data_A1JM2 # _chem_comp.id A1JM2 _chem_comp.name "(2~{R},3~{R},4~{S},5~{S})-2-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-5-(1,3-benzothiazol-2-ylsulfanylmethyl)oxolane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H17 N5 O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-08 _chem_comp.pdbx_modified_date 2026-01-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 415.489 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JM2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SAN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JM2 C4 C1 C 0 1 Y N N N N N 13.965 43.536 21.465 6.718 0.163 0.854 C4 A1JM2 1 A1JM2 C6 C2 C 0 1 Y N N N N N 16.026 42.760 21.192 4.572 -0.351 0.202 C6 A1JM2 2 A1JM2 C8 C3 C 0 1 Y N N N N N 17.872 41.497 21.224 2.826 -1.447 -0.684 C8 A1JM2 3 A1JM2 C9 C4 C 0 1 Y N N N N N 16.951 40.828 21.963 3.888 -2.239 -0.908 C9 A1JM2 4 A1JM2 C10 C5 C 0 1 Y N N N N N 15.757 41.618 21.959 5.051 -1.557 -0.344 C10 A1JM2 5 A1JM2 C11 C6 C 0 1 N N R N N N 17.987 43.693 19.954 2.333 0.773 0.391 C11 A1JM2 6 A1JM2 C13 C7 C 0 1 N N S N N N 19.289 43.581 18.017 0.146 1.471 0.428 C13 A1JM2 7 A1JM2 C14 C8 C 0 1 N N N N N N 19.985 42.278 17.676 -1.283 1.089 0.035 C14 A1JM2 8 A1JM2 C16 C9 C 0 1 Y N N N N N 22.145 41.117 16.294 -3.655 -0.101 0.702 C16 A1JM2 9 A1JM2 C18 C10 C 0 1 Y N N N N N 22.991 39.526 15.021 -5.774 -0.881 0.624 C18 A1JM2 10 A1JM2 C19 C11 C 0 1 Y N N N N N 23.487 38.893 13.879 -6.962 -1.514 1.048 C19 A1JM2 11 A1JM2 C22 C12 C 0 1 Y N N N N N 23.160 37.438 16.257 -6.847 -0.419 -1.497 C22 A1JM2 12 A1JM2 C23 C13 C 0 1 Y N N N N N 22.832 38.787 16.200 -5.735 -0.337 -0.663 C23 A1JM2 13 A1JM2 C2 C14 C 0 1 Y N N N N N 14.448 41.525 22.476 6.419 -1.846 -0.240 C2 A1JM2 14 A1JM2 C20 C15 C 0 1 Y N N N N N 23.816 37.545 13.934 -8.046 -1.590 0.211 C20 A1JM2 15 A1JM2 C21 C16 C 0 1 Y N N N N N 23.654 36.824 15.113 -7.994 -1.046 -1.064 C21 A1JM2 16 A1JM2 C25 C17 C 0 1 N N S N N N 20.051 44.416 19.044 0.796 2.331 -0.679 C25 A1JM2 17 A1JM2 C27 C18 C 0 1 N N R N N N 19.422 43.981 20.372 2.268 1.861 -0.704 C27 A1JM2 18 A1JM2 N1 N1 N 0 1 N N N N N N 14.038 40.483 23.207 6.936 -3.025 -0.748 N1 A1JM2 19 A1JM2 N17 N2 N 0 1 Y N N N N N 22.591 40.862 15.100 -4.617 -0.720 1.297 N17 A1JM2 20 A1JM2 N3 N3 N 0 1 Y N N N N N 13.563 42.508 22.211 7.208 -0.959 0.359 N3 A1JM2 21 A1JM2 N5 N4 N 0 1 Y N N N N N 15.160 43.745 20.919 5.441 0.471 0.788 N5 A1JM2 22 A1JM2 N7 N5 N 0 1 Y N N N N N 17.317 42.674 20.751 3.223 -0.315 -0.021 N7 A1JM2 23 A1JM2 O12 O1 O 0 1 N N N N N N 18.024 43.246 18.620 0.976 0.293 0.515 O12 A1JM2 24 A1JM2 O26 O2 O 0 1 N N N N N N 19.991 45.811 18.758 0.719 3.718 -0.346 O26 A1JM2 25 A1JM2 O28 O3 O 0 1 N N N N N N 19.379 45.021 21.340 3.145 2.944 -0.387 O28 A1JM2 26 A1JM2 S15 S1 S 0 1 N N N N N N 21.537 42.656 16.858 -2.071 0.210 1.407 S15 A1JM2 27 A1JM2 S24 S2 S 0 1 Y N N N N N 22.160 39.800 17.441 -4.146 0.382 -0.916 S24 A1JM2 28 A1JM2 H4 H1 H 0 1 N N N N N N 13.224 44.299 21.279 7.393 0.854 1.337 H4 A1JM2 29 A1JM2 H8 H2 H 0 1 N N N N N N 18.881 41.163 21.034 1.812 -1.669 -0.982 H8 A1JM2 30 A1JM2 H9 H3 H 0 1 N N N N N N 17.092 39.880 22.460 3.883 -3.196 -1.409 H9 A1JM2 31 A1JM2 H11 H4 H 0 1 N N N N N N 17.416 44.631 20.016 2.671 1.203 1.334 H11 A1JM2 32 A1JM2 H13 H5 H 0 1 N N N N N N 19.140 44.172 17.101 0.147 2.009 1.376 H13 A1JM2 33 A1JM2 H14A H6 H 0 