl-~{N}-methyl-2-(1-oxidanylcyclohexyl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JIQ "Create component" 2025-06-27 PDBE A1JIQ "Initial release" 2026-07-08 RCSB #