data_A1JMO # _chem_comp.id A1JMO _chem_comp.name "2-[3-[(4-dimethylphosphorylphenyl)amino]prop-1-ynyl]-~{N}-(1-methylpiperidin-4-yl)-1-[2,2,2-tris(fluoranyl)ethyl]indol-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H32 F3 N4 O P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-06 _chem_comp.pdbx_modified_date 2026-03-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 516.538 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JMO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9S9M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JMO C11 C1 C 0 1 N N N N N N 90.889 98.852 -44.377 6.878 -1.267 -0.288 C11 A1JMO 1 A1JMO C12 C2 C 0 1 N N N N N N 90.261 99.429 -45.634 7.215 -2.714 -0.655 C12 A1JMO 2 A1JMO C13 C3 C 0 1 N N N N N N 90.167 100.944 -45.537 8.733 -2.907 -0.604 C13 A1JMO 3 A1JMO C15 C4 C 0 1 N N N N N N 92.100 101.003 -44.037 8.951 -1.200 1.101 C15 A1JMO 4 A1JMO C16 C5 C 0 1 N N N N N N 92.242 99.492 -44.115 7.440 -0.956 1.102 C16 A1JMO 5 A1JMO C17 C6 C 0 1 N N N N N N 91.484 103.018 -45.315 10.653 -2.906 0.869 C17 A1JMO 6 A1JMO C18 C7 C 0 1 Y N N N N N 91.261 96.941 -42.161 5.695 1.265 -0.702 C18 A1JMO 7 A1JMO C19 C8 C 0 1 Y N N N N N 91.480 96.026 -41.135 5.148 2.523 -0.915 C19 A1JMO 8 A1JMO C2 C9 C 0 1 N N N N N N 93.583 91.610 -42.177 0.312 3.240 0.539 C2 A1JMO 9 A1JMO C20 C10 C 0 1 Y N N N N N 91.673 94.677 -41.403 3.783 2.707 -0.915 C20 A1JMO 10 A1JMO C21 C11 C 0 1 Y N N N N N 91.534 94.415 -44.985 2.349 -0.558 -0.296 C21 A1JMO 11 A1JMO C22 C12 C 0 1 Y N N N N N 91.806 93.111 -44.637 1.220 0.190 -0.403 C22 A1JMO 12 A1JMO C23 C13 C 0 1 N N N N N N 91.997 92.073 -45.595 -0.117 -0.308 -0.281 C23 A1JMO 13 A1JMO C24 C14 C 0 1 N N N N N N 92.218 91.244 -46.422 -1.213 -0.716 -0.181 C24 A1JMO 14 A1JMO C25 C15 C 0 1 N N N N N N 92.584 90.233 -47.423 -2.588 -1.228 -0.055 C25 A1JMO 15 A1JMO C27 C16 C 0 1 Y N N N N N 90.589 90.075 -48.895 -4.911 -0.369 -0.153 C27 A1JMO 16 A1JMO C28 C17 C 0 1 Y N N N N N 90.873 91.314 -49.464 -5.812 0.675 -0.319 C28 A1JMO 17 A1JMO C29 C18 C 0 1 Y N N N N N 89.994 91.883 -50.368 -7.170 0.430 -0.248 C29 A1JMO 18 A1JMO C30 C19 C 0 1 Y N N N N N 88.819 91.226 -50.721 -7.631 -0.851 -0.012 C30 A1JMO 19 A1JMO C32 C20 C 0 1 N N N N N N 88.046 91.228 -53.494 -9.762 -2.866 -0.485 C32 A1JMO 20 A1JMO C33 C21 C 0 1 N N N N N N 86.047 91.290 -51.468 -9.977 -0.975 