data_A1JKK # _chem_comp.id A1JKK _chem_comp.name "4-(5-chloranyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)morpholine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H11 Cl N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-07-16 _chem_comp.pdbx_modified_date 2026-07-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 238.674 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JKK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9RYT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JKK C5 C1 C 0 1 Y N N N N N 6.692 -15.502 15.268 -2.477 0.783 0.001 C5 A1JKK 1 A1JKK C7 C2 C 0 1 Y N N N N N 8.545 -14.606 16.118 -1.320 2.773 0.001 C7 A1JKK 2 A1JKK C15 C3 C 0 1 N N N N N N 9.671 -16.469 12.187 1.936 0.544 1.210 C15 A1JKK 3 A1JKK C11 C4 C 0 1 N N N N N N 10.403 -14.199 12.548 1.935 0.548 -1.210 C11 A1JKK 4 A1JKK C12 C5 C 0 1 N N N N N N 10.903 -14.238 11.127 3.262 -0.215 -1.199 C12 A1JKK 5 A1JKK C14 C6 C 0 1 N N N N N N 10.014 -16.357 10.723 3.263 -0.219 1.196 C14 A1JKK 6 A1JKK C16 C7 C 0 1 Y N N N N N 7.261 -15.583 13.993 -1.249 0.095 0.000 C16 A1JKK 7 A1JKK C2 C8 C 0 1 Y N N N N N 6.239 -16.148 13.147 -1.579 -1.329 -0.001 C2 A1JKK 8 A1JKK C3 C9 C 0 1 Y N N N N N 5.143 -16.372 13.934 -2.920 -1.417 -0.001 C3 A1JKK 9 A1JKK C9 C10 C 0 1 Y N N N N N 8.591 -15.114 13.895 -0.060 0.840 0.001 C9 A1JKK 10 A1JKK N10 N1 N 0 1 N N N N N N 9.302 -15.152 12.710 1.171 0.209 -0.000 N10 A1JKK 11 A1JKK N4 N2 N 0 1 Y N N N N N 5.413 -15.983 15.218 -3.468 -0.159 -0.004 N4 A1JKK 12 A1JKK N6 N3 N 0 1 Y N N N N N 7.296 -15.018 16.361 -2.460 2.115 0.002 N6 A1JKK 13 A1JKK N8 N4 N 0 1 Y N N N N N 9.230 -14.618 14.967 -0.147 2.167 0.003 N8 A1JKK 14 A1JKK O13 O1 O 0 1 N N N N N N 10.037 -14.999 10.290 3.977 0.099 -0.001 O13 A1JKK 15 A1JKK CL1 CL1 CL 0 0 N N N N N N 6.353 -16.452 11.431 -0.455 -2.652 0.001 CL1 A1JKK 16 A1JKK H1 H1 H 0 1 N N N N N N 9.076 -14.208 16.970 -1.345 3.852 0.001 H1 A1JKK 17 A1JKK H2 H2 H 0 1 N N N N N N 8.826 -17.162 12.313 1.362 0.262 2.093 H2 A1JKK 18 A1JKK H3 H3 H 0 1 N N N N N N 10.543 -16.850 12.739 2.132 1.616 1.231 H3 A1JKK 19 A1JKK H4 H4 H 0 1 N N N N N N 11.222 -14.467 13.231 2.132 1.620 -1.227 H4 A1JKK 20 A1JKK H5 H5 H 0 1 N N N N N N 10.047 -13.185 12.783 1.361 0.269 -2.093 H5 A1JKK 21 A1JKK H6 H6 H 0 1 N N N N N N 11.905 -14.693 11.113 3.066 -1.287 -1.236 H6 A1JKK 22 A1JKK H7 H7 H 0 1 N N N N N N 10.962 -13.210 10.740 3.856 0.075 -2.066 H7 A1JKK 23 A1JKK H8 H8 H 0 1 N N N N N N 9.261 -16.905 10.137 3.858 0.070 2.062 H8 A1JKK 24 A1JKK H9 H9 H 0 1 N N N N N N 11.006 -16.802 10.554 3.067 -1.291 1.230 H9 A1JKK 25 A1JKK H10 H10 H 0 1 N N N N N N 4.208 -16.792 13.594 -3.482 -2.339 -0.002 H10 A1JKK 26 A1JKK H11 H11 H 0 1 N N N N N N 4.781 -16.041 15.991 -4.418 0.034 -0.005 H11 A1JKK 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JKK O13 C14 SING N N 1 A1JKK O13 C12 SING N N 2 A1JKK C14 C15 SING N N 3 A1JKK C12 C11 SING N N 4 A1JKK CL1 C2 SING N N 5 A1JKK C15 N10 SING N N 6 A1JKK C11 N10 SING N N 7 A1JKK N10 C9 SING N N 8 A1JKK C2 C3 DOUB Y N 9 A1JKK C2 C16 SING Y N 10 A1JKK C9 C16 DOUB Y N 11 A1JKK C9 N8 SING Y N 12 A1JKK C3 N4 SING Y N 13 A1JKK C16 C5 SING Y N 14 A1JKK N8 C7 DOUB Y N 15 A1JKK N4 C5 SING Y N 16 A1JKK C5 N6 DOUB Y N 17 A1JKK C7 N6 SING Y N 18 A1JKK C7 H1 SING N N 19 A1JKK C15 H2 SING N N 20 A1JKK C15 H3 SING N N 21 A1JKK C11 H4 SING N N 22 A1JKK C11 H5 SING N N 23 A1JKK C12 H6 SING N N 24 A1JKK C12 H7 SING N N 25 A1JKK C14 H8 SING N N 26 A1JKK C14 H9 SING N N 27 A1JKK C3 H10 SING N N 28 A1JKK N4 H11 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JKK InChI InChI 1.06 "InChI=1S/C10H11ClN4O/c11-7-5-12-9-8(7)10(14-6-13-9)15-1-3-16-4-2-15/h5-6H,1-4H2,(H,12,13,14)" A1JKK InChIKey InChI 1.06 JUACSCUTEIIXAV-UHFFFAOYSA-N A1JKK SMILES_CANONICAL CACTVS 3.385 "Clc1c[nH]c2ncnc(N3CCOCC3)c12" A1JKK SMILES CACTVS 3.385 "Clc1c[nH]c2ncnc(N3CCOCC3)c12" A1JKK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(c2c([nH]1)ncnc2N3CCOCC3)Cl" A1JKK SMILES "OpenEye OEToolkits" 2.0.7 "c1c(c2c([nH]1)ncnc2N3CCOCC3)Cl" # _pdbx_chem_comp_identifier.comp_id A1JKK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-(5-chloranyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)morpholine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JKK "Create component" 2025-07-16 PDBE A1JKK "Initial release" 2026-07-29 RCSB #