0 N N N N N N 20.180 41.710 18.597 -1.851 1.991 -0.193 H14A A1JM2 34 A1JM2 H14B H7 H 0 0 N N N N N N 19.348 41.682 17.006 -1.258 0.444 -0.843 H14B A1JM2 35 A1JM2 H19 H8 H 0 1 N N N N N N 23.614 39.447 12.961 -7.017 -1.943 2.038 H19 A1JM2 36 A1JM2 H22 H9 H 0 1 N N N N N N 23.033 36.878 17.172 -6.809 0.008 -2.489 H22 A1JM2 37 A1JM2 H20 H10 H 0 1 N N N N N N 24.201 37.052 13.054 -8.949 -2.078 0.548 H20 A1JM2 38 A1JM2 H21 H11 H 0 1 N N N N N N 23.915 35.776 15.139 -8.853 -1.110 -1.714 H21 A1JM2 39 A1JM2 H25 H12 H 0 1 N N N N N N 21.101 44.087 19.041 0.317 2.143 -1.640 H25 A1JM2 40 A1JM2 H27 H13 H 0 1 N N N N N N 19.909 43.072 20.754 2.517 1.439 -1.677 H27 A1JM2 41 A1JM2 H1A H14 H 0 1 N N N N N N 13.078 40.608 23.457 6.349 -3.663 -1.183 H1A A1JM2 42 A1JM2 H1B H15 H 0 1 N N N N N N 14.138 39.643 22.674 7.884 -3.213 -0.669 H1B A1JM2 43 A1JM2 H26 H16 H 0 1 N N N N N N 20.476 46.291 19.419 1.113 4.304 -1.007 H26 A1JM2 44 A1JM2 H28 H17 H 0 1 N N N N N N 18.981 44.695 22.139 3.099 3.682 -1.010 H28 A1JM2 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JM2 N1 C2 SING N N 1 A1JM2 C2 N3 SING Y N 2 A1JM2 N3 C4 DOUB Y N 3 A1JM2 C4 N5 SING Y N 4 A1JM2 N5 C6 DOUB Y N 5 A1JM2 C6 N7 SING Y N 6 A1JM2 N7 C8 SING Y N 7 A1JM2 C8 C9 DOUB Y N 8 A1JM2 C9 C10 SING Y N 9 A1JM2 N7 C11 SING N N 10 A1JM2 C11 O12 SING N N 11 A1JM2 O12 C13 SING N N 12 A1JM2 C13 C14 SING N N 13 A1JM2 C14 S15 SING N N 14 A1JM2 S15 C16 SING N N 15 A1JM2 C16 N17 DOUB Y N 16 A1JM2 N17 C18 SING Y N 17 A1JM2 C18 C19 SING Y N 18 A1JM2 C19 C20 DOUB Y N 19 A1JM2 C20 C21 SING Y N 20 A1JM2 C21 C22 DOUB Y N 21 A1JM2 C22 C23 SING Y N 22 A1JM2 C23 S24 SING Y N 23 A1JM2 C13 C25 SING N N 24 A1JM2 C25 O26 SING N N 25 A1JM2 C25 C27 SING N N 26 A1JM2 C27 O28 SING N N 27 A1JM2 C10 C2 DOUB Y N 28 A1JM2 C27 C11 SING N N 29 A1JM2 C10 C6 SING Y N 30 A1JM2 S24 C16 SING Y N 31 A1JM2 C23 C18 DOUB Y N 32 A1JM2 C4 H4 SING N N 33 A1JM2 C8 H8 SING N N 34 A1JM2 C9 H9 SING N N 35 A1JM2 C11 H11 SING N N 36 A1JM2 C13 H13 SING N N 37 A1JM2 C14 H14A SING N N 38 A1JM2 C14 H14B SING N N 39 A1JM2 C19 H19 SING N N 40 A1JM2 C22 H22 SING N N 41 A1JM2 C20 H20 SING N N 42 A1JM2 C21 H21 SING N N 43 A1JM2 C25 H25 SING N N 44 A1JM2 C27 H27 SING N N 45 A1JM2 N1 H1A SING N N 46 A1JM2 N1 H1B SING N N 47 A1JM2 O26 H26 SING N N 48 A1JM2 O28 H28 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JM2 InChI InChI 1.06 "InChI=1S/C18H17N5O3S2/c19-15-9-5-6-23(16(9)21-8-20-15)17-14(25)13(24)11(26-17)7-27-18-22-10-3-1-2-4-12(10)28-18/h1-6,8,11,13-14,17,24-25H,7H2,(H2,19,20,21)/t11-,13-,14-,17-/m1/s1" A1JM2 InChIKey InChI 1.06 QDTKJDOQXHAGEV-LSCFUAHRSA-N A1JM2 SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(ccc12)[C@@H]3O[C@H](CSc4sc5ccccc5n4)[C@@H](O)[C@H]3O" A1JM2 SMILES CACTVS 3.385 "Nc1ncnc2n(ccc12)[CH]3O[CH](CSc4sc5ccccc5n4)[CH](O)[CH]3O" A1JM2 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc(s2)SC[C@@H]3[C@H]([C@H]([C@@H](O3)n4ccc5c4ncnc5N)O)O" A1JM2 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)nc(s2)SCC3C(C(C(O3)n4ccc5c4ncnc5N)O)O" # _pdbx_chem_comp_identifier.comp_id A1JM2 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{S})-2-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-5-(1,3-benzothiazol-2-ylsulfanylmethyl)oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JM2 "Create component" 2025-08-08 PDBE A1JM2 "Initial release" 2026-01-21 RCSB #