1.804 C33 A1JMO 21 A1JMO C35 C22 C 0 1 Y N N N N N 88.540 89.990 -50.151 -6.737 -1.893 0.153 C35 A1JMO 22 A1JMO C36 C23 C 0 1 Y N N N N N 89.415 89.418 -49.247 -5.378 -1.655 0.083 C36 A1JMO 23 A1JMO C5 C24 C 0 1 N N N N N N 92.123 91.790 -42.486 0.609 2.603 -0.820 C5 A1JMO 24 A1JMO C7 C25 C 0 1 Y N N N N N 91.644 94.266 -42.730 2.932 1.626 -0.701 C7 A1JMO 25 A1JMO C8 C26 C 0 1 Y N N N N N 91.426 95.167 -43.779 3.479 0.348 -0.485 C8 A1JMO 26 A1JMO C9 C27 C 0 1 Y N N N N N 91.232 96.526 -43.492 4.872 0.173 -0.493 C9 A1JMO 27 A1JMO F1 F1 F 0 1 N N N N N N 94.340 91.693 -43.268 -0.237 2.279 1.394 F1 A1JMO 28 A1JMO F3 F2 F 0 1 N N N N N N 94.046 92.529 -41.333 1.498 3.733 1.092 F3 A1JMO 29 A1JMO F4 F3 F 0 1 N N N N N N 93.822 90.431 -41.624 -0.597 4.291 0.373 F4 A1JMO 30 A1JMO N10 N1 N 0 1 N N N N N N 91.034 97.412 -44.519 5.423 -1.090 -0.279 N10 A1JMO 31 A1JMO N14 N2 N 0 1 N N N N N N 91.523 101.527 -45.310 9.222 -2.599 0.745 N14 A1JMO 32 A1JMO N26 N3 N 0 1 N N N N N N 91.435 89.518 -47.955 -3.537 -0.126 -0.230 N26 A1JMO 33 A1JMO N6 N4 N 0 1 Y N N N N N 91.874 93.009 -43.263 1.561 1.504 -0.646 N6 A1JMO 34 A1JMO O34 O1 O 0 1 N N N N N N 87.721 93.424 -51.911 -10.133 -0.204 -0.783 O34 A1JMO 35 A1JMO P31 P1 P 0 1 N N N N N N 87.658 91.944 -51.900 -9.415 -1.168 0.081 P31 A1JMO 36 A1JMO H11 H1 H 0 1 N N N N N N 90.229 99.070 -43.525 7.322 -0.592 -1.020 H11 A1JMO 37 A1JMO H12A H2 H 0 0 N N N N N N 90.879 99.160 -46.503 6.739 -3.390 0.055 H12A A1JMO 38 A1JMO H12B H3 H 0 0 N N N N N N 89.251 99.011 -45.758 6.854 -2.928 -1.661 H12B A1JMO 39 A1JMO H13A H4 H 0 0 N N N N N N 89.751 101.344 -46.473 8.976 -3.941 -0.851 H13A A1JMO 40 A1JMO H13B H5 H 0 0 N N N N N N 89.509 101.215 -44.698 9.208 -2.241 -1.324 H13B A1JMO 41 A1JMO H15A H6 H 0 0 N N N N N N 93.090 101.454 -43.873 9.425 -0.542 0.373 H15A A1JMO 42 A1JMO H15B H7 H 0 0 N N N N N N 91.435 101.264 -43.201 9.353 -0.994 2.093 H15B A1JMO 43 A1JMO H16A H8 H 0 0 N N N N N N 92.931 99.233 -44.932 7.240 0.086 1.351 H16A A1JMO 44 A1JMO H16B H9 H 0 0 N N N N N N 92.644 99.115 -43.163 6.967 -1.605 1.839 H16B A1JMO 45 A1JMO H17A H10 H 0 0 N N N N N N 92.497 103.412 -45.145 11.216 -2.312 0.149 H17A A1JMO 46 A1JMO H17B H11 H 0 0 N N N N N N 91.111 103.372 -46.288 10.990 -2.668 1.878 H17B A1JMO 47 A1JMO H17C H12 H 0 0 N N N N N N 90.815 103.370 -44.516 10.816 -3.965 0.672 H17C A1JMO 