data_A1JJE # _chem_comp.id A1JJE _chem_comp.name "Aspartyl-S-lipoyllysine-amide dipeptide, reduced" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H34 N4 O5 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-02 _chem_comp.pdbx_modified_date 2026-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 450.616 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JJE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9QL2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JJE CE C1 C 0 1 N N N N N N -13.372 -14.563 -55.597 0.625 0.990 -0.380 CE A1JJE 1 A1JJE C1 C2 C 0 1 N N S N N N -7.196 -15.901 -57.694 -8.050 0.213 0.116 C1 A1JJE 2 A1JJE CD C3 C 0 1 N N N N N N -14.117 -15.247 -54.458 1.704 1.905 0.203 CD A1JJE 3 A1JJE C2 C4 C 0 1 N N N N N N -8.394 -16.822 -57.875 -9.140 -0.621 -0.562 C2 A1JJE 4 A1JJE C3 C5 C 0 1 N N N N N N -8.645 -17.258 -59.307 -10.516 -0.102 -0.139 C3 A1JJE 5 A1JJE C4 C6 C 0 1 N N N N N N -7.395 -14.466 -58.147 -6.679 -0.223 -0.403 C4 A1JJE 6 A1JJE C5 C7 C 0 1 N N N N N N -8.045 -13.483 -57.177 -5.599 0.692 0.180 C5 A1JJE 7 A1JJE C6 C8 C 0 1 N N N N N N -8.616 -14.061 -55.890 -4.227 0.256 -0.338 C6 A1JJE 8 A1JJE C7 C9 C 0 1 N N N N N N -9.788 -13.262 -55.343 -3.148 1.171 0.244 C7 A1JJE 9 A1JJE C8 C10 C 0 1 N N N N N N -11.097 -13.613 -56.009 -1.796 0.741 -0.266 C8 A1JJE 10 A1JJE NZ N1 N 0 1 N N N N N N -12.036 -14.131 -55.208 -0.689 1.407 0.116 NZ A1JJE 11 A1JJE O19 O1 O 0 1 N N N N N N -11.283 -13.441 -57.221 -1.706 -0.203 -1.022 O19 A1JJE 12 A1JJE S20 S1 S 0 1 N N N N N N -10.016 -18.428 -59.490 -11.808 -1.090 -0.943 S20 A1JJE 13 A1JJE S21 S2 S 0 1 N N N N N N -5.738 -16.569 -58.537 -8.126 -0.038 1.911 S21 A1JJE 14 A1JJE HE2 H1 H 0 1 N N N N N N -13.948 -13.683 -55.917 0.640 1.056 -1.468 HE2 A1JJE 15 A1JJE HE3 H2 H 0 1 N N N N N N -13.284 -15.269 -56.436 0.818 -0.039 -0.076 HE3 A1JJE 16 A1JJE H22 H4 H 0 1 N N N N N N -6.931 -15.890 -56.626 -8.206 1.267 -0.111 H1 A1JJE 17 A1JJE HD3 H5 H 0 1 N N N N N N -15.188 -15.036 -54.592 1.689 1.838 1.291 HD3 A1JJE 18 A1JJE H20 H7 H 0 1 N N N N N N -9.290 -16.295 -57.515 -9.038 -0.540 -1.645 H2 A1JJE 19 A1JJE H21 H8 H 0 1 N N N N N N -8.229 -17.723 -57.266 -9.037 -1.664 -0.264 H21 A1JJE 20 A1JJE H31 H9 H 0 1 N N N N N N -7.730 -17.734 -59.689 -10.617 -0.183 0.943 H31 A1JJE 21 A1JJE H3 H10 H 0 1 N N N N N N -8.871 -16.364 -59.907 -10.618 0.941 -0.437 H3 A1JJE 22 A1JJE H4 H11 H 0 1 N N N N N N -6.403 -14.064 -58.401 -6.485 -1.252 -0.099 H4 A1JJE 23 A1JJE H41 H12 H 0 1 N N N N N N -8.022 -14.494 -59.051 -6.663 -0.156 -1.490 H41 A1JJE 24 A1JJE H5 H13 H 0 1 N N N N N N -7.284 -12.739 -56.898 -5.792 1.720 -0.124 H5 A1JJE 25 A1JJE H51 H14 H 0 1 N N N N