data_A1JNS # _chem_comp.id A1JNS _chem_comp.name "(2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[[1-[(3-fluorophenyl)methyl]-1,2,3-triazol-4-yl]methyl]amino]-2-azanyl-butanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 F N10 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-08-26 _chem_comp.pdbx_modified_date 2026-08-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 556.549 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JNS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SH7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JNS C32 C1 C 0 1 Y N N N N N 0.020 45.847 1.576 -6.884 0.851 0.935 C32 A1JNS 1 A1JNS C33 C2 C 0 1 Y N N N N N 0.207 46.401 2.838 -7.455 -0.393 1.125 C33 A1JNS 2 A1JNS C36 C3 C 0 1 Y N N N N N 2.104 44.960 3.211 -9.410 0.325 -0.064 C36 A1JNS 3 A1JNS C37 C4 C 0 1 Y N N N N N 1.919 44.412 1.954 -8.832 1.565 -0.262 C37 A1JNS 4 A1JNS C12 C5 C 0 1 N N R N N N 0.205 41.420 6.092 3.676 1.245 0.371 C12 A1JNS 5 A1JNS C13 C6 C 0 1 N N R N N N 0.605 42.777 5.540 3.997 2.553 -0.396 C13 A1JNS 6 A1JNS N N1 N 0 1 N N N N N N -7.697 43.157 7.075 -0.553 -3.078 -2.063 N A1JNS 7 A1JNS CA C7 C 0 1 N N S N N N -6.672 44.107 7.516 -0.120 -2.695 -0.712 CA A1JNS 8 A1JNS C C8 C 0 1 N N N N N N -7.476 45.214 8.169 -0.685 -3.668 0.291 C A1JNS 9 A1JNS O O1 O 0 1 N N N N N N -8.728 45.031 8.189 -1.640 -4.348 0.001 O A1JNS 10 A1JNS CB C9 C 0 1 N N N N N N -5.842 44.452 6.283 -0.623 -1.286 -0.396 CB A1JNS 11 A1JNS OXT O2 O 0 1 N N N N N N -6.850 46.150 8.669 -0.126 -3.778 1.507 OXT A1JNS 12 A1JNS C10 C10 C 0 1 N N R N N N -1.791 42.528 5.798 1.607 2.140 -0.160 C10 A1JNS 13 A1JNS C15 C11 C 0 1 N N S N N N -0.695 43.585 5.660 2.625 3.270 -0.404 C15 A1JNS 14 A1JNS C18 C12 C 0 1 Y N N N N N 1.487 40.141 4.305 4.442 -0.768 -0.943 C18 A1JNS 15 A1JNS C20 C13 C 0 1 Y N N N N N 2.187 38.461 5.396 6.403 -1.131 -0.094 C20 A1JNS 16 A1JNS C21 C14 C 0 1 Y N N N N N 1.461 39.226 6.285 5.860 -0.018 0.570 C21 A1JNS 17 A1JNS C23 C15 C 0 1 Y N N N N N 1.790 37.793 7.921 7.764 0.128 1.848 C23 A1JNS 18 A1JNS C25 C16 C 0 1 Y N N N N N 2.747 37.270 5.882 7.683 -1.570 0.287 C25 A1JNS 19 A1JNS C27 C17 C 0 1 N N N N N N -4.658 43.835 3.547 -1.671 1.377 -1.734 C27 A1JNS 20 A1JNS C28 C18 C 0 1 Y N N N N N -3.728 44.258 2.511 -2.845 0.902 -0.918 C28 A1JNS 21 A1JNS C29 C19 C 0 1 Y N N N N N -3.083 45.444 2.359 -3.547 1.623 -0.013 C29 A1JNS 