data_A1JOL # _chem_comp.id A1JOL _chem_comp.name "(4~{R})-4-[(3~{S},5~{R},6~{R},8~{S},9~{S},10~{R},13~{R},14~{S},17~{R})-6-[2-(1~{H}-imidazol-4-yl)ethylamino]-10,13-dimethyl-3,5-bis(oxidanyl)-1,2,3,4,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]pentanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H47 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-05 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.701 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JOL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SLX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JOL N1 N1 N 0 1 Y N N N N N 27.113 3.189 16.953 5.918 5.334 0.237 N1 A1JOL 1 A1JOL C7 C1 C 0 1 N N N N N N 31.419 4.041 16.310 3.545 1.554 -0.417 C7 A1JOL 2 A1JOL C8 C2 C 0 1 N N N N N N 30.718 2.739 16.557 3.648 2.527 0.759 C8 A1JOL 3 A1JOL N2 N2 N 0 1 Y N N N N N 28.936 3.537 18.147 6.046 3.180 0.240 N2 A1JOL 4 A1JOL C9 C3 C 0 1 Y N N N N N 29.291 3.006 16.916 4.772 3.500 0.510 C9 A1JOL 5 A1JOL O1 O1 O 0 1 N N N N N N 42.963 5.095 12.404 -9.049 2.379 1.142 O1 A1JOL 6 A1JOL C1 C4 C 0 1 N N N N N N 32.283 7.211 21.633 3.278 -3.609 1.392 C1 A1JOL 7 A1JOL C5 C5 C 0 1 N N R N N N 32.078 6.983 18.686 2.596 -1.763 -0.779 C5 A1JOL 8 A1JOL C6 C6 C 0 1 N N R N N N 31.878 6.252 17.328 2.320 -0.346 -1.286 C6 A1JOL 9 A1JOL C4 C7 C 0 1 N N N N N N 33.236 4.982 19.859 1.711 -1.134 1.472 C4 A1JOL 10 A1JOL C3 C8 C 0 1 N N R N N N 33.372 6.459 19.428 1.584 -2.122 0.311 C3 A1JOL 11 A1JOL O3 O2 O 0 1 N N N N N N 32.257 8.388 18.393 2.478 -2.687 -1.862 O3 A1JOL 12 A1JOL C2 C9 C 0 1 N N N N N N 33.520 7.289 20.724 1.862 -3.540 0.816 C2 A1JOL 13 A1JOL O2 O3 O 0 1 N N N N N N 41.094 3.978 11.962 -8.377 1.626 -0.824 O2 A1JOL 14 A1JOL C27 C10 C 0 1 N N N N N N 41.781 4.632 12.719 -8.154 1.760 0.356 C27 A1JOL 15 A1JOL C26 C11 C 0 1 N N N N N N 41.393 4.944 14.137 -6.872 1.233 0.946 C26 A1JOL 16 A1JOL C25 C12 C 0 1 N N N N N N 39.963 5.469 14.272 -6.036 0.578 -0.156 C25 A1JOL 17 A1JOL C23 C13 C 0 1 N N R N N N 39.282 5.227 15.636 -4.733 0.042 0.443 C23 A1JOL 18 A1JOL C24 C14 C 0 1 N N N N N N 40.173 5.737 16.771 -5.051 -1.081 1.432 C24 A1JOL 19 A1JOL C22 C15 C 0 1 N N R N N N 37.862 5.838 15.647 -3.843 -0.501 -0.677 C22 A1JOL 20 A1JOL C17 C16 C 0 1 N N R N N N 36.919 5.542 16.844 -2.474 -0.884 -0.124 C17 A1JOL 21 A1JOL C18 C17 C 0 1 N N N N N N 36.897 4.041 17.195 -2.118 0.027 1.053 C18 A1JOL 22 A1JOL C16 C18 C 0 1 N N N N N N 37.128 6.380 18.131 -2.286 -2.334 0.276 C16 A1JOL 23 A1JOL C15 C19 C 0 1 N N N N N N 35.954 6.294 19.121 -0.845 -2.484 0.790 C15 A1JOL 24 A1JOL C14 C20 C 0 1 N N S N N N 34.596 6.625 18.468 0.169 -2.054 -0.265 C14 A1JOL 25 A1JOL C21 C21 C 0 1 N N N N N N 37.050 5.373 14.415 -3.566 0.605 -1.726 C21 A1JOL 26 A1JOL C20 C22 C 0 1 