data_A1JJN # _chem_comp.id A1JJN _chem_comp.name "(2R,4S,5R,6R)-5-acetamido-2-[[2,3-bis(chloranyl)phenyl]methoxy]-6-[(1R,2R)-1,2-bis(oxidanyl)-3-[(4-phenylphenyl)carbonylamino]propyl]-4-oxidanyl-oxane-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H32 Cl2 N2 O9" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-07 _chem_comp.pdbx_modified_date 2025-12-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 647.500 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JJN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ROB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JJN C11 C1 C 0 1 N N S N N N -16.130 7.308 -49.019 4.840 -2.163 0.796 C11 A1JJN 1 A1JJN C7 C2 C 0 1 N N R N N N -15.414 6.143 -48.342 3.720 -2.653 -0.128 C7 A1JJN 2 A1JJN C9 C3 C 0 1 N N R N N N -16.374 4.488 -44.923 -0.083 -2.066 -0.024 C9 A1JJN 3 A1JJN C22 C4 C 0 1 N N N N N N -15.814 3.360 -44.061 -1.202 -2.500 -0.973 C22 A1JJN 4 A1JJN C8 C5 C 0 1 N N N N N N -17.889 2.372 -43.237 -3.588 -2.102 -1.265 C8 A1JJN 5 A1JJN C30 C6 C 0 1 Y N N N N N -18.888 2.334 -42.126 -4.855 -1.461 -0.857 C30 A1JJN 6 A1JJN C31 C7 C 0 1 Y N N N N N -20.109 1.692 -42.299 -4.882 -0.603 0.246 C31 A1JJN 7 A1JJN C12 C8 C 0 1 Y N N N N N -21.056 1.696 -41.291 -6.063 -0.006 0.624 C12 A1JJN 8 A1JJN C13 C9 C 0 1 Y N N N N N -20.817 2.334 -40.077 -7.233 -0.257 -0.094 C13 A1JJN 9 A1JJN C14 C10 C 0 1 Y N N N N N -21.844 2.354 -39.004 -8.504 0.387 0.315 C14 A1JJN 10 A1JJN C15 C11 C 0 1 Y N N N N N -22.858 1.399 -38.965 -9.675 0.139 -0.400 C15 A1JJN 11 A1JJN C16 C12 C 0 1 Y N N N N N -23.818 1.425 -37.966 -10.856 0.742 -0.015 C16 A1JJN 12 A1JJN C20 C13 C 0 1 Y N N N N N -19.586 2.964 -39.908 -7.207 -1.112 -1.195 C20 A1JJN 13 A1JJN C21 C14 C 0 1 Y N N N N N -18.637 2.965 -40.913 -6.026 -1.707 -1.578 C21 A1JJN 14 A1JJN C24 C15 C 0 1 Y N N N N N -21.259 4.428 -47.948 3.061 3.289 0.422 C24 A1JJN 15 A1JJN C27 C16 C 0 1 Y N N N N N -23.417 3.092 -49.123 2.595 5.996 0.751 C27 A1JJN 16 A1JJN C1 C17 C 0 1 N N N N N N -18.464 7.635 -47.001 3.159 -0.848 2.817 C1 A1JJN 17 A1JJN C10 C18 C 0 1 N N N N N N -17.589 6.946 -49.294 4.750 -0.639 0.925 C10 A1JJN 18 A1JJN O2 O1 O 0 1 N N N N N N -15.594 3.511 -46.979 1.521 -2.134 -1.830 O2 A1JJN 19 A1JJN C32 C19 C 0 1 N N R N N N -16.134 5.855 -47.027 2.371 -2.196 0.432 C32 A1JJN 20 A1JJN C5 C20 C 0 1 N N R N N N -15.565 4.703 -46.203 1.252 -2.629 -0.517 C5 A1JJN 21 A1JJN C17 C21 C 0 1 Y N N N N N -23.781 2.398 -36.992 -10.879 1.590 1.077 C17 A1JJN 22 A1JJN C23 C22 C 0 1 N N N N N N -20.095 5.152 -47.330 3.316 1.814 0.244 C23 A1JJN 23 A1JJN C25 C23 C 0 1 Y N N N N N -21.558 4.604 -49.296 2.820 