data_A1JOM # _chem_comp.id A1JOM _chem_comp.name "(~{E},4~{R})-4-[(3~{S},5~{R},6~{R},8~{S},9~{S},10~{R},13~{R},14~{S},17~{R})-10,13-dimethyl-3,5,6-tris(oxidanyl)-1,2,3,4,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]pent-2-enoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H38 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-05 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 406.556 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JOM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SLV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JOM C1 C1 C 0 1 N N N N N N 39.850 8.283 16.814 -3.462 2.444 -0.340 C1 A1JOM 1 A1JOM C2 C2 C 0 1 N N R N N N 39.038 7.529 15.758 -3.683 0.932 -0.281 C2 A1JOM 2 A1JOM C3 C3 C 0 1 N N N N N N 39.663 7.745 14.361 -5.099 0.647 0.148 C3 A1JOM 3 A1JOM C4 C4 C 0 1 N N N N N N 41.151 7.377 14.236 -5.911 -0.040 -0.652 C4 A1JOM 4 A1JOM C5 C5 C 0 1 N N N N N N 41.683 7.166 12.827 -7.292 -0.317 -0.234 C5 A1JOM 5 A1JOM O6 O1 O 0 1 N N N N N N 40.992 6.529 12.000 -7.693 0.080 0.843 O6 A1JOM 6 A1JOM O7 O2 O 0 1 N N N N N N 42.833 7.627 12.590 -8.115 -1.013 -1.044 O7 A1JOM 7 A1JOM C8 C6 C 0 1 N N R N N N 37.534 7.886 15.752 -2.711 0.313 0.726 C8 A1JOM 8 A1JOM C9 C7 C 0 1 N N N N N N 36.764 7.122 14.650 -2.893 -1.224 0.773 C9 A1JOM 9 A1JOM C10 C8 C 0 1 N N N N N N 35.307 6.974 15.133 -1.510 -1.841 0.429 C10 A1JOM 10 A1JOM C11 C9 C 0 1 N N S N N N 35.252 7.836 16.402 -0.532 -0.723 0.808 C11 A1JOM 11 A1JOM C12 C10 C 0 1 N N S N N N 34.100 7.671 17.410 0.821 -0.767 0.123 C12 A1JOM 12 A1JOM C13 C11 C 0 1 N N N N N N 32.742 7.806 16.710 1.585 -2.026 0.534 C13 A1JOM 13 A1JOM C14 C12 C 0 1 N N R N N N 31.546 7.807 17.666 2.963 -2.025 -0.130 C14 A1JOM 14 A1JOM O15 O3 O 0 1 N N N N N N 31.284 6.478 18.128 2.807 -2.002 -1.550 O15 A1JOM 15 A1JOM C16 C13 C 0 1 N N R N N N 31.728 8.835 18.800 3.745 -0.788 0.317 C16 A1JOM 16 A1JOM O17 O4 O 0 1 N N N N N N 31.722 10.119 18.136 3.905 -0.814 1.737 O17 A1JOM 17 A1JOM C18 C14 C 0 1 N N N N N N 30.522 8.881 19.769 5.122 -0.786 -0.351 C18 A1JOM 18 A1JOM C19 C15 C 0 1 N N S N N N 30.667 9.996 20.795 5.904 0.450 0.099 C19 A1JOM 19 A1JOM O20 O5 O 0 1 N N N N N N 29.538 10.004 21.672 7.190 0.452 -0.525 O20 A1JOM 20 A1JOM C21 C16 C 0 1 N N N N N N 31.970 9.860 21.566 5.140 1.712 -0.305 C21 A1JOM 21 A1JOM C22 C17 C 0 1 N