data_A1JJW # _chem_comp.id A1JJW _chem_comp.name "2-(4-Benzyloxyphenylthio)propanoyl-CoA" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C37 H50 N7 O18 P3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (2~{R})-2-(4-phenylmethoxyphenyl)sulfanylpropanethioate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-16 _chem_comp.pdbx_modified_date 2026-07-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1037.880 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JJW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RYZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JJW C4 C1 C 0 1 Y N N N N N -31.743 95.798 -27.491 -13.598 2.239 1.342 C4 A1JJW 1 A1JJW C14 C2 C 0 1 Y N N N N N -30.292 98.135 -27.136 -11.512 2.639 -0.441 C14 A1JJW 2 A1JJW C5 C3 C 0 1 Y N N N N N -32.235 96.996 -27.969 -12.815 3.373 1.440 C5 A1JJW 3 A1JJW C6 C4 C 0 1 Y N N N N N -31.512 98.169 -27.805 -11.772 3.575 0.549 C6 A1JJW 4 A1JJW C11 C5 C 0 1 Y N N N N N -33.882 103.603 -30.016 -7.842 8.482 0.429 C11 A1JJW 5 A1JJW C7 C6 C 0 1 N N N N N N -31.379 100.546 -28.328 -9.944 4.836 -0.303 C7 A1JJW 6 A1JJW C8 C7 C 0 1 Y N N N N N -32.257 101.616 -28.921 -9.205 6.123 -0.042 C8 A1JJW 7 A1JJW C9 C8 C 0 1 Y N N N N N -33.546 101.822 -28.438 -8.123 6.136 0.818 C9 A1JJW 8 A1JJW C10 C9 C 0 1 Y N N N N N -34.355 102.812 -28.983 -7.445 7.316 1.058 C10 A1JJW 9 A1JJW C12 C10 C 0 1 Y N N N N N -32.603 103.409 -30.506 -8.921 8.467 -0.435 C12 A1JJW 10 A1JJW C13 C11 C 0 1 Y N N N N N -31.793 102.418 -29.961 -9.603 7.288 -0.670 C13 A1JJW 11 A1JJW N1 N1 N 0 1 N N N N N N -33.846 88.572 -28.578 -7.340 -3.287 -0.543 N1 A1JJW 12 A1JJW N2 N2 N 0 1 N N N N N N -34.988 87.236 -31.917 -2.749 -4.934 -0.006 N2 A1JJW 13 A1JJW C3 C12 C 0 1 Y N N N N N -30.523 95.743 -26.820 -13.339 1.301 0.351 C3 A1JJW 14 A1JJW N3 N3 N 0 1 Y N N N N N -35.796 91.076 -42.430 8.531 3.618 0.314 N3 A1JJW 15 A1JJW C1 C13 C 0 1 N N N N N N -31.310 93.248 -23.907 -14.415 -2.266 -1.501 C1 A1JJW 16 A1JJW C2 C14 C 0 1 N N R N N N -31.353 93.284 -25.423 -13.531 -1.082 -1.105 C2 A1JJW 17 A1JJW S1 S1 S 0 1 N N N N N N -29.939 94.169 -26.211 -14.333 -0.149 0.228 S1 A1JJW 18 A1JJW O1 O1 O 0 1 N N N N N N -32.100 99.297 -28.327 -11.002 4.692 0.647 O1 A1JJW 19 A1JJW C15 C15 C 0 1 Y N N N N N -29.803 96.935 -26.650 -12.297 1.507 -0.544 C15 A1JJW 20 A1JJW C16 C16 C 0 1 N N N N N N -31.535 91.879 -25.944 -12.194 -1.588 -0.630 C16 A1JJW 21 A1JJW O2 O2 O 0 1 N N N N N N -31.957 90.987 -25.191 -11.996 -1.759 0.554 O2 A1JJW 22 A1JJW S2 S2 S 0 1 N N N N N N -31.200 91.680 -27.698 -10.954 -1.923 -1.762 S2 A1JJW 23 A1JJW C17 C17 C 