data_A1JJA # _chem_comp.id A1JJA _chem_comp.name "8-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-2-[6-(methylamino)pyrimidin-4-yl]-2,5,8-triazaspiro[3.5]nonan-6-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H35 N7 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-06-30 _chem_comp.pdbx_modified_date 2026-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.592 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JJA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RRY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JJA C10 C1 C 0 1 Y N N N N N 47.028 -4.629 -40.249 -1.832 2.475 -1.013 C10 A1JJA 1 A1JJA C13 C2 C 0 1 Y N N N N N 45.761 -5.474 -40.223 -0.883 1.969 -0.134 C13 A1JJA 2 A1JJA C15 C3 C 0 1 N N N N N N 43.854 -6.364 -41.661 1.301 1.557 0.676 C15 A1JJA 3 A1JJA C17 C4 C 0 1 N N N N N N 44.788 -8.494 -43.318 3.739 1.008 1.247 C17 A1JJA 4 A1JJA C20 C5 C 0 1 Y N N N N N 43.005 -10.489 -43.479 4.701 -1.005 0.481 C20 A1JJA 5 A1JJA C22 C6 C 0 1 Y N N N N N 41.091 -12.096 -43.849 6.979 -1.141 0.798 C22 A1JJA 6 A1JJA C24 C7 C 0 1 Y N N N N N 43.473 -12.921 -44.184 5.933 -2.935 -0.199 C24 A1JJA 7 A1JJA C26 C8 C 0 1 N N N N N N 45.782 -13.889 -44.252 4.781 -4.843 -1.264 C26 A1JJA 8 A1JJA C01 C9 C 0 1 N N N N N N 51.591 -9.023 -34.404 -7.076 -3.740 -1.015 C01 A1JJA 9 A1JJA C02 C10 C 0 1 N N N N N N 51.194 -7.842 -35.289 -6.706 -2.510 -0.183 C02 A1JJA 10 A1JJA C03 C11 C 0 1 N N N N N N 52.410 -7.388 -36.098 -7.198 -2.698 1.253 C03 A1JJA 11 A1JJA C04 C12 C 0 1 N N N N N N 50.747 -6.784 -34.419 -7.361 -1.266 -0.791 C04 A1JJA 12 A1JJA C05 C13 C 0 1 N N N N N N 50.039 -5.661 -35.179 -6.939 -0.032 0.009 C05 A1JJA 13 A1JJA C07 C14 C 0 1 N N N N N N 48.480 -5.147 -36.547 -5.045 1.347 0.618 C07 A1JJA 14 A1JJA C08 C15 C 0 1 Y N N N N N 47.536 -5.313 -37.744 -3.577 1.566 0.353 C08 A1JJA 15 A1JJA C09 C16 C 0 1 Y N N N N N 47.905 -4.546 -39.010 -3.176 2.272 -0.767 C09 A1JJA 16 A1JJA C11 C17 C 0 1 Y N N N N N 46.257 -6.152 -37.711 -2.635 1.052 1.224 C11 A1JJA 17 A1JJA C12 C18 C 0 1 Y N N N N N 45.369 -6.239 -38.953 -1.289 1.255 0.987 C12 A1JJA 18 A1JJA C16 C19 C 0 1 N N N N N N 44.175 -7.236 -42.817 2.761 1.605 0.233 C16 A1JJA 19 A1JJA C18 C20 C 0 1 N N N N N N 42.821 -7.831 -43.023 3.185 0.418 -0.635 C18 A1JJA 20 A1JJA C27 C21 C 0 1 Y N N N N N 43.982 -11.567 -43.825 4.714 -2.270 -0.097 C27 A1JJA 21 A1JJA C29 C22 C 0 1 