3.802 1.684 C25 A1JJN 24 A1JJN C28 C24 C 0 1 Y N N N N N -23.126 2.909 -47.783 2.841 5.486 -0.511 C28 A1JJN 25 A1JJN C29 C25 C 0 1 Y N N N N N -22.055 3.572 -47.195 3.075 4.130 -0.675 C29 A1JJN 26 A1JJN C18 C26 C 0 1 Y N N N N N -22.784 3.349 -37.013 -9.720 1.840 1.790 C18 A1JJN 27 A1JJN C19 C27 C 0 1 Y N N N N N -21.822 3.331 -38.010 -8.535 1.239 1.418 C19 A1JJN 28 A1JJN C2 C28 C 0 1 N N R N N N -18.264 6.487 -48.012 3.360 -0.260 1.444 C2 A1JJN 29 A1JJN C26 C29 C 0 1 Y N N N N N -22.627 3.942 -49.879 2.587 5.154 1.848 C26 A1JJN 30 A1JJN C6 C30 C 0 1 N N N N N N -13.004 5.659 -48.379 4.567 -4.730 -1.079 C6 A1JJN 31 A1JJN C3 C31 C 0 1 N N N N N N -11.630 6.206 -48.127 4.598 -6.235 -1.153 C3 A1JJN 32 A1JJN N5 N1 N 0 1 N N N N N N -14.020 6.484 -48.108 3.750 -4.116 -0.201 N5 A1JJN 33 A1JJN N1 N2 N 0 1 N N N N N N -16.744 3.016 -42.998 -2.458 -1.864 -0.569 N1 A1JJN 34 A1JJN O1A O2 O 0 1 N N N N N N -15.464 7.646 -50.236 6.107 -2.524 0.244 O1A A1JJN 35 A1JJN O10 O3 O 0 1 N N N N N N -13.184 4.524 -48.809 5.278 -4.072 -1.809 O10 A1JJN 36 A1JJN O1 O4 O 0 1 N N N N N N -16.397 5.702 -44.171 -0.352 -2.562 1.289 O1 A1JJN 37 A1JJN O5 O5 O 0 1 N N N N N N -18.133 1.850 -44.321 -3.564 -2.844 -2.227 O5 A1JJN 38 A1JJN O6 O6 O 0 1 N N N N N N -17.485 5.501 -47.360 2.365 -0.772 0.556 O6 A1JJN 39 A1JJN O3 O7 O 0 1 N N N N N N -19.522 5.965 -48.364 3.250 1.163 1.515 O3 A1JJN 40 A1JJN O4 O8 O 0 1 N N N N N N -18.549 8.789 -47.453 2.869 -0.131 3.745 O4 A1JJN 41 A1JJN O7 O9 O 0 1 N N N N N N -18.532 7.298 -45.802 3.301 -2.169 3.009 O7 A1JJN 42 A1JJN CL1 CL1 CL 0 0 N N N N N N -24.116 1.836 -46.849 2.858 6.543 -1.887 CL1 A1JJN 43 A1JJN CL2 CL2 CL 0 0 N N N N N N -21.699 3.338 -45.526 3.384 3.488 -2.258 CL2 A1JJN 44 A1JJN H91 H1 H 0 1 N N N N N N -16.111 8.170 -48.336 4.727 -2.620 1.779 H91 A1JJN 45 A1JJN H92 H2 H 0 1 N N N N N N -15.481 5.256 -48.989 3.862 -2.236 -1.125 H92 A1JJN 46 A1JJN H8 H3 H 0 1 N N N N N N -17.401 4.219 -45.211 -0.030 -0.978 0.003 H8 A1JJN 47 A1JJN H1 H4 H 0 1 N N N N N N -15.642 2.475 -44.691 -0.953 -2.198 -1.990 H1 A1JJN 48 A1JJN H2 H5 H 0 1 N N N N N N -14.861 3.684 -43.617 -1.313 -3.583 -0.932 H2 A1JJN 49 A1JJN H3 H6 H 0 1 N N N N N N -20.320 1.185 -43.229 -3.976 -0.410 0.801 H3 A1JJN 50 A1JJN H4 H7 H 0 1 N N N N N N -21.999 1.194 -41.449 -6.084 0.656 1.477 H4 A1JJN 51 A1JJN H5 H8 H 0 1 N N N N N N -22.896 0.630 -39.722 -9.658 -0.522 -1.253 H5 A1JJN 52 A1JJN H9 H9 H 0 1 N N N N N N -24.599 0.679 -37.951 -11.764 0.550 -0.568 H9 A1JJN 53 A1JJN H10 H10 H 0 1 N N N N N N -19.369 3.461 -38.974 -8.113 -1.305 -1.750 H10 A1JJN 54 A1JJN H11 H11 H 0 1 N N N N N N -17.691 