22 A1JNS C31 C20 C 0 1 N N N N N N -1.234 46.156 0.796 -5.508 1.139 1.478 C31 A1JNS 23 A1JNS C34 C21 C 0 1 Y N N N N N 1.239 45.937 3.617 -8.719 -0.658 0.625 C34 A1JNS 24 A1JNS C38 C22 C 0 1 Y N N N N N 0.888 44.855 1.142 -7.572 1.830 0.242 C38 A1JNS 25 A1JNS C7 C23 C 0 1 N N N N N N -4.698 43.411 6.018 0.047 -0.282 -1.336 C7 A1JNS 26 A1JNS C9 C24 C 0 1 N N N N N N -2.856 42.538 4.721 0.611 2.073 -1.320 C9 A1JNS 27 A1JNS F35 F1 F 0 1 N N N N N N 1.363 46.432 4.877 -9.278 -1.873 0.810 F35 A1JNS 28 A1JNS N17 N2 N 0 1 Y N N N N N 1.010 40.313 5.577 4.624 0.189 0.010 N17 A1JNS 29 A1JNS N19 N3 N 0 1 Y N N N N N 2.197 39.053 4.135 5.485 -1.543 -1.000 N19 A1JNS 30 A1JNS N22 N4 N 0 1 Y N N N N N 1.224 38.944 7.562 6.569 0.574 1.525 N22 A1JNS 31 A1JNS N24 N5 N 0 1 Y N N N N N 2.518 36.956 7.177 8.316 -0.914 1.253 N24 A1JNS 32 A1JNS N26 N6 N 0 1 N N N N N N 3.533 36.478 5.154 8.270 -2.661 -0.331 N26 A1JNS 33 A1JNS N30 N7 N 0 1 Y N N N N N -2.293 45.280 1.283 -4.503 0.795 0.469 N30 A1JNS 34 A1JNS N39 N8 N 0 1 Y N N N N N -2.438 44.048 0.779 -4.378 -0.347 -0.112 N39 A1JNS 35 A1JNS N40 N9 N 0 1 Y N N N N N -3.312 43.415 1.524 -3.401 -0.314 -0.949 N40 A1JNS 36 A1JNS N8 N10 N 0 1 N N N N N N -3.851 43.666 4.801 -0.423 1.074 -1.020 N8 A1JNS 37 A1JNS O11 O3 O 0 1 N N N N N N -1.139 41.244 5.692 2.345 0.910 -0.078 O11 A1JNS 38 A1JNS O14 O4 O 0 1 N N N N N N 1.631 43.392 6.311 4.973 3.328 0.303 O14 A1JNS 39 A1JNS O16 O5 O 0 1 N N N N N N -0.742 44.391 6.831 2.560 4.237 0.646 O16 A1JNS 40 A1JNS H33 H1 H 0 1 N N N N N N -0.447 47.181 3.199 -6.915 -1.159 1.662 H33 A1JNS 41 A1JNS H36 H2 H 0 1 N N N N N N 2.907 44.626 3.851 -10.394 0.118 -0.457 H36 A1JNS 42 A1JNS H37 H3 H 0 1 N N N N N N 2.582 43.635 1.604 -9.366 2.327 -0.810 H37 A1JNS 43 A1JNS H12 H4 H 0 1 N N N N N N 0.276 41.448 7.189 3.687 1.419 1.447 H12 A1JNS 44 A1JNS H13 H5 H 0 1 N N N N N N 0.893 42.686 4.482 4.329 2.337 -1.412 H13 A1JNS 45 A1JNS H H6 H 0 1 N N N N N N -8.270 42.899 7.853 -1.559 -3.070 -2.136 H A1JNS 46 A1JNS H3 H7 H 0 1 N N N N N N -8.264 43.582 6.370 -0.135 -2.480 -2.760 H3 A1JNS 47 A1JNS HA H9 H 0 1 N N N N N N -6.022 43.637 8.269 0.969 -2.712 -0.662 HA A1JNS 48 A1JNS HB3 H10 H 0 1 N N N N N N -6.506 44.477 5.406 -1.704 -1.246 -0.533 HB3 A1JNS 49 A1JNS HB2 H11 H 0 1 N N N N N N -5.389 45.444 6.429 -0.379 -1.036 0.637 HB2 A1JNS 50 A1JNS H1 H12 H 0 1 N N N N N N -7.456 46.747 