0 1 N N N N N N -31.941 90.016 -27.859 -9.645 -2.476 -0.641 C17 A1JJW 24 A1JJW C18 C18 C 0 1 N N N N N N -33.396 89.951 -28.303 -8.400 -2.840 -1.451 C18 A1JJW 25 A1JJW C19 C19 C 0 1 N N N N N N -33.454 87.883 -29.656 -6.143 -3.662 -1.037 C19 A1JJW 26 A1JJW O3 O3 O 0 1 N N N N N N -32.701 88.380 -30.503 -5.944 -3.629 -2.233 O3 A1JJW 27 A1JJW C20 C20 C 0 1 N N N N N N -33.956 86.467 -29.784 -5.054 -4.122 -0.103 C20 A1JJW 28 A1JJW C21 C21 C 0 1 N N N N N N -34.387 86.109 -31.204 -3.808 -4.486 -0.913 C21 A1JJW 29 A1JJW C22 C22 C 0 1 N N N N N N -36.233 87.662 -31.701 -1.552 -5.308 -0.499 C22 A1JJW 30 A1JJW O4 O4 O 0 1 N N N N N N -37.011 87.133 -30.871 -1.382 -5.366 -1.699 O4 A1JJW 31 A1JJW C23 C23 C 0 1 N N R N N N -36.678 88.845 -32.556 -0.425 -5.655 0.439 C23 A1JJW 32 A1JJW O5 O5 O 0 1 N N N N N N -35.675 89.275 -33.492 -0.914 -5.684 1.781 O5 A1JJW 33 A1JJW C24 C24 C 0 1 N N N N N N -37.080 90.083 -31.689 0.679 -4.603 0.321 C24 A1JJW 34 A1JJW C25 C25 C 0 1 N N N N N N -35.824 90.933 -31.432 1.222 -4.592 -1.109 C25 A1JJW 35 A1JJW C26 C26 C 0 1 N N N N N N -37.726 89.698 -30.356 0.108 -3.224 0.661 C26 A1JJW 36 A1JJW C27 C27 C 0 1 N N N N N N -38.231 90.867 -32.338 1.811 -4.940 1.294 C27 A1JJW 37 A1JJW O6 O6 O 0 1 N N N N N N -37.920 91.289 -33.672 2.842 -3.957 1.184 O6 A1JJW 38 A1JJW P1 P1 P 0 1 N N N N N N -39.013 91.455 -34.832 4.190 -3.997 2.063 P1 A1JJW 39 A1JJW O7 O7 O 0 1 N N N N N N -40.296 90.710 -34.728 3.823 -3.795 3.618 O7 A1JJW 40 A1JJW O8 O8 O 0 1 N N N N N N -38.846 92.892 -35.157 4.859 -5.305 1.881 O8 A1JJW 41 A1JJW O9 O9 O 0 1 N N N N N N -38.202 90.612 -35.911 5.178 -2.818 1.587 O9 A1JJW 42 A1JJW P2 P2 P 0 1 N N N N N N -38.280 89.048 -36.266 6.759 -2.555 1.737 P2 A1JJW 43 A1JJW O10 O10 O 0 1 N N N N N N -36.973 88.476 -35.836 7.086 -2.097 3.245 O10 A1JJW 44 A1JJW O11 O11 O 0 1 N N N N N N -39.467 88.219 -35.899 7.498 -3.800 1.428 O11 A1JJW 45 A1JJW O12 O12 O 0 1 N N N N N N -38.257 89.218 -37.863 7.209 -1.396 0.714 O12 A1JJW 46 A1JJW C28 C28 C 0 1 N N N N N N -37.379 90.214 -38.495 8.571 -1.004 0.532 C28 A1JJW 47 A1JJW C29 C29 C 0 1 N N R N N N -38.063 90.793 -39.720 8.645 0.117 -0.506 C29 A1JJW 48 A1JJW O13 O13 O 0 1 N N N N N N -37.098 91.467 -40.559 8.016 1.302 0.009 O13 A1JJW 49 A1JJW C30 C30 C 0 1 N N R N N N -37.135 90.917 -41.880 8.747 2.431 -0.517 C30 A1JJW 50 A1JJW C31 C31 C 0 1 Y N N N N N -34.600 90.765 -41.830 8.075 3.632 1.598 C31 A1JJW 51 A1JJW N4 N4 N 0 1 Y N N N N N -33.555 91.142 -42.523 8.002 4.857 2.031 N4 A1JJW 52 A1JJW C32 C32 C 0 1 Y N N N N N -34.096 91.767 -43.630 8.405 5.705 1.054 C32 A1JJW 53 A1JJW