data_A1JJS # _chem_comp.id A1JJS _chem_comp.name "Ruthenium[II]-toluene-phosphaadamantane" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H15 N3 P Ru" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-16 _chem_comp.pdbx_modified_date 2026-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 345.322 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JJS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RXV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JJS C10 C1 C 0 1 N N N N N N -31.342 -48.275 39.548 -31.342 -48.275 39.548 C10 A1JJS 1 A1JJS C16 C2 C 0 1 N N N N N N -30.240 -47.431 34.132 -30.240 -47.431 34.132 C16 A1JJS 2 A1JJS C18 C3 C 0 1 N N N N N N -32.161 -49.449 34.866 -32.161 -49.449 34.866 C18 A1JJS 3 A1JJS C19 C4 C 0 1 N N N N N N -31.896 -46.859 32.412 -31.896 -46.859 32.412 C19 A1JJS 4 A1JJS C20 C5 C 0 1 N N N N N N -33.031 -46.726 34.563 -33.031 -46.726 34.563 C20 A1JJS 5 A1JJS C21 C6 C 0 1 N N N N N N -33.532 -48.571 33.051 -33.532 -48.571 33.051 C21 A1JJS 6 A1JJS C1 C7 C 0 1 N N N N N N -32.274 -50.459 38.582 -32.274 -50.459 38.582 C1 A1JJS 7 A1JJS C2 C8 C 0 1 N N N N N N -31.285 -49.323 38.557 -31.285 -49.323 38.557 C2 A1JJS 8 A1JJS C3 C9 C 0 1 N N N N N N -30.259 -49.294 37.542 -30.259 -49.294 37.542 C3 A1JJS 9 A1JJS C4 C10 C 0 1 N N N N N N -29.299 -48.230 37.505 -29.299 -48.230 37.505 C4 A1JJS 10 A1JJS C5 C11 C 0 1 N N N N N N -29.344 -47.161 38.484 -29.344 -47.161 38.484 C5 A1JJS 11 A1JJS C9 C12 C 0 1 N N N N N N -30.379 -47.215 39.508 -30.379 -47.215 39.508 C9 A1JJS 12 A1JJS RU RU1 RU 0 0 N N N N N N -31.366 -47.324 37.563 -31.366 -47.324 37.563 RU A1JJS 13 A1JJS P1 P1 P 0 1 N N N N N N -31.658 -47.721 35.274 -31.658 -47.721 35.274 P1 A1JJS 14 A1JJS N3 N1 N 0 1 N N N N N N -32.417 -49.476 33.410 -32.417 -49.476 33.410 N3 A1JJS 15 A1JJS C17 C13 C 0 1 N N N N N N -31.184 -49.156 32.649 -31.184 -49.156 32.649 C17 A1JJS 16 A1JJS N2 N2 N 0 1 N N N N N N -33.151 -47.145 33.153 -33.151 -47.145 33.153 N2 A1JJS 17 A1JJS N1 N3 N 0 1 N N N N N N -30.764 -47.742 32.778 -30.764 -47.742 32.778 N1 A1JJS 18 A1JJS H16A H1 H 0 0 N N N N N N -29.908 -46.384 34.187 -29.908 -46.384 34.187 H16A A1JJS 19 A1JJS H16B H2 H 0 0 N N N N N N -29.400 -48.095 34.383 -29.400 -48.095 34.383 H16B A1JJS 20 A1JJS H18A H3 H 0 0 N N N N N N -31.354 -50.151 35.124 -31.354 -50.151 35.124 H18A A1JJS 21 A1JJS H18B H4 H 0 0 N N N N N N -33.073 -49.720 35.418 -33.073 -49.720 35.418 H18B A1JJS 22 A1JJS H19A H5 H 0 0 N N N N N N -31.603 -45.819 32.617 -31.603 -45.819 32.617 H19A A1JJS 23 A1JJS H19B H6 H 0 0 N N N N N N -32.094 -46.979 31.337 -32.094 -46.979 31.337 H19B A1JJS 24 A1JJS H20A H7 H 0 0 N N N N N N -33.968 -46.928 35.103 -33.968 -46.928 35.103 H20A A1JJS 25 A1JJS H20B H8 H 0 0 N N N N N N -32.797 -45.653 34.624 -32.797 -45.653 34.624 H20B A1JJS 26 A1JJS H21A H9 H 0 0 N N N N N N -34.376 -48.762 33.731 -34.375 -48.762 33.731 H21A A1JJS 27 A1JJS H21B H10 H 0 0 N N N N N N -33.840 -48.782 32.016 -33.840 -48.782 32.016 H21B A1JJS 28 A1JJS H11 H11 H 0 1 N N N N N N -32.976 -50.316 39.417 -32.976 -50.316 39.417 H11 A1JJS 29 A1JJS H12 H12 H 0 1 N N N N N N -32.831 -50.481 37.634 -32.831 -50.481 37.634 H12 A1JJS 30 A1JJS H13 H13 H 0 1 N N N N N N -31.737 -51.410 38.714 -31.737 -51.410 38.714 H13 A1JJS 31 A1JJS H17A H15 H 0 0 N N N N N N -31.365 -49.370 31.585 -31.365 -49.370 31.585 H17A A1JJS 32 A1JJS H17B H16 H 0 0 N N N N N N -30.370 -49.797 33.019 -30.370 -49.797 33.019 H17B A1JJS 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JJS P1 C16 SING N N 1 A1JJS C18 P1 SING N N 2 A1JJS C20 P1 SING N N 3 A1JJS P1 RU SING N N 4 A1JJS C1 C2 SING N N 5 A1JJS C16 N1 SING N N 6 A1JJS N1 C17 SING N N 7 A1JJS N1 C19 SING N N 8 A1JJS C2 C3 SING N N 9 A1JJS C2 C10 DOUB N N 10 A1JJS C2 RU SING N N 11 A1JJS C19 N2 SING N N 12 A1JJS N2 C20 SING N N 13 A1JJS N2 C21 SING N N 14 A1JJS C3 C4 DOUB N N 15 A1JJS C3 RU SING N N 16 A1JJS C17 N3 SING N N 17 A1JJS N3 C18 SING N N 18 A1JJS C21 N3 SING N N 19 A1JJS C4 C5 SING N N 20 A1JJS C4 RU SING N N 21 A1JJS C5 C9 DOUB N N 22 A1JJS C5 RU SING N N 23 A1JJS C9 C10 SING N N 24 A1JJS C9 RU SING N N 25 A1JJS C10 RU SING N N 26 A1JJS C16 H16A SING N N 27 A1JJS C16 H16B SING N N 28 A1JJS C18 H18A SING N N 29 A1JJS C18 H18B SING N N 30 A1JJS C19 H19A SING N N 31 A1JJS C19 H19B SING N N 32 A1JJS C20 H20A SING N N 33 A1JJS C20 H20B SING N N 34 A1JJS C21 H21A SING N N 35 A1JJS C21 H21B SING N N 36 A1JJS C1 H11 SING N N 37 A1JJS C1 H12 SING N N 38 A1JJS C1 H13 SING N N 39 A1JJS C17 H17A SING N N 40 A1JJS C17 H17B SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JJS InChI InChI 1.06 "InChI=1S/C7H3.C6H12N3P.Ru/c1-7-5-3-2-4-6-7;1-7-2-9-3-8(1)5-10(4-7)6-9;/h1H3;1-6H2;/q;;-1/p+1" A1JJS InChIKey InChI 1.06 ZGQSHMNOKVXRBH-UHFFFAOYSA-O A1JJS SMILES_CANONICAL CACTVS 3.385 "[Ru].CC1=CC=CC=C1.C2N3CN4CN2CP(C3)C4" A1JJS SMILES CACTVS 3.385 "[Ru].CC1=CC=CC=C1.C2N3CN4CN2CP(C3)C4" A1JJS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC12=C3[Ru]1456(C3=C4C5=C62)[P]78CN9CN(C7)CN(C9)C8" A1JJS SMILES "OpenEye OEToolkits" 2.0.7 "CC12=C3[Ru]1456(C3=C4C5=C62)[P]78CN9CN(C7)CN(C9)C8" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JJS "Create component" 2025-07-16 PDBE A1JJS "Initial release" 2026-07-22 RCSB #