48 A1JMO H18 H13 H 0 1 N N N N N N 91.112 97.984 -41.924 6.767 1.138 -0.705 H18 A1JMO 49 A1JMO H19 H14 H 0 1 N N N N N N 91.500 96.371 -40.112 5.801 3.367 -1.082 H19 A1JMO 50 A1JMO H20 H15 H 0 1 N N N N N N 91.840 93.969 -40.605 3.372 3.691 -1.081 H20 A1JMO 51 A1JMO H21 H16 H 0 1 N N N N N N 91.423 94.798 -45.989 2.401 -1.620 -0.107 H21 A1JMO 52 A1JMO H25A H17 H 0 0 N N N N N N 93.101 90.734 -48.255 -2.765 -1.985 -0.820 H25A A1JMO 53 A1JMO H25B H18 H 0 0 N N N N N N 93.263 89.506 -46.954 -2.722 -1.670 0.932 H25B A1JMO 54 A1JMO H28 H19 H 0 1 N N N N N N 91.783 91.832 -49.199 -5.452 1.676 -0.503 H28 A1JMO 55 A1JMO H29 H20 H 0 1 N N N N N N 90.221 92.845 -50.803 -7.871 1.241 -0.376 H29 A1JMO 56 A1JMO H32A H21 H 0 0 N N N N N N 87.363 91.634 -54.255 -9.233 -3.576 0.151 H32A A1JMO 57 A1JMO H32B H22 H 0 0 N N N N N N 89.084 91.474 -53.764 -10.833 -3.056 -0.429 H32B A1JMO 58 A1JMO H32C H23 H 0 0 N N N N N N 87.930 90.135 -53.443 -9.426 -2.981 -1.515 H32C A1JMO 59 A1JMO H33A H24 H 0 0 N N N N N N 85.290 91.694 -52.156 -9.770 0.040 2.143 H33A A1JMO 60 A1JMO H33B H25 H 0 0 N N N N N N 86.064 90.193 -51.545 -11.049 -1.165 1.860 H33B A1JMO 61 A1JMO H33C H26 H 0 0 N N N N N N 85.798 91.581 -50.437 -9.449 -1.685 2.441 H33C A1JMO 62 A1JMO H35 H27 H 0 1 N N N N N N 87.631 89.471 -50.417 -7.101 -2.893 0.338 H35 A1JMO 63 A1JMO H36 H28 H 0 1 N N N N N N 89.186 88.456 -48.812 -4.680 -2.469 0.212 H36 A1JMO 64 A1JMO H5A H29 H 0 1 N N N N N N 91.772 90.922 -43.064 -0.315 2.219 -1.251 H5A A1JMO 65 A1JMO H5B H30 H 0 1 N N N N N N 91.564 91.851 -41.540 1.037 3.352 -1.486 H5B A1JMO 66 A1JMO H10 H31 H 0 1 N N N N N N 91.814 97.284 -45.132 4.843 -1.852 -0.124 H10 A1JMO 67 A1JMO H26 H33 H 0 1 N N N N N N 91.794 88.680 -48.365 -3.212 0.772 -0.400 H26 A1JMO 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JMO F1 C2 SING N N 1 A1JMO C2 F3 SING N N 2 A1JMO C2 F4 SING N N 3 A1JMO C2 C5 SING N N 4 A1JMO C5 N6 SING N N 5 A1JMO N6 C7 SING Y N 6 A1JMO C7 C8 DOUB Y N 7 A1JMO C8 C9 SING Y N 8 A1JMO C9 N10 SING N N 9 A1JMO N10 C11 SING N N 10 A1JMO C11 C12 SING N N 11 A1JMO C12 C13 SING N N 12 A1JMO C13 N14 SING N N 13 A1JMO N14 C15 SING N N 14 A1JMO C15 C16 SING N N 15 A1JMO N14 C17 SING N N 16 A1JMO C9 C18 DOUB Y N 17 A1JMO C18 C19 SING Y N 18 A1JMO C19 C20 DOUB Y N 19 A1JMO C8 C21 SING Y N 20 A1JMO C21 C22 DOUB Y N 21 A1JMO C22 C23 SING N N 