N N N N N 33.177 9.797 20.619 3.763 1.710 0.362 C22 A1JOM 22 A1JOM C23 C18 C 0 1 N N R N N N 33.089 8.660 19.577 2.981 0.474 -0.087 C23 A1JOM 23 A1JOM C24 C19 C 0 1 N N N N N N 33.141 7.327 20.352 2.809 0.505 -1.607 C24 A1JOM 24 A1JOM C25 C20 C 0 1 N N S N N N 34.259 8.724 18.541 1.606 0.471 0.585 C25 A1JOM 25 A1JOM C26 C21 C 0 1 N N N N N N 35.662 8.694 19.179 0.862 1.762 0.258 C26 A1JOM 26 A1JOM C27 C22 C 0 1 N N N N N N 36.789 8.757 18.133 -0.562 1.751 0.840 C27 A1JOM 27 A1JOM C28 C23 C 0 1 N N R N N N 36.664 7.682 17.024 -1.271 0.534 0.274 C28 A1JOM 28 A1JOM C29 C24 C 0 1 N N N N N N 36.864 6.278 17.626 -1.207 0.564 -1.254 C29 A1JOM 29 A1JOM H1A H1 H 0 1 N N N N N N 39.400 8.125 17.805 -2.438 2.650 -0.651 H1A A1JOM 30 A1JOM H1B H2 H 0 1 N N N N N N 40.884 7.909 16.817 -4.154 2.885 -1.058 H1B A1JOM 31 A1JOM H1C H3 H 0 1 N N N N N N 39.850 9.357 16.578 -3.637 2.876 0.645 H1C A1JOM 32 A1JOM H2 H4 H 0 1 N N N N N N 39.117 6.456 15.987 -3.508 0.500 -1.267 H2 A1JOM 33 A1JOM H3A H5 H 0 1 N N N N N N 39.093 8.129 13.528 -5.455 1.000 1.105 H3A A1JOM 34 A1JOM H4A H6 H 0 1 N N N N N N 41.785 7.274 15.104 -5.556 -0.393 -1.609 H4A A1JOM 35 A1JOM H1 H7 H 0 1 N N N N N N 43.082 7.415 11.698 -9.014 -1.170 -0.725 H1 A1JOM 36 A1JOM H8 H8 H 0 1 N N N N N N 37.467 8.954 15.497 -2.868 0.743 1.715 H8 A1JOM 37 A1JOM H9A H9 H 0 1 N N N N N N 36.793 7.689 13.708 -3.202 -1.533 1.772 H9A A1JOM 38 A1JOM H9B H10 H 0 1 N N N N N N 37.213 6.130 14.495 -3.635 -1.536 0.038 H9B A1JOM 39 A1JOM H10A H11 H 0 0 N N N N N N 34.603 7.348 14.375 -1.326 -2.734 1.026 H10A A1JOM 40 A1JOM H10B H12 H 0 0 N N N N N N 35.075 5.924 15.363 -1.443 -2.067 -0.636 H10B A1JOM 41 A1JOM H11 H13 H 0 1 N N N N N N 35.195 8.878 16.053 -0.408 -0.678 1.890 H11 A1JOM 42 A1JOM H12 H14 H 0 1 N N N N N N 34.167 6.668 17.857 0.687 -0.754 -0.958 H12 A1JOM 43 A1JOM H13A H15 H 0 0 N N N N N N 32.736 8.751 16.147 1.703 -2.043 1.617 H13A A1JOM 44 A1JOM H13B H16 H 0 0 N N N N N N 32.627 6.963 16.013 1.029 -2.908 0.216 H13B A1JOM 45 A1JOM H14 H17 H 0 1 N N N N N N 30.675 8.138 17.081 3.508 -2.923 0.161 H14 A1JOM 46 A1JOM H15 H18 H 0 1 N N N N N N 30.541 6.489 18.720 2.321 -2.759 -1.905 H15 A1JOM 47 A1JOM H17 H19 H 0 1 N N N N N N 31.831 10.809 18.780 4.383 -1.587 2.065 H17 A1JOM 48 A1JOM H18A H20 H 0 0 N N N N N N 29.604 9.049 19.187 5.666 -1.685 -0.064 H18A