3.461 -40.754 -6.005 -2.366 -2.433 H11 A1JJN 55 A1JJN H12 H12 H 0 1 N N N N N N -24.252 2.577 -49.575 2.413 7.053 0.880 H12 A1JJN 56 A1JJN HO8 H13 H 0 1 N N N N N N -18.115 7.829 -49.686 5.508 -0.288 1.625 HO8 A1JJN 57 A1JJN HO1B H14 H 0 0 N N N N N N -17.629 6.135 -50.037 4.912 -0.181 -0.050 HO1B A1JJN 58 A1JJN HO7 H15 H 0 1 N N N N N N -15.240 2.792 -46.469 1.582 -1.170 -1.882 HO7 A1JJN 59 A1JJN H6 H16 H 0 1 N N N N N N -16.125 6.767 -46.412 2.212 -2.647 1.411 H6 A1JJN 60 A1JJN H7 H17 H 0 1 N N N N N N -14.529 4.947 -45.926 1.199 -3.718 -0.544 H7 A1JJN 61 A1JJN H18 H18 H 0 1 N N N N N N -24.531 2.416 -36.215 -11.805 2.059 1.375 H18 A1JJN 62 A1JJN H19 H19 H 0 1 N N N N N N -19.352 4.430 -46.960 2.561 1.393 -0.420 H19 A1JJN 63 A1JJN H20 H20 H 0 1 N N N N N N -20.439 5.783 -46.498 4.305 1.666 -0.189 H20 A1JJN 64 A1JJN H21 H21 H 0 1 N N N N N N -20.949 5.265 -49.895 2.814 3.145 2.541 H21 A1JJN 65 A1JJN H22 H22 H 0 1 N N N N N N -22.752 4.112 -36.249 -9.743 2.504 2.642 H22 A1JJN 66 A1JJN H23 H23 H 0 1 N N N N N N -21.046 4.082 -38.017 -7.632 1.431 1.979 H23 A1JJN 67 A1JJN H24 H24 H 0 1 N N N N N N -22.845 4.089 -50.926 2.399 5.554 2.833 H24 A1JJN 68 A1JJN H111 H25 H 0 0 N N N N N N -10.879 5.445 -48.385 3.898 -6.649 -0.427 H111 A1JJN 69 A1JJN H112 H26 H 0 0 N N N N N N -11.473 7.101 -48.747 4.313 -6.555 -2.156 H112 A1JJN 70 A1JJN H113 H27 H 0 0 N N N N N N -11.531 6.473 -47.065 5.604 -6.589 -0.931 H113 A1JJN 71 A1JJN HN5 H28 H 0 1 N N N N N N -13.810 7.383 -47.724 3.182 -4.642 0.384 HN5 A1JJN 72 A1JJN HO9 H29 H 0 1 N N N N N N -16.519 3.270 -42.057 -2.477 -1.272 0.199 HO9 A1JJN 73 A1JJN HO4 H30 H 0 1 N N N N N N -14.559 7.869 -50.051 6.863 -2.244 0.779 HO4 A1JJN 74 A1JJN H13 H31 H 0 1 N N N N N N -16.899 5.572 -43.375 -0.413 -3.526 1.341 H13 A1JJN 75 A1JJN H14 H32 H 0 1 N N N N N N -18.662 8.069 -45.263 3.161 -2.500 3.907 H14 A1JJN 76 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JJN O1A C11 SING N N 1 A1JJN C26 C25 DOUB Y N 2 A1JJN C26 C27 SING Y N 3 A1JJN C25 C24 SING Y N 4 A1JJN C10 C11 SING N N 5 A1JJN C10 C2 SING N N 6 A1JJN C27 C28 DOUB Y N 7 A1JJN C11 C7 SING N N 8 A1JJN O10 C6 DOUB N N 9 A1JJN C6 C3 SING N N 10 A1JJN C6 N5 SING N N 11 A1JJN O3 C2 SING N N 12 A1JJN O3 C23 SING N N 13 A1JJN C7 N5 SING N N 14 A1JJN C7 C32 SING N N 15 A1JJN C2 O6 SING N N 16 A1JJN C2 C1 SING N N 17 A1JJN C24 C23 SING N N 18 A1JJN C24 C29 DOUB Y N 19 A1JJN C28 C29 SING Y N 20 A1JJN C28 CL1 SING N N 21 A1JJN O4 C1 DOUB N N 22 A1JJN O6 C32 SING N N 23 A1JJN C29 CL2 SING N N 24 A1JJN C32 C5 SING N N 25 A1JJN C1 O7 SING N N 26 A1JJN O2 C5 SING N N 27 A1JJN C5 C9 SING N N 28 A1JJN C9 