data_A1JNG # _chem_comp.id A1JNG _chem_comp.name "1-[2-[4-(4-oxidanylidene-3,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)-1,2,3-triazol-1-yl]ethyl]guanidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H13 N9 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-19 _chem_comp.pdbx_modified_date 2025-12-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.281 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JNG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SDW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JNG N1 N1 N 0 1 N N N N N N -4.912 15.214 48.637 -4.642 1.787 -0.074 N1 A1JNG 1 A1JNG N3 N2 N 0 1 Y N N N N N -3.721 18.575 46.825 -3.683 -2.145 -0.520 N3 A1JNG 2 A1JNG C4 C1 C 0 1 Y N N N N N -2.365 18.520 46.965 -2.338 -2.146 -0.267 C4 A1JNG 3 A1JNG C5 C2 C 0 1 Y N N N N N -1.998 17.382 47.634 -1.930 -0.883 0.011 C5 A1JNG 4 A1JNG C6 C3 C 0 1 Y N N N N N -0.624 17.014 47.950 -0.550 -0.447 0.341 C6 A1JNG 5 A1JNG C7 C4 C 0 1 N N N N N N 2.264 15.218 49.156 2.978 -0.809 0.945 C7 A1JNG 6 A1JNG C8 C5 C 0 1 N N N N N N 2.201 15.194 50.668 3.882 0.021 0.032 C8 A1JNG 7 A1JNG C10 C6 C 0 1 Y N N N N N -0.102 15.910 48.580 0.562 -1.235 0.420 C10 A1JNG 8 A1JNG C1 C7 C 0 1 N N N N N N -3.547 15.462 48.605 -3.374 1.345 0.094 C1 A1JNG 9 A1JNG C11 C8 C 0 1 Y N N N N N -3.210 16.683 47.937 -3.122 -0.034 -0.078 C11 A1JNG 10 A1JNG C2 C9 C 0 1 N N N N N N -5.839 16.046 48.088 -5.631 0.916 -0.399 C2 A1JNG 11 A1JNG C3 C10 C 0 1 Y N N N N N -4.268 17.470 47.404 -4.185 -0.881 -0.413 C3 A1JNG 12 A1JNG C9 C11 C 0 1 N N N N N N 1.617 16.860 52.386 6.277 0.234 -0.487 C9 A1JNG 13 A1JNG N2 N3 N 0 1 N N N N N N -5.575 17.169 47.469 -5.413 -0.357 -0.566 N2 A1JNG 14 A1JNG N4 N4 N 0 1 Y N N N N N 0.424 17.819 47.607 -0.143 0.805 0.616 N4 A1JNG 15 A1JNG N5 N5 N 0 1 Y N N N N N 1.543 17.255 48.008 1.122 0.788 0.852 N5 A1JNG 16 A1JNG N6 N6 N 0 1 Y N N N N N 1.225 16.082 48.591 1.583 -0.409 0.746 N6 A1JNG 17 A1JNG N7 N7 N 0 1 N N N N N N 2.127 16.544 51.203 5.277 -0.379 0.230 N7 A1JNG 18 A1JNG N8 N8 N 0 1 N N N N N N 1.567 18.126 52.768 7.518 -0.122 -0.310 N8 A1JNG 19 A1JNG N9 N9 N 0 1 N N N N N N 1.157 15.908 53.179 5.968 1.222 -1.392 N9 A1JNG 20 A1JNG O1 O1 O 0 1 N N N N N N -2.766 14.654 49.129 -2.476 2.116 0.386 O1 A1JNG 21 A1JNG H1 H1 H 0 1 N N N N N N -5.231 14.380 49.087 -4.845 2.728 0.042 H1 A1JNG 22 A1JNG H3 H2 H 0 1 N N N N N N -4.230 19.307 46.372 -4.206 -2.931 -0.743 H3 A1JNG 23 A1JNG H4 H3 H 0 1 N N N N N N -1.677 19.268 46.600 -1.701 -3.018 -0.286 H4 A1JNG 24 A1JNG H5 H4 H 0 1 N N N N N N 2.125 14.195 48.776 3.091 -1.866 0.704 H5 A1JNG 25 A1JNG H6 H5 H 0 1 N N N N N N 3.250 15.594 48.845 3.260 -0.641 1.985 H6 A1JNG 26 A1JNG H7 H6 H 0 1 N N N N N N 1.309 14.632 50.983 3.601 -0.146 -1.008 H7 A1JNG 27 A1JNG H8 H7 H 0 1 N N N N N N 3.103 14.700 51.059 3.770 1.079 0.273 H8 A1JNG 28 A1JNG H14 H8 H 0 1 N N N N N N -0.652 15.073 48.984 0.615 -2.301 0.256 H14 A1JNG 29 A1JNG H2 H9 H 0 1 N N N N N N -6.876 15.756 48.170 -6.636 1.293 -0.524 H2 A1JNG 30 A1JNG H9 H10 H 0 1 N N N N N N 2.486 17.287 50.639 5.496 -1.076 0.868 H9 A1JNG 31 A1JNG H10 H11 H 0 1 N N N N N N 1.159 18.228 53.675 8.224 0.310 -0.817 H10 A1JNG 32 A1JNG H12 H12 H 0 1 N N N N N N 0.770 16.143 54.070 6.673 1.654 -1.898 H12 A1JNG 33 A1JNG H13 H13 H 0 1 N N N N N N 1.196 14.952 52.888 5.044 1.487 -1.523 H13 A1JNG 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JNG O1 C1 DOUB N N 1 A1JNG C1 N1 SING N N 2 A1JNG N1 C2 SING N N 3 A1JNG C2 N2 DOUB N N 4 A1JNG N2 C3 SING N N 5 A1JNG C3 N3 SING Y N 6 A1JNG N3 C4 SING Y N 7 A1JNG C4 C5 DOUB Y N 8 A1JNG C5 C6 SING N N 9 A1JNG C6 N4 SING Y N 10 A1JNG N4 N5 DOUB Y N 11 A1JNG N5 N6 SING Y N 12 A1JNG N6 C7 SING N N 13 A1JNG C7 C8 SING N N 14 A1JNG C8 N7 SING N N 15 A1JNG N7 C9 SING N N 16 A1JNG C9 N8 DOUB N N 17 A1JNG C9 N9 SING N N 18 A1JNG N6 C10 SING Y N 19 A1JNG C5 C11 SING Y N 20 A1JNG C1 C11 SING N N 21 A1JNG C3 C11 DOUB Y N 22 A1JNG C6 C10 DOUB Y N 23 A1JNG N1 H1 SING N N 24 A1JNG N3 H3 SING N N 25 A1JNG C4 H4 SING N N 26 A1JNG C7 H5 SING N N 27 A1JNG C7 H6 SING N N 28 A1JNG C8 H7 SING N N 29 A1JNG C8 H8 SING N N 30 A1JNG C10 H14 SING N N 31 A1JNG C2 H2 SING N N 32 A1JNG N7 H9 SING N N 33 A1JNG N8 H10 SING N N 34 A1JNG N9 H12 SING N N 35 A1JNG N9 H13 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JNG InChI InChI 1.06 "InChI=1S/C11H13N9O/c12-11(13)14-1-2-20-4-7(18-19-20)6-3-15-9-8(6)10(21)17-5-16-9/h3-5H,1-2H2,(H4,12,13,14)(H2,15,16,17,21)" A1JNG InChIKey InChI 1.06 XNDGGOMEAZTNJB-UHFFFAOYSA-N A1JNG SMILES_CANONICAL CACTVS 3.385 "NC(=N)NCCn1cc(nn1)c2c[nH]c3N=CNC(=O)c23" A1JNG SMILES CACTVS 3.385 "NC(=N)NCCn1cc(nn1)c2c[nH]c3N=CNC(=O)c23" A1JNG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NCCn1cc(nn1)c2c[nH]c3c2C(=O)NC=N3" A1JNG SMILES "OpenEye OEToolkits" 2.0.7 "c1c(c2c([nH]1)N=CNC2=O)c3cn(nn3)CCNC(=N)N" # _pdbx_chem_comp_identifier.comp_id A1JNG _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[2-[4-(4-oxidanylidene-3,7-dihydropyrrolo[2,3-d]pyrimidin-5-yl)-1,2,3-triazol-1-yl]ethyl]guanidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JNG "Create component" 2025-08-19 PDBE A1JNG "Initial release" 2025-12-17 RCSB #