N N N N N N 35.569 5.357 14.831 -2.022 0.758 -1.804 C20 A1JOL 27 A1JOL C19 C23 C 0 1 N N S N N N 35.583 6.012 16.218 -1.517 -0.603 -1.314 C19 A1JOL 28 A1JOL C13 C24 C 0 1 N N S N N N 34.367 5.864 17.137 -0.105 -0.626 -0.761 C13 A1JOL 29 A1JOL C12 C25 C 0 1 N N N N N N 33.116 6.380 16.425 0.903 -0.273 -1.857 C12 A1JOL 30 A1JOL C28 C26 C 0 1 N N N N N N 30.833 6.909 19.603 4.012 -1.832 -0.203 C28 A1JOL 31 A1JOL C C27 C 0 1 N N S N N N 31.028 7.670 20.909 4.289 -3.249 0.302 C A1JOL 32 A1JOL O O4 O 0 1 N N N N N N 29.870 7.472 21.726 5.612 -3.314 0.839 O A1JOL 33 A1JOL N N3 N 0 1 N N N N N N 31.386 4.882 17.512 2.450 0.606 -0.174 N A1JOL 34 A1JOL C11 C28 C 0 1 Y N N N N N 27.614 3.626 18.115 6.740 4.273 0.081 C11 A1JOL 35 A1JOL C10 C29 C 0 1 Y N N N N N 28.166 2.793 16.180 4.670 4.842 0.509 C10 A1JOL 36 A1JOL H18 H1 H 0 1 N N N N N N 26.146 3.158 16.698 6.168 6.269 0.172 H18 A1JOL 37 A1JOL H13 H2 H 0 1 N N N N N N 30.919 4.570 15.485 3.346 2.111 -1.333 H13 A1JOL 38 A1JOL H14 H3 H 0 1 N N N N N N 32.466 3.842 16.037 4.482 1.008 -0.521 H14 A1JOL 39 A1JOL H15 H4 H 0 1 N N N N N N 30.759 2.122 15.648 2.711 3.073 0.862 H15 A1JOL 40 A1JOL H16 H5 H 0 1 N N N N N N 31.212 2.207 17.384 3.847 1.969 1.675 H16 A1JOL 41 A1JOL H43 H7 H 0 1 N N N N N N 43.177 4.838 11.515 -9.857 2.701 0.718 H43 A1JOL 42 A1JOL H5 H8 H 0 1 N N N N N N 32.444 7.854 22.511 3.368 -2.904 2.218 H5 A1JOL 43 A1JOL H6 H9 H 0 1 N N N N N N 32.146 6.170 21.961 3.475 -4.618 1.752 H6 A1JOL 44 A1JOL H1 H10 H 0 1 N N N N N N 31.077 6.803 16.813 3.039 -0.093 -2.065 H1 A1JOL 45 A1JOL H10 H11 H 0 1 N N N N N N 33.127 4.348 18.967 1.362 -0.152 1.152 H10 A1JOL 46 A1JOL H11 H12 H 0 1 N N N N N N 34.134 4.679 20.417 1.107 -1.479 2.311 H11 A1JOL 47 A1JOL H9 H13 H 0 1 N N N N N N 32.350 4.867 20.500 2.755 -1.066 1.779 H9 A1JOL 48 A1JOL H44 H14 H 0 1 N N N N N N 31.487 8.719 17.946 3.092 -2.520 -2.590 H44 A1JOL 49 A1JOL H7 H15 H 0 1 N N N N N N 33.687 8.341 20.449 1.771 -4.244 -0.010 H7 A1JOL 50 A1JOL H8 H16 H 0 1 N N N N N N 34.390 6.914 21.283 1.141 -3.796 1.593 H8 A1JOL 51 A1JOL H41 H17 H 0 1 N N N N N N 42.083 5.706 14.528 -6.310 2.056 1.388 H41 A1JOL 52 A1JOL H42 H18 H 0 1 N N N N N N 41.485 4.025 14.734 -7.102 0.495 1.715 H42 A1JOL 53 A1JOL H39 H19 H 0 1 N N N N N N 39.351 4.982 13.499 -6.597 -0.245 -0.598 H39 A1JOL 54 A1JOL H40 H20 H 0 1 N N N N N N 39.984 6.554 14.094 -5.806 1.316 -0.924 H40 A1JOL 55 A1JOL H3 H21 H 0 1 N N N N N N 39.173 4.140 15.762 -4.214 0.848 0.962 H3 A1JOL 56 A1JOL H36 H22 H 0 1 N N N N N N 41.163 5.263 16.702 -4.130 -1.412 1.914 H36 A1JOL 57 A1JOL H37 H23 H 0 1 N N N N N N 40.283 6.828 16.689 -5.745 -0.714 2.188 H37 A1JOL 58 A1JOL H38 H24 H 0 1 N N N N N N 39.713 5.487 17.739 -5.503 -1.917 0.899 H38 A1JOL 59 A1JOL H2 H25 H 0 1 N N N N N