N N N N N N 45.583 -5.007 -42.659 0.778 3.608 -0.491 C29 A1JJA 22 A1JJA C30 C23 C 0 1 N N N N N N 44.836 -5.263 -44.014 2.255 3.828 -0.647 C30 A1JJA 23 A1JJA C32 C24 C 0 1 N N N N N N 49.441 -7.120 -36.928 -4.827 -1.064 0.598 C32 A1JJA 24 A1JJA C33 C25 C 0 1 N N N N N N 50.171 -8.262 -36.215 -5.186 -2.329 -0.184 C33 A1JJA 25 A1JJA N06 N1 N 0 1 N N N N N N 48.954 -6.131 -36.007 -5.477 0.098 -0.023 N06 A1JJA 26 A1JJA N14 N2 N 0 1 N N N N N N 44.971 -5.482 -41.443 0.476 2.176 -0.376 N14 A1JJA 27 A1JJA N19 N3 N 0 1 N N N N N N 43.470 -9.169 -43.129 3.512 -0.303 0.610 N19 A1JJA 28 A1JJA N21 N4 N 0 1 Y N N N N N 41.585 -10.753 -43.489 5.846 -0.479 0.912 N21 A1JJA 29 A1JJA N23 N5 N 0 1 Y N N N N N 42.050 -13.169 -44.193 7.034 -2.341 0.257 N23 A1JJA 30 A1JJA N25 N6 N 0 1 N N N N N N 44.368 -14.008 -44.537 5.999 -4.199 -0.766 N25 A1JJA 31 A1JJA N28 N7 N 0 1 N N N N N N 44.055 -6.500 -44.084 3.161 2.904 -0.293 N28 A1JJA 32 A1JJA O31 O1 O 0 1 N N N N N N 44.906 -4.491 -44.911 2.643 4.879 -1.110 O31 A1JJA 33 A1JJA H101 H1 H 0 0 N N N N N N 47.302 -4.091 -41.144 -1.520 3.030 -1.885 H101 A1JJA 34 A1JJA H151 H2 H 0 0 N N N N N N 43.684 -6.980 -40.765 0.995 0.521 0.821 H151 A1JJA 35 A1JJA H152 H3 H 0 0 N N N N N N 42.951 -5.775 -41.878 1.182 2.109 1.609 H152 A1JJA 36 A1JJA H171 H4 H 0 0 N N N N N N 45.130 -8.448 -44.363 4.759 1.376 1.135 H171 A1JJA 37 A1JJA H172 H5 H 0 0 N N N N N N 45.596 -8.889 -42.685 3.383 1.059 2.276 H172 A1JJA 38 A1JJA H221 H6 H 0 0 N N N N N N 40.030 -12.296 -43.861 7.891 -0.686 1.158 H221 A1JJA 39 A1JJA H261 H7 H 0 0 N N N N N N 46.302 -14.799 -44.585 5.029 -5.823 -1.672 H261 A1JJA 40 A1JJA H262 H8 H 0 0 N N N N N N 46.191 -13.018 -44.785 4.071 -4.959 -0.446 H262 A1JJA 41 A1JJA H263 H9 H 0 0 N N N N N N 45.928 -13.759 -43.170 4.338 -4.226 -2.046 H263 A1JJA 42 A1JJA H011 H10 H 0 0 N N N N N N 52.371 -8.706 -33.697 -6.604 -4.624 -0.586 H011 A1JJA 43 A1JJA H012 H11 H 0 0 N N N N N N 50.711 -9.375 -33.846 -8.158 -3.868 -1.014 H012 A1JJA 44 A1JJA H013 H12 H 0 0 N N N N N N 51.976 -9.839 -35.033 -6.727 -3.604 -2.039 H013 A1JJA 45 A1JJA H031 H13 H 0 0 N N N N N N 52.129 -6.538 -36.737 -6.729 -3.583 1.685 H031 A1JJA 46 A1JJA H032 H14 H 0 0 N N N N N N 53.213 -7.081 -35.412 -6.934 -1.822 1.845 H032 A1JJA 47 A1JJA H033 H15 H 0 0 N N N N N N 52.763 -8.219 -36.727 -8.280 -2.825 1.253 H033 A1JJA 48 A1JJA H041 H16 H 0 0 N N N N N N 