22 A1JMO C23 C24 TRIP N N 23 A1JMO C24 C25 SING N N 24 A1JMO C25 N26 SING N N 25 A1JMO N26 C27 SING N N 26 A1JMO C27 C28 DOUB Y N 27 A1JMO C28 C29 SING Y N 28 A1JMO C29 C30 DOUB Y N 29 A1JMO C30 P31 SING N N 30 A1JMO P31 C32 SING N N 31 A1JMO P31 C33 SING N N 32 A1JMO P31 O34 DOUB N N 33 A1JMO C30 C35 SING Y N 34 A1JMO C35 C36 DOUB Y N 35 A1JMO C22 N6 SING Y N 36 A1JMO C20 C7 SING Y N 37 A1JMO C16 C11 SING N N 38 A1JMO C36 C27 SING Y N 39 A1JMO C11 H11 SING N N 40 A1JMO C12 H12A SING N N 41 A1JMO C12 H12B SING N N 42 A1JMO C13 H13A SING N N 43 A1JMO C13 H13B SING N N 44 A1JMO C15 H15A SING N N 45 A1JMO C15 H15B SING N N 46 A1JMO C16 H16A SING N N 47 A1JMO C16 H16B SING N N 48 A1JMO C17 H17A SING N N 49 A1JMO C17 H17B SING N N 50 A1JMO C17 H17C SING N N 51 A1JMO C18 H18 SING N N 52 A1JMO C19 H19 SING N N 53 A1JMO C20 H20 SING N N 54 A1JMO C21 H21 SING N N 55 A1JMO C25 H25A SING N N 56 A1JMO C25 H25B SING N N 57 A1JMO C28 H28 SING N N 58 A1JMO C29 H29 SING N N 59 A1JMO C32 H32A SING N N 60 A1JMO C32 H32B SING N N 61 A1JMO C32 H32C SING N N 62 A1JMO C33 H33A SING N N 63 A1JMO C33 H33B SING N N 64 A1JMO C33 H33C SING N N 65 A1JMO C35 H35 SING N N 66 A1JMO C36 H36 SING N N 67 A1JMO C5 H5A SING N N 68 A1JMO C5 H5B SING N N 69 A1JMO N10 H10 SING N N 70 A1JMO N26 H26 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JMO InChI InChI 1.06 "InChI=1S/C27H32F3N4OP/c1-33-16-13-21(14-17-33)32-25-7-4-8-26-24(25)18-22(34(26)19-27(28,29)30)6-5-15-31-20-9-11-23(12-10-20)36(2,3)35/h4,7-12,18,21,31-32H,13-17,19H2,1-3H3" A1JMO InChIKey InChI 1.06 TWHPNHHZQSJOEI-UHFFFAOYSA-N A1JMO SMILES_CANONICAL CACTVS 3.385 "CN1CCC(CC1)Nc2cccc3n(CC(F)(F)F)c(cc23)C#CCNc4ccc(cc4)[P](C)(C)=O" A1JMO SMILES CACTVS 3.385 "CN1CCC(CC1)Nc2cccc3n(CC(F)(F)F)c(cc23)C#CCNc4ccc(cc4)[P](C)(C)=O" A1JMO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1CCC(CC1)Nc2cccc3c2cc(n3CC(F)(F)F)C#CCNc4ccc(cc4)P(=O)(C)C" A1JMO SMILES "OpenEye OEToolkits" 2.0.7 "CN1CCC(CC1)Nc2cccc3c2cc(n3CC(F)(F)F)C#CCNc4ccc(cc4)P(=O)(C)C" # _pdbx_chem_comp_identifier.comp_id A1JMO _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[3-[(4-dimethylphosphorylphenyl)amino]prop-1-ynyl]-~{N}-(1-methylpiperidin-4-yl)-1-[2,2,2-tris(fluoranyl)ethyl]indol-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JMO "Create component" 2025-08-06 PDBE A1JMO "Initial release" 2026-03-11 RCSB #