N 37.972 6.930 15.577 -4.314 -1.362 -1.149 H2 A1JOL 60 A1JOL H28 H26 H 0 1 N N N N N N 36.748 3.452 16.278 -2.254 1.068 0.760 H28 A1JOL 61 A1JOL H29 H27 H 0 1 N N N N N N 37.853 3.759 17.661 -2.766 -0.201 1.898 H29 A1JOL 62 A1JOL H30 H28 H 0 1 N N N N N N 36.074 3.841 17.897 -1.078 -0.138 1.337 H30 A1JOL 63 A1JOL H26 H29 H 0 1 N N N N N N 37.262 7.433 17.842 -2.991 -2.595 1.066 H26 A1JOL 64 A1JOL H27 H30 H 0 1 N N N N N N 38.036 6.020 18.637 -2.442 -2.980 -0.588 H27 A1JOL 65 A1JOL H24 H31 H 0 1 N N N N N N 36.133 7.006 19.941 -0.717 -1.868 1.679 H24 A1JOL 66 A1JOL H25 H32 H 0 1 N N N N N N 35.910 5.272 19.526 -0.666 -3.527 1.051 H25 A1JOL 67 A1JOL H23 H33 H 0 1 N N N N N N 34.633 7.693 18.207 0.102 -2.731 -1.116 H23 A1JOL 68 A1JOL H34 H34 H 0 1 N N N N N N 37.368 4.365 14.112 -3.961 0.306 -2.697 H34 A1JOL 69 A1JOL H35 H35 H 0 1 N N N N N N 37.200 6.072 13.579 -4.021 1.543 -1.410 H35 A1JOL 70 A1JOL H32 H36 H 0 1 N N N N N N 35.187 4.327 14.886 -1.704 0.942 -2.830 H32 A1JOL 71 A1JOL H33 H37 H 0 1 N N N N N N 34.956 5.939 14.127 -1.681 1.558 -1.146 H33 A1JOL 72 A1JOL H31 H38 H 0 1 N N N N N N 35.699 7.091 16.041 -1.643 -1.357 -2.091 H31 A1JOL 73 A1JOL H22 H39 H 0 1 N N N N N N 34.227 4.797 17.366 -0.024 0.075 0.070 H22 A1JOL 74 A1JOL H20 H40 H 0 1 N N N N N N 32.955 5.793 15.509 0.708 0.736 -2.219 H20 A1JOL 75 A1JOL H21 H41 H 0 1 N N N N N N 33.262 7.438 16.162 0.806 -0.981 -2.680 H21 A1JOL 76 A1JOL H45 H42 H 0 1 N N N N N N 29.974 7.340 19.068 4.733 -1.575 -0.980 H45 A1JOL 77 A1JOL H46 H43 H 0 1 N N N N N N 30.628 5.854 19.836 4.103 -1.128 0.624 H46 A1JOL 78 A1JOL H H44 H 0 1 N N N N N N 31.135 8.739 20.674 4.198 -3.954 -0.525 H A1JOL 79 A1JOL H4 H45 H 0 1 N N N N N N 29.097 7.764 21.257 5.856 -4.185 1.179 H4 A1JOL 80 A1JOL H12 H46 H 0 1 N N N N N N 31.948 4.443 18.213 1.581 1.091 -0.011 H12 A1JOL 81 A1JOL H19 H48 H 0 1 N N N N N N 27.013 4.005 18.928 7.796 4.322 -0.139 H19 A1JOL 82 A1JOL H17 H49 H 0 1 N N N N N N 28.116 2.389 15.179 3.776 5.420 0.692 H17 A1JOL 83 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JOL O C SING N N 1 A1JOL C C1 SING N N 2 A1JOL C1 C2 SING N N 3 A1JOL C2 C3 SING N N 4 A1JOL C4 C3 SING N N 5 A1JOL C3 C5 SING N N 6 A1JOL C5 C6 SING N N 7 A1JOL N C6 SING N N 8 A1JOL C7 N SING N N 9 A1JOL C8 C7 SING N N 10 A1JOL C9 C8 SING N N 11 A1JOL C9 C10 DOUB Y N 12 A1JOL C10 N1 SING Y N 13 A1JOL N1 C11 SING Y N 14 A1JOL C11 N2 DOUB Y N 15 A1JOL N2 C9 SING Y N 16 A1JOL C6 C12 SING N N 17 A1JOL C12 C13 SING N N 18 A1JOL C13 C14 SING N N 19 A1JOL C3 C14 SING N N 20 A1JOL C14 C15 SING N N 21 A1JOL C15 C16 SING N N 22 A1JOL C16 C17 SING N N 23 A1JOL C18 C17 SING N N 24 A1JOL C17 C19 SING N N 25 A1JOL C13 C19 SING N N 26 A1JOL C19 C20 SING N N 27 A1JOL C20 C21 SING N N 28 A1JOL C21 C22 SING N N 29 