C33 C33 C 0 1 Y N N N N N -33.503 92.387 -44.737 8.539 7.100 0.950 C33 A1JJW 54 A1JJW N5 N5 N 0 1 N N N N N N -32.190 92.522 -44.887 8.211 7.924 2.012 N5 A1JJW 55 A1JJW N6 N6 N 0 1 Y N N N N N -34.332 92.947 -45.656 8.989 7.609 -0.192 N6 A1JJW 56 A1JJW C34 C34 C 0 1 Y N N N N N -35.654 92.824 -45.489 9.305 6.830 -1.211 C34 A1JJW 57 A1JJW N7 N7 N 0 1 Y N N N N N -36.322 92.247 -44.498 9.196 5.519 -1.158 N7 A1JJW 58 A1JJW C35 C35 C 0 1 Y N N N N N -35.478 91.739 -43.585 8.755 4.920 -0.057 C35 A1JJW 59 A1JJW C36 C36 C 0 1 N N R N N N -37.663 89.507 -41.684 10.226 1.972 -0.438 C36 A1JJW 60 A1JJW O14 O14 O 0 1 N N N N N N -38.043 88.956 -42.923 11.027 2.666 -1.396 O14 A1JJW 61 A1JJW C37 C37 C 0 1 N N S N N N -38.771 89.811 -40.666 10.118 0.466 -0.796 C37 A1JJW 62 A1JJW O15 O15 O 0 1 N N N N N N -39.926 90.469 -41.190 10.423 0.257 -2.177 O15 A1JJW 63 A1JJW P3 P3 P 0 1 N N N N N N -41.374 89.741 -41.203 11.613 -0.705 -2.676 P3 A1JJW 64 A1JJW O16 O16 O 0 1 N N N N N N -41.643 88.837 -40.024 13.028 -0.100 -2.200 O16 A1JJW 65 A1JJW O17 O17 O 0 1 N N N N N N -41.262 88.828 -42.390 11.433 -2.054 -2.095 O17 A1JJW 66 A1JJW O18 O18 O 0 1 N N N N N N -42.311 90.917 -41.311 11.585 -0.804 -4.283 O18 A1JJW 67 A1JJW H1 H1 H 0 1 N N N N N N -32.311 94.892 -27.639 -14.408 2.080 2.038 H1 A1JJW 68 A1JJW H2 H2 H 0 1 N N N N N N -29.727 99.045 -26.996 -10.702 2.799 -1.137 H2 A1JJW 69 A1JJW H3 H3 H 0 1 N N N N N N -33.189 97.020 -28.474 -13.016 4.102 2.211 H3 A1JJW 70 A1JJW H4 H4 H 0 1 N N N N N N -34.512 104.372 -30.439 -7.313 9.404 0.617 H4 A1JJW 71 A1JJW H5 H5 H 0 1 N N N N N N -30.464 100.444 -28.930 -10.361 4.854 -1.311 H5 A1JJW 72 A1JJW H6 H6 H 0 1 N N N N N N -31.111 100.818 -27.297 -9.255 3.996 -0.211 H6 A1JJW 73 A1JJW H7 H7 H 0 1 N N N N N N -33.921 101.207 -27.633 -7.807 5.224 1.303 H7 A1JJW 74 A1JJW H8 H8 H 0 1 N N N N N N -35.353 102.964 -28.600 -6.605 7.328 1.737 H8 A1JJW 75 A1JJW H9 H9 H 0 1 N N N N N N -32.233 104.027 -31.311 -9.232 9.378 -0.926 H9 A1JJW 76 A1JJW H10 H10 H 0 1 N N N N N N -30.796 102.269 -30.348 -10.445 7.277 -1.345 H10 A1JJW 77 A1JJW H11 H11 H 0 1 N N N N N N -34.470 88.134 -27.931 -7.500 -3.314 0.413 H11 A1JJW 78 A1JJW H12 H12 H 0 1 N N N N N N -34.436 87.712 -32.602 -2.909 -4.960 0.951 H12 A1JJW 79 A1JJW H13 H13 H 0 1 N N N N N N -32.187 92.703 -23.528 -14.629 -2.870 -0.620 H13 A1JJW 80 A1JJW H14 H14 H 0 1 N N N N N N -30.392 92.739 -23.578 -15.349 -1.898 -1.925 H14 A1JJW 81 A1JJW H15 H15 H 0 1 N N N N N N -31.319 94.276 -23.516 -13.895 -2.875 -2.241 H15 A1JJW 82 A1JJW H16 H16 H 0 1 N N N N N N -32.238 93.867 -25.717 -13.388 -0.431 -1.968 H16 A1JJW 83 A1JJW H17 H17 H 0 1 N N N N N N -28.855 96.916 -26.133 -12.095 0.778 -1.315 H17 A1JJW 84 A1JJW H18 H18 H 0 1 N N N N N N -31.871 89.524 -26.878 -9.403 -1.675 0.057 H18 A1JJW 85 A1JJW H19 H19 H 0 1 N N N N N N -31.344 89.456 -28.594 -9.987 -3.350 -0.087 H19 A1JJW 86 A1JJW H20 H20 H 0 1 N N N N N N -33.511 90.548 -29.219 -8.058 -1.966 -2.005 H20 A1JJW 87 A1JJW H21 H21 H 0 1 N N N N N N -34.026 90.375 -27.507 -8.642 -3.641 -2.149 H21 A1JJW 88 A1JJW H22 H22 H 0 1 N N N N N N -34.819 86.340 -29.114 -4.812 -3.321 0.595 H22 A1JJW 89 A1JJW H23 H23 H 0 1 N N N N N N -33.151 85.782 -29.479 -5.395 -4.996 0.451 H23 A1JJW 90 A1JJW H24 H24 H 0 1 N N N N N N -35.123 85.293 -31.152 -3.467 -3.612 -1.468 H24 A1JJW 91 A1JJW H25 H25 H 0 1 N N N N N N -33.503 85.770 -31.764 -4.050 -5.287 -1.612 H25 A1JJW 92 A1JJW H26 H26 H 0 1 N N N N N N -37.573 88.535 -33.115 -0.023 -6.634 0.178 H26 A1JJW 93 A1JJW H27 H27 H 0 1 N N N N N N -36.005 90.010 -33.995 -1.288 -4.844 2.082 H27 A1JJW 94 A1JJW H28 H28 H 0 1 N N N N N N -36.092 91.809 -30.822 0.454 -4.220 -1.787 H28 A1JJW 95 A1JJW H29 H29 H 0 1 N N N N N N -35.076 90.329 -30.898 2.097 -3.943 -1.161 H29 A1JJW 96 A1JJW H30 H30 H 0 1 N N N N N N -35.406 91.269 -32.392 1.504 -5.604 -1.399 H30 A1JJW 97 A1JJW H31 H31 H 0 1 N N N N N N -37.984 90.609 -29.796 -0.278 -3.232 1.679 H31 A1JJW 98 A1JJW H32 H32 H 0 1 N N N N N N -38.638 89.114 -30.546 0.895 -2.475 0.576 H32 A1JJW 99 A1JJW H33 H33 H 0 1 N N N N N N -37.020 89.094 -29.767 -0.698 -2.984 -0.032 H33 A1JJW 100 A1JJW H34 H34 H 0 1 N N N N N N -38.442 91.756 -31.726 1.424 -4.948 2.313 H34 A1JJW 101 A1JJW H35 H35 H 0 1 N N N N N N -39.123 90.224 -32.370 2.218 -5.922 1.052 H35 A1JJW 102 A1JJW H36 H36 H 0 1 N N N N N N -41.020 91.299 -34.904 3.381 -2.957 3.811 H36 A1JJW 103 A1JJW H37 H37 H 0 1 N N N N N N -37.120 87.653 -35.386 6.635 -1.286 3.516 H37 A1JJW 104 A1JJW H38 H38 H 0 1 N N N N N N -36.437 89.733 -38.795 8.977 -0.650 1.480 H38 A1JJW 105 A1JJW H39 H39 H 0 1 N N N N N N -37.166 91.021 -37.779 9.152 -1.859 0.186 H39 A1JJW 106 A1JJW H40 H40 H 0 1 N N N N N N -38.809 91.525 -39.377 8.151 -0.196 -1.425 H40 A1JJW 107 A1JJW H41 H41 H 0 1 N N N N N N -37.853 91.478 -42.497 8.462 2.630 -1.550 H41 A1JJW 108 A1JJW H42 H42 H 0 1 N N N N N N -34.529 90.259 -40.879 7.813 2.755 2.172 H42 A1JJW 109 A1JJW H43 H43 H 0 1 N N N N N N -32.001 93.053 -45.713 7.884 7.541 2.841 H43 A1JJW 110 A1JJW H44 H44 H 0 1 N N N N N N -31.811 92.996 -44.092 8.308 8.886 1.928 H44 A1JJW 111 A1JJW H45 H45 H 0 1 N N N N N N -36.263 93.255 -46.270 9.667 7.285 -2.121 H45 A1JJW 112 A1JJW H46 