9.092 -0.524 -4.415 2.116 H1 A1JNS 51 A1JNS H10 H13 H 0 1 N N N N N N -2.269 42.632 6.783 1.075 2.316 0.775 H10 A1JNS 52 A1JNS H15 H14 H 0 1 N N N N N N -0.855 44.180 4.749 2.448 3.744 -1.369 H15 A1JNS 53 A1JNS H18 H15 H 0 1 N N N N N N 1.294 40.844 3.508 3.559 -0.870 -1.558 H18 A1JNS 54 A1JNS H23 H16 H 0 1 N N N N N N 1.641 37.498 8.949 8.314 0.632 2.629 H23 A1JNS 55 A1JNS H27B H17 H 0 0 N N N N N N -5.130 42.882 3.268 -1.670 0.870 -2.699 H27B A1JNS 56 A1JNS H27A H18 H 0 0 N N N N N N -5.435 44.599 3.695 -1.748 2.453 -1.889 H27A A1JNS 57 A1JNS H29 H19 H 0 1 N N N N N N -3.183 46.328 2.971 -3.379 2.652 0.268 H29 A1JNS 58 A1JNS H31A H20 H 0 0 N N N N N N -1.062 45.974 -0.275 -5.429 2.198 1.723 H31A A1JNS 59 A1JNS H31B H21 H 0 0 N N N N N N -1.519 47.207 0.948 -5.340 0.544 2.375 H31B A1JNS 60 A1JNS H38 H22 H 0 1 N N N N N N 0.758 44.424 0.160 -7.122 2.799 0.087 H38 A1JNS 61 A1JNS H7B H23 H 0 1 N N N N N N -4.035 43.407 6.896 1.129 -0.330 -1.207 H7B A1JNS 62 A1JNS H7A H24 H 0 1 N N N N N N -5.163 42.420 5.905 -0.207 -0.524 -2.367 H7A A1JNS 63 A1JNS H9B H25 H 0 1 N N N N N N -3.412 41.591 4.786 0.145 3.049 -1.455 H9B A1JNS 64 A1JNS H9A H26 H 0 1 N N N N N N -2.351 42.601 3.746 1.135 1.791 -2.233 H9A A1JNS 65 A1JNS H26A H27 H 0 0 N N N N N N 3.856 35.718 5.718 7.797 -3.132 -1.035 H26A A1JNS 66 A1JNS H26B H28 H 0 0 N N N N N N 3.016 36.119 4.376 9.154 -2.954 -0.060 H26B A1JNS 67 A1JNS H14 H30 H 0 1 N N N N N N 1.850 44.235 5.932 5.208 4.156 -0.138 H14 A1JNS 68 A1JNS H16 H31 H 0 1 N N N N N N -1.564 44.867 6.855 3.220 4.941 0.574 H16 A1JNS 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JNS N CA SING N N 1 A1JNS CA CB SING N N 2 A1JNS CB C7 SING N N 3 A1JNS C7 N8 SING N N 4 A1JNS N8 C9 SING N N 5 A1JNS C9 C10 SING N N 6 A1JNS C10 O11 SING N N 7 A1JNS O11 C12 SING N N 8 A1JNS C12 C13 SING N N 9 A1JNS C13 O14 SING N N 10 A1JNS C13 C15 SING N N 11 A1JNS C15 O16 SING N N 12 A1JNS C12 N17 SING N N 13 A1JNS N17 C18 SING Y N 14 A1JNS C18 N19 DOUB Y N 15 A1JNS N19 C20 SING Y N 16 A1JNS C20 C21 DOUB Y N 17 A1JNS C21 N22 SING Y N 18 A1JNS N22 C23 DOUB Y N 19 A1JNS C23 N24 SING Y N 20 A1JNS N24 C25 DOUB Y N 21 A1JNS C25 N26 SING N N 22 A1JNS N8 C27 SING N N 23 A1JNS C27 C28 SING N N 24 A1JNS C28 C29 DOUB Y N 25 A1JNS C29 N30 SING Y N 26 A1JNS N30 C31 SING N N 27 A1JNS C31 C32 SING N N 28 A1JNS C32 C33 DOUB Y N 29 A1JNS C33 C34 SING Y N 30 A1JNS C34 