N N -8.867 -12.984 -57.711 -5.615 0.625 1.268 H51 A1JJE 26 A1JJE H61 H15 H 0 1 N N N N N N -8.955 -15.088 -56.089 -4.034 -0.773 -0.035 H61 A1JJE 27 A1JJE H6 H16 H 0 1 N N N N N N -7.820 -14.078 -55.131 -4.212 0.322 -1.426 H6 A1JJE 28 A1JJE H71 H17 H 0 1 N N N N N N -9.589 -12.192 -55.502 -3.341 2.199 -0.060 H71 A1JJE 29 A1JJE H7 H18 H 0 1 N N N N N N -9.877 -13.462 -54.265 -3.163 1.104 1.332 H7 A1JJE 30 A1JJE HZ1 H19 H 0 1 N N N N N N -11.796 -14.232 -54.243 -0.762 2.162 0.720 HZ1 A1JJE 31 A1JJE H9 H20 H 0 1 N N N N N N -10.023 -18.637 -60.773 -12.943 -0.532 -0.487 H9 A1JJE 32 A1JJE H8 H21 H 0 1 N N N N N N -5.685 -17.780 -58.066 -7.921 -1.361 2.040 H8 A1JJE 33 A1JJE C9 C9 C 0 1 N N N N N N ? ? ? 3.076 1.469 -0.315 C9 A1JJE 34 A1JJE C10 C10 C 0 1 N N N N N N ? ? ? 4.155 2.384 0.267 C10 A1JJE 35 A1JJE C11 C11 C 0 1 N N N N N N ? ? ? 5.527 1.948 -0.251 C11 A1JJE 36 A1JJE C12 C12 C 0 1 N N N N N N ? ? ? 6.576 2.921 0.223 C12 A1JJE 37 A1JJE N1 N1 N 0 1 N N N N N N ? ? ? 5.839 0.609 0.256 N1 A1JJE 38 A1JJE N2 N2 N 0 1 N N N N N N ? ? ? 6.495 4.221 -0.124 N2 A1JJE 39 A1JJE O1 O1 O 0 1 N N N N N N ? ? ? 7.493 2.535 0.916 O1 A1JJE 40 A1JJE C C C 0 1 N N N N N N ? ? ? 6.695 -0.185 -0.417 C A1JJE 41 A1JJE CA CA C 0 1 N N N N N N ? ? ? 7.015 -1.561 0.105 CA A1JJE 42 A1JJE O O O 0 1 N N N N N N ? ? ? 7.208 0.209 -1.443 O A1JJE 43 A1JJE CB CB C 0 1 N N N N N N ? ? ? 5.887 -2.524 -0.270 CB A1JJE 44 A1JJE CG CG C 0 1 N N N N N N ? ? ? 6.146 -3.871 0.355 CG A1JJE 45 A1JJE OD2 OD2 O 0 1 N N N N N N ? ? ? 5.282 -4.879 0.161 OD2 A1JJE 46 A1JJE OD1 OD1 O 0 1 N N N N N N ? ? ? 7.132 -4.042 1.032 OD1 A1JJE 47 A1JJE N N N 0 1 N N N N N N ? ? ? 8.275 -2.029 -0.487 N A1JJE 48 A1JJE H1 H10 H 0 1 N N N N N N -13.942 -16.329 -54.553 1.511 2.933 -0.101 H10 A1JJE 49 A1JJE H11 H11 H 0 1 N N N N N N ? ? ? 3.269 0.440 -0.012 H11 A1JJE 50 A1JJE H12 H12 H 0 1 N N N N N N ? ? ? 3.962 3.412 -0.037 H12 A1JJE 51 A1JJE H13 H13 H 0 1 N N N N N N ? ? ? 4.140 2.317 1.355 H13 A1JJE 52 A1JJE H14 H14 H 0 1 N N N N N N ? ? ? 5.515 1.929 -1.341 H14 A1JJE 53 A1JJE H17 H17 H 0 1 N N N N N N ? ? ? 5.761 4.530 -0.679 H17 A1JJE 54 A1JJE H91 H25 H 0 1 N N N N N N ? ? ? 3.092 1.536 -1.403 H25 A1JJE 55 A1JJE H15 H15 H 0 1 N N N N N N ? ? ? 5.428 0.294 1.077 H15 A1JJE 56 A1JJE H16 H16 H 0 1 N N N N N N ? ? ? 7.169 4.847 0.181 H16 A1JJE 57 A1JJE HA H18 H 0 1 N N N N N N ? ? ? 7.115 -1.525 1.190 H18 A1JJE 58 A1JJE HB2 H19 H 0 1 N N N N N N ? ? ? 4.937 -2.132 0.093 H19 A1JJE 59 A1JJE HB3 H20 H 0 1 N N N N N N ? ? ? 5.845 -2.630 -1.355 H20 A1JJE 60 A1JJE HD2 H22 H 0 1 N N N N N N ? ? ? 5.491 -5.724 0.582 H22 A1JJE 61 A1JJE H2 H23 H 0 1 N N N N N N ? ? ? 