A1JOL C17 C22 SING N N 30 A1JOL C22 C23 SING N N 31 A1JOL C24 C23 SING N N 32 A1JOL C23 C25 SING N N 33 A1JOL C25 C26 SING N N 34 A1JOL C26 C27 SING N N 35 A1JOL O1 C27 SING N N 36 A1JOL C27 O2 DOUB N N 37 A1JOL O3 C5 SING N N 38 A1JOL C28 C5 SING N N 39 A1JOL C C28 SING N N 40 A1JOL N1 H18 SING N N 41 A1JOL C7 H13 SING N N 42 A1JOL C7 H14 SING N N 43 A1JOL C8 H15 SING N N 44 A1JOL C8 H16 SING N N 45 A1JOL O1 H43 SING N N 46 A1JOL C1 H5 SING N N 47 A1JOL C1 H6 SING N N 48 A1JOL C6 H1 SING N N 49 A1JOL C4 H10 SING N N 50 A1JOL C4 H11 SING N N 51 A1JOL C4 H9 SING N N 52 A1JOL O3 H44 SING N N 53 A1JOL C2 H7 SING N N 54 A1JOL C2 H8 SING N N 55 A1JOL C26 H41 SING N N 56 A1JOL C26 H42 SING N N 57 A1JOL C25 H39 SING N N 58 A1JOL C25 H40 SING N N 59 A1JOL C23 H3 SING N N 60 A1JOL C24 H36 SING N N 61 A1JOL C24 H37 SING N N 62 A1JOL C24 H38 SING N N 63 A1JOL C22 H2 SING N N 64 A1JOL C18 H28 SING N N 65 A1JOL C18 H29 SING N N 66 A1JOL C18 H30 SING N N 67 A1JOL C16 H26 SING N N 68 A1JOL C16 H27 SING N N 69 A1JOL C15 H24 SING N N 70 A1JOL C15 H25 SING N N 71 A1JOL C14 H23 SING N N 72 A1JOL C21 H34 SING N N 73 A1JOL C21 H35 SING N N 74 A1JOL C20 H32 SING N N 75 A1JOL C20 H33 SING N N 76 A1JOL C19 H31 SING N N 77 A1JOL C13 H22 SING N N 78 A1JOL C12 H20 SING N N 79 A1JOL C12 H21 SING N N 80 A1JOL C28 H45 SING N N 81 A1JOL C28 H46 SING N N 82 A1JOL C H SING N N 83 A1JOL O H4 SING N N 84 A1JOL N H12 SING N N 85 A1JOL C11 H19 SING N N 86 A1JOL C10 H17 SING N N 87 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JOL InChI InChI 1.06 "InChI=1S/C29H47N3O4/c1-18(4-7-26(34)35)22-5-6-23-21-14-25(31-13-10-19-16-30-17-32-19)29(36)15-20(33)8-12-28(29,3)24(21)9-11-27(22,23)2/h16-18,20-25,31,33,36H,4-15H2,1-3H3,(H,30,32)(H,34,35)/t18-,20+,21+,22-,23+,24+,25-,27-,28-,29+/m1/s1" A1JOL InChIKey InChI 1.06 USZWOQKHHMFOHA-NZSBQQPZSA-N A1JOL SMILES_CANONICAL CACTVS 3.385 "C[C@H](CCC(O)=O)[C@H]1CC[C@H]2[C@@H]3C[C@@H](NCCc4c[nH]cn4)[C@@]5(O)C[C@@H](O)CC[C@]5(C)[C@H]3CC[C@]12C" A1JOL SMILES CACTVS 3.385 "C[CH](CCC(O)=O)[CH]1CC[CH]2[CH]3C[CH](NCCc4c[nH]cn4)[C]5(O)C[CH](O)CC[C]5(C)[CH]3CC[C]12C" A1JOL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CCC(=O)O)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2C[C@H]([C@@]4([C@@]3(CC[C@@H](C4)O)C)O)NCCc5c[nH]cn5)C" A1JOL SMILES "OpenEye OEToolkits" 2.0.7 "CC(CCC(=O)O)C1CCC2C1(CCC3C2CC(C4(C3(CCC(C4)O)C)O)NCCc5c[nH]cn5)C" # _pdbx_chem_comp_identifier.comp_id A1JOL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(4~{R})-4-[(3~{S},5~{R},6~{R},8~{S},9~{S},10~{R},13~{R},14~{S},17~{R})-6-[2-(1~{H}-imidazol-4-yl)ethylamino]-10,13-dimethyl-3,5-bis(oxidanyl)-1,2,3,4,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JOL "Create component" 2025-09-05 PDBE A1JOL "Initial release" 2026-09-16 RCSB #