F35 SING N N 31 A1JNS C34 C36 DOUB Y N 32 A1JNS C36 C37 SING Y N 33 A1JNS C37 C38 DOUB Y N 34 A1JNS N30 N39 SING Y N 35 A1JNS N39 N40 DOUB Y N 36 A1JNS CA C SING N N 37 A1JNS C OXT SING N N 38 A1JNS C O DOUB N N 39 A1JNS C15 C10 SING N N 40 A1JNS C21 N17 SING Y N 41 A1JNS N40 C28 SING Y N 42 A1JNS C25 C20 SING Y N 43 A1JNS C38 C32 SING Y N 44 A1JNS C33 H33 SING N N 45 A1JNS C36 H36 SING N N 46 A1JNS C37 H37 SING N N 47 A1JNS C12 H12 SING N N 48 A1JNS C13 H13 SING N N 49 A1JNS N H SING N N 50 A1JNS N H3 SING N N 51 A1JNS CA HA SING N N 52 A1JNS CB HB3 SING N N 53 A1JNS CB HB2 SING N N 54 A1JNS OXT H1 SING N N 55 A1JNS C10 H10 SING N N 56 A1JNS C15 H15 SING N N 57 A1JNS C18 H18 SING N N 58 A1JNS C23 H23 SING N N 59 A1JNS C27 H27B SING N N 60 A1JNS C27 H27A SING N N 61 A1JNS C29 H29 SING N N 62 A1JNS C31 H31A SING N N 63 A1JNS C31 H31B SING N N 64 A1JNS C38 H38 SING N N 65 A1JNS C7 H7B SING N N 66 A1JNS C7 H7A SING N N 67 A1JNS C9 H9B SING N N 68 A1JNS C9 H9A SING N N 69 A1JNS N26 H26A SING N N 70 A1JNS N26 H26B SING N N 71 A1JNS O14 H14 SING N N 72 A1JNS O16 H16 SING N N 73 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JNS InChI InChI 1.06 "InChI=1S/C24H29FN10O5/c25-14-3-1-2-13(6-14)7-34-9-15(31-32-34)8-33(5-4-16(26)24(38)39)10-17-19(36)20(37)23(40-17)35-12-30-18-21(27)28-11-29-22(18)35/h1-3,6,9,11-12,16-17,19-20,23,36-37H,4-5,7-8,10,26H2,(H,38,39)(H2,27,28,29)/t16-,17+,19+,20+,23+/m0/s1" A1JNS InChIKey InChI 1.06 XQJBERQHZDERSM-GMDRLUGNSA-N A1JNS SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CCN(C[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)Cc4cn(Cc5cccc(F)c5)nn4)C(O)=O" A1JNS SMILES CACTVS 3.385 "N[CH](CCN(C[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)Cc4cn(Cc5cccc(F)c5)nn4)C(O)=O" A1JNS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)Cn2cc(nn2)CN(CC[C@@H](C(=O)O)N)C[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)O)O" A1JNS SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)F)Cn2cc(nn2)CN(CCC(C(=O)O)N)CC3C(C(C(O3)n4cnc5c4ncnc5N)O)O" # _pdbx_chem_comp_identifier.comp_id A1JNS _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-4-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-[[1-[(3-fluorophenyl)methyl]-1,2,3-triazol-4-yl]methyl]amino]-2-azanyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JNS "Create component" 2025-08-26 PDBE A1JNS "Initial release" 2026-09-02 RCSB #