O1 SING N N 29 A1JJN C9 C22 SING N N 30 A1JJN O5 C8 DOUB N N 31 A1JJN C22 N1 SING N N 32 A1JJN C8 N1 SING N N 33 A1JJN C8 C30 SING N N 34 A1JJN C31 C30 DOUB Y N 35 A1JJN C31 C12 SING Y N 36 A1JJN C30 C21 SING Y N 37 A1JJN C12 C13 DOUB Y N 38 A1JJN C21 C20 DOUB Y N 39 A1JJN C13 C20 SING Y N 40 A1JJN C13 C14 SING N N 41 A1JJN C14 C15 DOUB Y N 42 A1JJN C14 C19 SING Y N 43 A1JJN C15 C16 SING Y N 44 A1JJN C19 C18 DOUB Y N 45 A1JJN C16 C17 DOUB Y N 46 A1JJN C18 C17 SING Y N 47 A1JJN C11 H91 SING N N 48 A1JJN C7 H92 SING N N 49 A1JJN C9 H8 SING N N 50 A1JJN C22 H1 SING N N 51 A1JJN C22 H2 SING N N 52 A1JJN C31 H3 SING N N 53 A1JJN C12 H4 SING N N 54 A1JJN C15 H5 SING N N 55 A1JJN C16 H9 SING N N 56 A1JJN C20 H10 SING N N 57 A1JJN C21 H11 SING N N 58 A1JJN C27 H12 SING N N 59 A1JJN C10 HO8 SING N N 60 A1JJN C10 HO1B SING N N 61 A1JJN O2 HO7 SING N N 62 A1JJN C32 H6 SING N N 63 A1JJN C5 H7 SING N N 64 A1JJN C17 H18 SING N N 65 A1JJN C23 H19 SING N N 66 A1JJN C23 H20 SING N N 67 A1JJN C25 H21 SING N N 68 A1JJN C18 H22 SING N N 69 A1JJN C19 H23 SING N N 70 A1JJN C26 H24 SING N N 71 A1JJN C3 H111 SING N N 72 A1JJN C3 H112 SING N N 73 A1JJN C3 H113 SING N N 74 A1JJN N5 HN5 SING N N 75 A1JJN N1 HO9 SING N N 76 A1JJN O1A HO4 SING N N 77 A1JJN O1 H13 SING N N 78 A1JJN O7 H14 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JJN InChI InChI 1.06 "InChI=1S/C31H32Cl2N2O9/c1-17(36)35-26-23(37)14-31(30(41)42,43-16-21-8-5-9-22(32)25(21)33)44-28(26)27(39)24(38)15-34-29(40)20-12-10-19(11-13-20)18-6-3-2-4-7-18/h2-13,23-24,26-28,37-39H,14-16H2,1H3,(H,34,40)(H,35,36)(H,41,42)/t23-,24+,26+,27+,28+,31+/m0/s1" A1JJN InChIKey InChI 1.06 AEXVCMOHPCUNDQ-QOFYJGRBSA-N A1JJN SMILES_CANONICAL CACTVS 3.385 "CC(=O)N[C@@H]1[C@@H](O)C[C@@](OCc2cccc(Cl)c2Cl)(O[C@H]1[C@H](O)[C@H](O)CNC(=O)c3ccc(cc3)c4ccccc4)C(O)=O" A1JJN SMILES CACTVS 3.385 "CC(=O)N[CH]1[CH](O)C[C](OCc2cccc(Cl)c2Cl)(O[CH]1[CH](O)[CH](O)CNC(=O)c3ccc(cc3)c4ccccc4)C(O)=O" A1JJN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)N[C@@H]1[C@H](C[C@@](O[C@H]1[C@@H]([C@@H](CNC(=O)c2ccc(cc2)c3ccccc3)O)O)(C(=O)O)OCc4cccc(c4Cl)Cl)O" A1JJN SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1C(CC(OC1C(C(CNC(=O)c2ccc(cc2)c3ccccc3)O)O)(C(=O)O)OCc4cccc(c4Cl)Cl)O" # _pdbx_chem_comp_identifier.comp_id A1JJN _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},4~{S},5~{R},6~{R})-5-acetamido-2-[[2,3-bis(chloranyl)phenyl]methoxy]-6-[(1~{R},2~{R})-1,2-bis(oxidanyl)-3-[(4-phenylphenyl)carbonylamino]propyl]-4-oxidanyl-oxane-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JJN "Create component" 2025-07-07 PDBE A1JJN "Initial release" 2025-12-10 RCSB #