8.545 -2.923 -0.104 H23 A1JJE 62 A1JJE H H24 H 0 1 N N N N N N ? ? ? 8.208 -2.072 -1.493 H24 A1JJE 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JJE S20 C3 SING N N 1 A1JJE C3 C2 SING N N 2 A1JJE S21 C1 SING N N 3 A1JJE C4 C1 SING N N 4 A1JJE C4 C5 SING N N 5 A1JJE C2 C1 SING N N 6 A1JJE O19 C8 DOUB N N 7 A1JJE C5 C6 SING N N 8 A1JJE C8 C7 SING N N 9 A1JJE C8 NZ SING N N 10 A1JJE C6 C7 SING N N 11 A1JJE CE NZ SING N N 12 A1JJE CE CD SING N N 13 A1JJE CE HE2 SING N N 14 A1JJE CE HE3 SING N N 15 A1JJE C1 H22 SING N N 16 A1JJE CD HD3 SING N N 17 A1JJE C2 H20 SING N N 18 A1JJE C2 H21 SING N N 19 A1JJE C3 H31 SING N N 20 A1JJE C3 H3 SING N N 21 A1JJE C4 H4 SING N N 22 A1JJE C4 H41 SING N N 23 A1JJE C5 H5 SING N N 24 A1JJE C5 H51 SING N N 25 A1JJE C6 H61 SING N N 26 A1JJE C6 H6 SING N N 27 A1JJE C7 H71 SING N N 28 A1JJE C7 H7 SING N N 29 A1JJE NZ HZ1 SING N N 30 A1JJE S20 H9 SING N N 31 A1JJE S21 H8 SING N N 32 A1JJE CD C9 SING N N 33 A1JJE C9 C10 SING N N 34 A1JJE C10 C11 SING N N 35 A1JJE C11 C12 SING N N 36 A1JJE C11 N1 SING N N 37 A1JJE C12 N2 SING N N 38 A1JJE C12 O1 DOUB N N 39 A1JJE N1 C SING N N 40 A1JJE C CA SING N N 41 A1JJE C O DOUB N N 42 A1JJE CA CB SING N N 43 A1JJE CB CG SING N N 44 A1JJE CG OD2 SING N N 45 A1JJE CG OD1 DOUB N N 46 A1JJE CA N SING N N 47 A1JJE CD H1 SING N N 48 A1JJE C9 H11 SING N N 49 A1JJE C10 H12 SING N N 50 A1JJE C10 H13 SING N N 51 A1JJE C11 H14 SING N N 52 A1JJE N2 H17 SING N N 53 A1JJE C9 H91 SING N N 54 A1JJE N1 H15 SING N N 55 A1JJE N2 H16 SING N N 56 A1JJE CA HA SING N N 57 A1JJE CB HB2 SING N N 58 A1JJE CB HB3 SING N N 59 A1JJE OD2 HD2 SING N N 60 A1JJE N H2 SING N N 61 A1JJE N H SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JJE InChI InChI 1.06 "InChI=1S/C18H34N4O5S2/c19-13(11-16(24)25)18(27)22-14(17(20)26)6-3-4-9-21-15(23)7-2-1-5-12(29)8-10-28/h12-14,28-29H,1-11,19H2,(H2,20,26)(H,21,23)(H,22,27)(H,24,25)/t12-,13?,14?/m0/s1" A1JJE InChIKey InChI 1.06 SHIRUYFMGIGUGW-HSBZDZAISA-N A1JJE SMILES_CANONICAL CACTVS 3.385 "NC(CC(O)=O)C(=O)NC(CCCCNC(=O)CCCC[C@H](S)CCS)C(N)=O" A1JJE SMILES CACTVS 3.385 "NC(CC(O)=O)C(=O)NC(CCCCNC(=O)CCCC[CH](S)CCS)C(N)=O" A1JJE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(CCC(=O)NCCCCC(C(=O)N)NC(=O)C(CC(=O)O)N)C[C@@H](CCS)S" A1JJE SMILES "OpenEye OEToolkits" 2.0.7 "C(CCC(=O)NCCCCC(C(=O)N)NC(=O)C(CC(=O)O)N)CC(CCS)S" # _pdbx_chem_comp_identifier.comp_id A1JJE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-azanyl-4-[[1-azanyl-6-[[(6~{S})-6,8-bis(sulfanyl)octanoyl]amino]-1-oxidanylidene-hexan-2-yl]amino]-4-oxidanylidene-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JJE "Create component" 2025-07-02 PDBE A1JJE "Initial release" 2026-09-30 RCSB #