A1JOM 49 A1JOM H18B H21 H 0 0 N N N N N N 30.451 7.918 20.296 5.000 -0.765 -1.434 H18B A1JOM 50 A1JOM H19 H22 H 0 1 N N N N N N 30.700 10.950 20.249 6.025 0.429 1.182 H19 A1JOM 51 A1JOM H20 H23 H 0 1 N N N N N N 29.636 10.702 22.309 7.742 1.208 -0.285 H20 A1JOM 52 A1JOM H21A H24 H 0 0 N N N N N N 32.083 10.727 22.233 5.697 2.592 0.014 H21A A1JOM 53 A1JOM H21B H25 H 0 0 N N N N N N 31.937 8.938 22.165 5.018 1.732 -1.388 H21B A1JOM 54 A1JOM H22A H26 H 0 0 N N N N N N 33.248 10.755 20.083 3.885 1.690 1.445 H22A A1JOM 55 A1JOM H22B H27 H 0 0 N N N N N N 34.084 9.646 21.222 3.219 2.609 0.075 H22B A1JOM 56 A1JOM H24A H28 H 0 0 N N N N N N 33.081 6.488 19.643 3.770 0.317 -2.086 H24A A1JOM 57 A1JOM H24B H29 H 0 0 N N N N N N 34.085 7.266 20.913 2.097 -0.265 -1.908 H24B A1JOM 58 A1JOM H24C H30 H 0 0 N N N N N N 32.294 7.277 21.052 2.436 1.483 -1.911 H24C A1JOM 59 A1JOM H25 H31 H 0 1 N N N N N N 34.170 9.705 18.052 1.742 0.406 1.665 H25 A1JOM 60 A1JOM H26A H32 H 0 0 N N N N N N 35.760 9.556 19.855 1.411 2.605 0.675 H26A A1JOM 61 A1JOM H26B H33 H 0 0 N N N N N N 35.767 7.763 19.755 0.804 1.875 -0.824 H26B A1JOM 62 A1JOM H27A H34 H 0 0 N N N N N N 36.769 9.750 17.659 -0.517 1.683 1.928 H27A A1JOM 63 A1JOM H27B H35 H 0 0 N N N N N N 37.751 8.615 18.648 -1.089 2.658 0.546 H27B A1JOM 64 A1JOM H29A H36 H 0 0 N N N N N N 36.774 5.522 16.832 -0.165 0.591 -1.574 H29A A1JOM 65 A1JOM H29B H37 H 0 0 N N N N N N 37.863 6.213 18.082 -1.687 -0.329 -1.655 H29B A1JOM 66 A1JOM H29C H38 H 0 0 N N N N N N 36.098 6.096 18.394 -1.724 1.450 -1.622 H29C A1JOM 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JOM C1 C2 SING N N 1 A1JOM C2 C3 SING N N 2 A1JOM C3 C4 DOUB N E 3 A1JOM C4 C5 SING N N 4 A1JOM C5 O6 DOUB N N 5 A1JOM C5 O7 SING N N 6 A1JOM C2 C8 SING N N 7 A1JOM C8 C9 SING N N 8 A1JOM C9 C10 SING N N 9 A1JOM C10 C11 SING N N 10 A1JOM C11 C12 SING N N 11 A1JOM C12 C13 SING N N 12 A1JOM C13 C14 SING N N 13 A1JOM C14 O15 SING N N 14 A1JOM C14 C16 SING N N 15 A1JOM C16 O17 SING N N 16 A1JOM C16 C18 SING N N 17 A1JOM C18 C19 SING N N 18 A1JOM C19 O20 SING N N 19 A1JOM C19 C21 SING N N 20 A1JOM C21 C22 SING N N 21 A1JOM C22 C23 SING N N 22 A1JOM C23 C24 SING N N 23 A1JOM C23 C25 SING N N 24 A1JOM C25 C26 SING N N 25 A1JOM C26 C27 SING N N 26 A1JOM C27 C28 SING N N 27 A1JOM C28 C29 SING N N 28 A1JOM C28 C8 SING N N 29 A1JOM