H46 H 0 1 N N N N N N -36.889 88.892 -41.201 10.621 2.106 0.569 H46 A1JJW 113 A1JJW H47 H47 H 0 1 N N N N N N -38.372 88.075 -42.791 11.051 3.624 -1.267 H47 A1JJW 114 A1JJW H48 H48 H 0 1 N N N N N N -39.042 88.895 -40.121 10.781 -0.125 -0.164 H48 A1JJW 115 A1JJW H49 H49 H 0 1 N N N N N N -41.674 87.934 -40.317 13.213 0.784 -2.544 H49 A1JJW 116 A1JJW H50 H50 H 0 1 N N N N N N -42.724 90.916 -42.166 12.276 -1.369 -4.654 H50 A1JJW 117 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JJW N6 C34 SING Y N 1 A1JJW N6 C33 DOUB Y N 2 A1JJW C34 N7 DOUB Y N 3 A1JJW N5 C33 SING N N 4 A1JJW C33 C32 SING Y N 5 A1JJW N7 C35 SING Y N 6 A1JJW C32 C35 DOUB Y N 7 A1JJW C32 N4 SING Y N 8 A1JJW C35 N3 SING Y N 9 A1JJW O14 C36 SING N N 10 A1JJW N4 C31 DOUB Y N 11 A1JJW N3 C30 SING N N 12 A1JJW N3 C31 SING Y N 13 A1JJW O17 P3 DOUB N N 14 A1JJW C30 C36 SING N N 15 A1JJW C30 O13 SING N N 16 A1JJW C36 C37 SING N N 17 A1JJW O18 P3 SING N N 18 A1JJW P3 O15 SING N N 19 A1JJW P3 O16 SING N N 20 A1JJW O15 C37 SING N N 21 A1JJW C37 C29 SING N N 22 A1JJW O13 C29 SING N N 23 A1JJW C29 C28 SING N N 24 A1JJW C28 O12 SING N N 25 A1JJW O12 P2 SING N N 26 A1JJW P2 O9 SING N N 27 A1JJW P2 O11 DOUB N N 28 A1JJW P2 O10 SING N N 29 A1JJW O9 P1 SING N N 30 A1JJW O8 P1 DOUB N N 31 A1JJW P1 O7 SING N N 32 A1JJW P1 O6 SING N N 33 A1JJW O6 C27 SING N N 34 A1JJW O5 C23 SING N N 35 A1JJW C23 C22 SING N N 36 A1JJW C23 C24 SING N N 37 A1JJW C27 C24 SING N N 38 A1JJW N2 C22 SING N N 39 A1JJW N2 C21 SING N N 40 A1JJW C22 O4 DOUB N N 41 A1JJW C24 C25 SING N N 42 A1JJW C24 C26 SING N N 43 A1JJW C21 C20 SING N N 44 A1JJW C12 C11 DOUB Y N 45 A1JJW C12 C13 SING Y N 46 A1JJW O3 C19 DOUB N N 47 A1JJW C11 C10 SING Y N 48 A1JJW C13 C8 DOUB Y N 49 A1JJW C20 C19 SING N N 50 A1JJW C19 N1 SING N N 51 A1JJW C10 C9 DOUB Y N 52 A1JJW C8 C9 SING Y N 53 A1JJW C8 C7 SING N N 54 A1JJW N1 C18 SING N N 55 A1JJW C7 O1 SING N N 56 A1JJW O1 C6 SING N N 57 A1JJW C18 C17 SING N N 58 A1JJW C5 C6 DOUB Y N 59 A1JJW C5 C4 SING Y N 60 A1JJW C17 S2 SING N N 61 A1JJW C6 C14 SING Y N 62 A1JJW S2 C16 SING N N 63 A1JJW C4 C3 DOUB Y N 64 A1JJW C14 C15 DOUB Y N 65 A1JJW C3 C15 SING Y N 66 A1JJW C3 S1 SING N N 67 A1JJW S1 C2 SING N N 68 A1JJW C16 C2 SING N N 69 A1JJW C16 O2 DOUB N N 70 A1JJW C2 C1 SING N N 71 A1JJW C4 H1 SING N N 72 A1JJW C14 H2 SING N N 73 A1JJW C5 H3 SING N N 74 A1JJW C11 H4 SING N N 75 A1JJW C7 H5 SING N N 76 A1JJW C7 H6 SING N N 77 A1JJW C9 H7 SING N N 78 A1JJW C10 H8 SING N N 79 A1JJW C12 H9 SING N N 80 A1JJW C13 H10 SING N N 81 A1JJW N1 H11 SING N N 82 A1JJW N2 H12 SING N N 83 A1JJW C1 H13 SING N N 84 A1JJW