50.049 -7.205 -33.681 -7.041 -1.156 -1.827 H041 A1JJA 49 A1JJA H042 H17 H 0 0 N N N N N N 51.620 -6.362 -33.899 -8.445 -1.371 -0.753 H042 A1JJA 50 A1JJA H051 H18 H 0 0 N N N N N N 49.636 -4.944 -34.448 -7.392 0.857 -0.429 H051 A1JJA 51 A1JJA H052 H19 H 0 0 N N N N N N 50.775 -5.155 -35.821 -7.272 -0.137 1.042 H052 A1JJA 52 A1JJA H071 H20 H 0 0 N N N N N N 47.921 -4.598 -35.775 -5.214 1.282 1.692 H071 A1JJA 53 A1JJA H072 H21 H 0 0 N N N N N N 49.326 -4.535 -36.892 -5.616 2.181 0.210 H072 A1JJA 54 A1JJA H091 H22 H 0 0 N N N N N N 48.798 -3.938 -39.026 -3.915 2.665 -1.450 H091 A1JJA 55 A1JJA H111 H23 H 0 0 N N N N N N 45.982 -6.682 -36.811 -2.951 0.494 2.093 H111 A1JJA 56 A1JJA H121 H24 H 0 0 N N N N N N 44.470 -6.837 -38.936 -0.554 0.853 1.668 H121 A1JJA 57 A1JJA H181 H25 H 0 0 N N N N N N 42.141 -7.722 -42.166 2.362 -0.029 -1.193 H181 A1JJA 58 A1JJA H182 H26 H 0 0 N N N N N N 42.312 -7.498 -43.940 4.055 0.625 -1.259 H182 A1JJA 59 A1JJA H271 H27 H 0 0 N N N N N N 45.043 -11.367 -43.815 3.803 -2.725 -0.457 H271 A1JJA 60 A1JJA H291 H28 H 0 0 N N N N N N 45.710 -3.919 -42.557 0.431 4.121 0.407 H291 A1JJA 61 A1JJA H292 H29 H 0 0 N N N N N N 46.570 -5.486 -42.736 0.260 4.015 -1.359 H292 A1JJA 62 A1JJA H321 H30 H 0 0 N N N N N N 48.588 -7.537 -37.484 -5.170 -1.164 1.628 H321 A1JJA 63 A1JJA H322 H31 H 0 0 N N N N N N 50.137 -6.638 -37.630 -3.746 -0.924 0.587 H322 A1JJA 64 A1JJA H331 H32 H 0 0 N N N N N N 50.642 -8.897 -36.980 -4.716 -3.193 0.286 H331 A1JJA 65 A1JJA H332 H33 H 0 0 N N N N N N 49.426 -8.849 -35.658 -4.831 -2.235 -1.211 H332 A1JJA 66 A1JJA H251 H35 H 0 0 N N N N N N 44.042 -14.821 -44.055 6.852 -4.656 -0.833 H251 A1JJA 67 A1JJA H281 H36 H 0 0 N N N N N N 43.521 -6.799 -44.875 4.105 3.105 -0.389 H281 A1JJA 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JJA C01 C02 SING N N 1 A1JJA C02 C33 SING N N 2 A1JJA C02 C03 SING N N 3 A1JJA C02 C04 SING N N 4 A1JJA C04 C05 SING N N 5 A1JJA C05 N06 SING N N 6 A1JJA N06 C07 SING N N 7 A1JJA N06 C32 SING N N 8 A1JJA C07 C08 SING N N 9 A1JJA C08 C09 DOUB Y N 10 A1JJA C08 C11 SING Y N 11 A1JJA C09 C10 SING Y N 12 A1JJA C10 C13 DOUB Y N 13 A1JJA C11 C12 DOUB Y N 14 A1JJA C12 C13 SING Y N 15 A1JJA C13 N14 SING N N 16 A1JJA N14 C15 SING N N 17 A1JJA N14 C29 SING N N 18 A1JJA C15 C16 SING N N 19 A1JJA C16 C17 SING N N 20 A1JJA C16 C18 SING N N 21 A1JJA C16 N28 SING N N 22 A1JJA C17 N19 SING N N 23 A1JJA C18 N19 SING N N 24 A1JJA N19 C20 SING N N 25 A1JJA C20 C27 DOUB Y N 26 A1JJA C20 N21 SING Y N 27 A1JJA N21 C22 DOUB Y N 28 A1JJA C22 N23 SING Y N 29 A1JJA N23 C24 DOUB Y N 30 A1JJA C24 N25 SING N N 31 A1JJA C24 C27 SING Y N 32 A1JJA N25 C26 SING N N 33 A1JJA N28 C30 SING N N 34 A1JJA C29 C30 SING N N 35 A1JJA C30 O31 DOUB N N 36 A1JJA C32 C33 SING N N 37 A1JJA C10 H101 SING N N 38 A1JJA C15 H151 SING N N 39 A1JJA C15 H152 SING N N 40 A1JJA C17 H171 SING N N 41 A1JJA C17 H172 SING N N 42 A1JJA C22 H221 SING N N 43 A1JJA C26 H261 SING N N 44 A1JJA C26 H262 SING N N 45 A1JJA C26 H263 SING N N 46 A1JJA C01 H011 SING N N 47 A1JJA C01 H012 SING N N 48 A1JJA C01 H013 SING N N 49 A1JJA C03 H031 SING N N 50 A1JJA C03 H032 SING N N 51 A1JJA C03 H033 SING N N 52 A1JJA C04 H041 SING N N 53 A1JJA C04 H042 SING N N 54 A1JJA C05 H051 SING N N 55 A1JJA C05 H052 SING N N 56 A1JJA C07 H071 SING N N 57 A1JJA C07 H072 SING N N 58 A1JJA C09 H091 SING N N 59 A1JJA C11 H111 SING N N 60 A1JJA C12 H121 SING N N 61 A1JJA C18 H181 SING N N 62 A1JJA C18 H182 SING N N 63 A1JJA C27 H271 SING N N 64 A1JJA C29 H291 SING N N 65 A1JJA C29 H292 SING N N 66 A1JJA C32 H321 SING N N 67 A1JJA C32 H322 SING N N 68 A1JJA C33 H331 SING N N 69 A1JJA C33 H332 SING N N 70 A1JJA N25 H251 SING N N 71 A1JJA N28 H281 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JJA InChI InChI 1.06 "InChI=1S/C25H35N7O/c1-24(2)8-10-30(11-9-24)13-19-4-6-20(7-5-19)31-14-23(33)29-25(15-31)16-32(17-25)22-12-21(26-3)27-18-28-22/h4-7,12,18H,8-11,13-17H2,1-3H3,(H,29,33)(H,26,27,28)" A1JJA InChIKey InChI 1.06 UJYDWVTUEGVWPA-UHFFFAOYSA-N A1JJA SMILES_CANONICAL CACTVS 3.385 "CNc1cc(ncn1)N2CC3(CN(CC(=O)N3)c4ccc(CN5CCC(C)(C)CC5)cc4)C2" A1JJA SMILES CACTVS 3.385 "CNc1cc(ncn1)N2CC3(CN(CC(=O)N3)c4ccc(CN5CCC(C)(C)CC5)cc4)C2" A1JJA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(CCN(CC1)Cc2ccc(cc2)N3CC(=O)NC4(C3)CN(C4)c5cc(ncn5)NC)C" A1JJA SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CCN(CC1)Cc2ccc(cc2)N3CC(=O)NC4(C3)CN(C4)c5cc(ncn5)NC)C" # _pdbx_chem_comp_identifier.comp_id A1JJA _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-[4-[(4,4-dimethylpiperidin-1-yl)methyl]phenyl]-2-[6-(methylamino)pyrimidin-4-yl]-2,5,8-triazaspiro[3.5]nonan-6-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JJA "Create component" 2025-06-30 PDBE A1JJA "Initial release" 2026-03-18 RCSB #