C28 C11 SING N N 30 A1JOM C25 C12 SING N N 31 A1JOM C23 C16 SING N N 32 A1JOM C1 H1A SING N N 33 A1JOM C1 H1B SING N N 34 A1JOM C1 H1C SING N N 35 A1JOM C2 H2 SING N N 36 A1JOM C3 H3A SING N N 37 A1JOM C4 H4A SING N N 38 A1JOM O7 H1 SING N N 39 A1JOM C8 H8 SING N N 40 A1JOM C9 H9A SING N N 41 A1JOM C9 H9B SING N N 42 A1JOM C10 H10A SING N N 43 A1JOM C10 H10B SING N N 44 A1JOM C11 H11 SING N N 45 A1JOM C12 H12 SING N N 46 A1JOM C13 H13A SING N N 47 A1JOM C13 H13B SING N N 48 A1JOM C14 H14 SING N N 49 A1JOM O15 H15 SING N N 50 A1JOM O17 H17 SING N N 51 A1JOM C18 H18A SING N N 52 A1JOM C18 H18B SING N N 53 A1JOM C19 H19 SING N N 54 A1JOM O20 H20 SING N N 55 A1JOM C21 H21A SING N N 56 A1JOM C21 H21B SING N N 57 A1JOM C22 H22A SING N N 58 A1JOM C22 H22B SING N N 59 A1JOM C24 H24A SING N N 60 A1JOM C24 H24B SING N N 61 A1JOM C24 H24C SING N N 62 A1JOM C25 H25 SING N N 63 A1JOM C26 H26A SING N N 64 A1JOM C26 H26B SING N N 65 A1JOM C27 H27A SING N N 66 A1JOM C27 H27B SING N N 67 A1JOM C29 H29A SING N N 68 A1JOM C29 H29B SING N N 69 A1JOM C29 H29C SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JOM InChI InChI 1.06 "InChI=1S/C24H38O5/c1-14(4-7-21(27)28)17-5-6-18-16-12-20(26)24(29)13-15(25)8-11-23(24,3)19(16)9-10-22(17,18)2/h4,7,14-20,25-26,29H,5-6,8-13H2,1-3H3,(H,27,28)/b7-4+/t14-,15+,16+,17-,18+,19+,20-,22-,23-,24+/m1/s1" A1JOM InChIKey InChI 1.06 HOBBDIMNUWEHBL-VPVUYPHRSA-N A1JOM SMILES_CANONICAL CACTVS 3.385 "C[C@H](\C=C\C(O)=O)[C@H]1CC[C@H]2[C@@H]3C[C@@H](O)[C@@]4(O)C[C@@H](O)CC[C@]4(C)[C@H]3CC[C@]12C" A1JOM SMILES CACTVS 3.385 "C[CH](C=CC(O)=O)[CH]1CC[CH]2[CH]3C[CH](O)[C]4(O)C[CH](O)CC[C]4(C)[CH]3CC[C]12C" A1JOM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](/C=C/C(=O)O)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2C[C@H]([C@@]4([C@@]3(CC[C@@H](C4)O)C)O)O)C" A1JOM SMILES "OpenEye OEToolkits" 2.0.7 "CC(C=CC(=O)O)C1CCC2C1(CCC3C2CC(C4(C3(CCC(C4)O)C)O)O)C" # _pdbx_chem_comp_identifier.comp_id A1JOM _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(~{E},4~{R})-4-[(3~{S},5~{R},6~{R},8~{S},9~{S},10~{R},13~{R},14~{S},17~{R})-10,13-dimethyl-3,5,6-tris(oxidanyl)-1,2,3,4,6,7,8,9,11,12,14,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]pent-2-enoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JOM "Create component" 2025-09-05 PDBE A1JOM "Initial release" 2026-09-16 RCSB #