C1 H14 SING N N 85 A1JJW C1 H15 SING N N 86 A1JJW C2 H16 SING N N 87 A1JJW C15 H17 SING N N 88 A1JJW C17 H18 SING N N 89 A1JJW C17 H19 SING N N 90 A1JJW C18 H20 SING N N 91 A1JJW C18 H21 SING N N 92 A1JJW C20 H22 SING N N 93 A1JJW C20 H23 SING N N 94 A1JJW C21 H24 SING N N 95 A1JJW C21 H25 SING N N 96 A1JJW C23 H26 SING N N 97 A1JJW O5 H27 SING N N 98 A1JJW C25 H28 SING N N 99 A1JJW C25 H29 SING N N 100 A1JJW C25 H30 SING N N 101 A1JJW C26 H31 SING N N 102 A1JJW C26 H32 SING N N 103 A1JJW C26 H33 SING N N 104 A1JJW C27 H34 SING N N 105 A1JJW C27 H35 SING N N 106 A1JJW O7 H36 SING N N 107 A1JJW O10 H37 SING N N 108 A1JJW C28 H38 SING N N 109 A1JJW C28 H39 SING N N 110 A1JJW C29 H40 SING N N 111 A1JJW C30 H41 SING N N 112 A1JJW C31 H42 SING N N 113 A1JJW N5 H43 SING N N 114 A1JJW N5 H44 SING N N 115 A1JJW C34 H45 SING N N 116 A1JJW C36 H46 SING N N 117 A1JJW O14 H47 SING N N 118 A1JJW C37 H48 SING N N 119 A1JJW O16 H49 SING N N 120 A1JJW O18 H50 SING N N 121 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JJW InChI InChI 1.06 "InChI=1S/C37H50N7O18P3S2/c1-22(67-25-11-9-24(10-12-25)57-17-23-7-5-4-6-8-23)36(49)66-16-15-39-27(45)13-14-40-34(48)31(47)37(2,3)19-59-65(55,56)62-64(53,54)58-18-26-30(61-63(50,51)52)29(46)35(60-26)44-21-43-28-32(38)41-20-42-33(28)44/h4-12,20-22,26,29-31,35,46-47H,13-19H2,1-3H3,(H,39,45)(H,40,48)(H,53,54)(H,55,56)(H2,38,41,42)(H2,50,51,52)/t22-,26-,29-,30-,31+,35-/m1/s1" A1JJW InChIKey InChI 1.06 AFXSGLDISQXDMZ-AZQUWFSNSA-N A1JJW SMILES_CANONICAL CACTVS 3.385 "C[C@@H](Sc1ccc(OCc2ccccc2)cc1)C(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]3O[C@H]([C@H](O)[C@@H]3O[P](O)(O)=O)n4cnc5c(N)ncnc45" A1JJW SMILES CACTVS 3.385 "C[CH](Sc1ccc(OCc2ccccc2)cc1)C(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O)[CH]3O[P](O)(O)=O)n4cnc5c(N)ncnc45" A1JJW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](C(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O)Sc4ccc(cc4)OCc5ccccc5" A1JJW SMILES "OpenEye OEToolkits" 2.0.7 "CC(C(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O)Sc4ccc(cc4)OCc5ccccc5" # _pdbx_chem_comp_identifier.comp_id A1JJW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (2~{R})-2-(4-phenylmethoxyphenyl)sulfanylpropanethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JJW "Create component" 2025-07-16 PDBE A1JJW "Initial release" 2026-07-29 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1JJW _pdbx_chem_comp_synonyms.name "~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (2~{R})-2-(4-phenylmethoxyphenyl)sulfanylpropanethioate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #