data_A1JSE # _chem_comp.id A1JSE _chem_comp.name "~{N}-(2-methylpropyl)-2-[4-[(1-oxidanylidene-2,7-naphthyridin-2-yl)methyl]phenyl]-~{N}-[[(2~{S})-piperidin-2-yl]methyl]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H34 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-14 _chem_comp.pdbx_modified_date 2026-10-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 446.584 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JSE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9SZG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JSE C10 C1 C 0 1 N N N N N N -42.540 24.439 23.865 -7.841 -2.151 1.149 C10 A1JSE 1 A1JSE N12 N1 N 0 1 N N N N N N -42.629 26.902 23.358 -6.000 -0.535 1.105 N12 A1JSE 2 A1JSE C13 C2 C 0 1 N N N N N N -43.437 30.098 22.711 -2.645 0.310 -0.405 C13 A1JSE 3 A1JSE C15 C3 C 0 1 N N N N N N -42.563 31.359 22.720 -1.486 0.834 0.403 C15 A1JSE 4 A1JSE C17 C4 C 0 1 Y N N N N N -42.505 32.697 24.826 0.551 0.668 -1.042 C17 A1JSE 5 A1JSE C20 C5 C 0 1 N N N N N N -44.157 35.915 25.864 3.360 -1.846 -1.250 C20 A1JSE 6 A1JSE C22 C6 C 0 1 N N N N N N -43.202 37.658 24.321 4.806 -1.968 0.707 C22 A1JSE 7 A1JSE C24 C7 C 0 1 Y N N N N N -41.349 39.148 24.742 6.643 -0.434 1.065 C24 A1JSE 8 A1JSE C26 C8 C 0 1 Y N N N N N -39.514 40.527 25.338 8.423 1.118 1.331 C26 A1JSE 9 A1JSE C28 C9 C 0 1 Y N N N N N -40.231 38.974 26.905 7.089 1.306 -0.555 C28 A1JSE 10 A1JSE C01 C10 C 0 1 N N N N N N -44.167 29.499 18.616 -5.063 3.414 -0.851 C01 A1JSE 11 A1JSE C02 C11 C 0 1 N N N N N N -42.940 30.037 19.305 -3.957 3.206 0.185 C02 A1JSE 12 A1JSE C03 C12 C 0 1 N N N N N N -41.923 30.285 18.202 -4.066 4.281 1.269 C03 A1JSE 13 A1JSE C04 C13 C 0 1 N N N N N N -42.383 29.332 20.589 -4.108 1.823 0.822 C04 A1JSE 14 A1JSE C06 C14 C 0 1 N N N N N N -44.133 27.903 21.680 -5.012 0.283 -0.980 C06 A1JSE 15 A1JSE C07 C15 C 0 1 N N S N N N -43.280 26.686 22.072 -5.633 -0.919 -0.264 C07 A1JSE 16 A1JSE C08 C16 C 0 1 N N N N N N -44.067 25.313 22.094 -6.883 -1.373 -1.020 C08 A1JSE 17 A1JSE C09 C17 C 0 1 N N N N N N -43.147 24.173 22.525 -7.512 -2.562 -0.289 C09 A1JSE 18 A1JSE C11 C18 C 0 1 N N N N N N -41.733 25.759 23.880 -6.563 -1.674 1.842 C11 A1JSE 19 A1JSE C16 C19 C 0 1 Y N N N N N -42.967 32.495 23.514 -0.220 0.138 -0.024 C16 A1JSE 20 A1JSE C18 C20 C 0 1 Y N N N N N -42.876 33.799 25.609 1.709 0.026 -1.438 C18 A1JSE 21 A1JSE C19 C21 C 0 1 Y N N N N N -43.787 34.724 25.109 2.097 -1.146 -0.817 C19 A1JSE 22 A1JSE C23 C22 C 0 1 N N N N N N -42.377 38.670 23.895 5.831 -1.573 1.482 C23 A1JSE 23 A1JSE C25 C23 C 0 1 Y N N N N N -40.461 40.178 24.390 7.726 0.043 1.809 C25 A1JSE 24 A1JSE C29 C24 C 0 1 Y N N N N N -41.246 38.546 26.015 6.319 0.219 -0.150 C29 A1JSE 25 A1JSE C30 C25 C 0 1 N N N N N N -42.141 37.461 26.428 5.180 -0.280 -0.925 C30 A1JSE 26 A1JSE C32 C26 C 0 1 Y N N N N N -44.264 34.532 23.826 1.327 -1.676 0.201 C32 A1JSE 27 A1JSE C33 C27 C 0 1 Y N N N N N -43.881 33.422 23.030 0.172 -1.031 0.601 C33 A1JSE 28 A1JSE N05 N2 N 0 1 N N N N N N -43.317 29.143 21.685 -3.886 0.791 -0.194 N05 A1JSE 29 A1JSE N21 N3 N 0 1 N N N N N N -43.170 37.029 25.570 4.490 -1.344 -0.464 N21 A1JSE 30 A1JSE N27 N4 N 0 1 Y N N N N N -39.353 39.972 26.593 8.098 1.708 0.192 N27 A1JSE 31 A1JSE O14 O1 O 0 1 N N N N N N -44.250 29.893 23.657 -2.460 -0.544 -1.246 O14 A1JSE 32 A1JSE O31 O2 O 0 1 N N N N N N -42.036 36.917 27.541 4.867 0.251 -1.975 O31 A1JSE 33 A1JSE H101 H1 H 0 0 N N N N N N -43.344 24.505 24.613 -8.572 -1.344 1.138 H101 A1JSE 34 A1JSE H102 H2 H 0 0 N N N N N N -41.867 23.608 24.122 -8.250 -3.006 1.687 H102 A1JSE 35 A1JSE H1 H3 H 0 1 N N N N N N -43.345 27.061 24.038 -6.639 0.245 1.103 H1 A1JSE 36 A1JSE H151 H5 H 0 0 N N N N N N -41.567 31.056 23.077 -1.384 1.906 0.240 H151 A1JSE 37 A1JSE H152 H6 H 0 0 N N N N N N -42.490 31.706 21.679 -1.666 0.643 1.462 H152 A1JSE 38 A1JSE H171 H7 H 0 0 N N N N N N -41.831 31.968 25.252 0.245 1.581 -1.531 H171 A1JSE 39 A1JSE H201 H8 H 0 0 N N N N N N -44.142 35.686 26.940 3.254 -2.919 -1.089 H201 A1JSE 40 A1JSE H202 H9 H 0 0 N N N N N N -45.168 36.235 25.572 3.538 -1.653 -2.307 H202 A1JSE 41 A1JSE H221 H10 H 0 0 N N N N N N -43.950 37.314 23.622 4.214 -2.815 1.020 H221 A1JSE 42 A1JSE H261 H11 H 0 0 N N N N N N -38.829 41.317 25.068 9.262 1.495 1.897 H261 A1JSE 43 A1JSE H281 H12 H 0 0 N N N N N N -40.148 38.492 27.868 6.860 1.819 -1.478 H281 A1JSE 44 A1JSE H011 H13 H 0 0 N N N N N N -44.949 29.297 19.363 -4.985 2.649 -1.623 H011 A1JSE 45 A1JSE H012 H14 H 0 0 N N N N N N -44.535 30.240 17.892 -6.036 3.342 -0.365 H012 A1JSE 46 A1JSE H013 H15 H 0 0 N N N N N N -43.913 28.567 18.090 -4.955 4.400 -1.305 H013 A1JSE 47 A1JSE H021 H16 H 0 0 N N N N N N -43.228 31.041 19.650 -2.984 3.278 -0.301 H021 A1JSE 48 A1JSE H031 H17 H 0 0 N N N N N N -40.995 30.682 18.640 -5.038 4.209 1.756 H031 A1JSE 49 A1JSE H032 H18 H 0 0 N N N N N N -41.708 29.340 17.683 -3.278 4.133 2.008 H032 A1JSE 50 A1JSE H033 H19 H 0 0 N N N N N N -42.330 31.013 17.485 -3.958 5.266 0.816 H033 A1JSE 51 A1JSE H041 H20 H 0 0 N N N N N N -42.013 28.340 20.291 -3.376 1.709 1.622 H041 A1JSE 52 A1JSE H042 H21 H 0 0 N N N N N N -41.545 29.938 20.965 -5.113 1.719 1.231 H042 A1JSE 53 A1JSE H061 H22 H 0 0 N N N N N N -44.544 27.746 20.672 -4.659 -0.024 -1.965 H061 A1JSE 54 A1JSE H062 H23 H 0 0 N N N N N N -44.958 28.012 22.399 -5.761 1.066 -1.091 H062 A1JSE 55 A1JSE H071 H24 H 0 0 N N N N N N -42.495 26.584 21.308 -4.911 -1.735 -0.232 H071 A1JSE 56 A1JSE H081 H25 H 0 0 N N N N N N -44.905 25.388 22.802 -7.600 -0.553 -1.065 H081 A1JSE 57 A1JSE H082 H26 H 0 0 N N N N N N -44.456 25.103 21.087 -6.608 -1.671 -2.032 H082 A1JSE 58 A1JSE H091 H27 H 0 0 N N N N N N -43.730 23.242 22.575 -6.810 -3.396 -0.278 H091 A1JSE 59 A1JSE H092 H28 H 0 0 N N N N N N -42.342 24.062 21.783 -8.427 -2.862 -0.800 H092 A1JSE 60 A1JSE H111 H29 H 0 0 N N N N N N -41.411 25.983 24.908 -6.796 -1.367 2.862 H111 A1JSE 61 A1JSE H112 H30 H 0 0 N N N N N N -40.849 25.658 23.233 -5.836 -2.487 1.865 H112 A1JSE 62 A1JSE H181 H31 H 0 0 N N N N N N -42.457 33.929 26.596 2.311 0.441 -2.234 H181 A1JSE 63 A1JSE H231 H32 H 0 0 N N N N N N -42.513 39.101 22.914 6.051 -2.092 2.403 H231 A1JSE 64 A1JSE H251 H33 H 0 0 N N N N N N -40.514 40.672 23.431 8.005 -0.426 2.741 H251 A1JSE 65 A1JSE H321 H34 H 0 0 N N N N N N -44.954 35.254 23.414 1.631 -2.592 0.687 H321 A1JSE 66 A1JSE H331 H35 H 0 0 N N N N N N -44.302 33.297 22.043 -0.430 -1.446 1.397 H331 A1JSE 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JSE C02 C01 SING N N 1 A1JSE C03 C02 SING N N 2 A1JSE C04 C02 SING N N 3 A1JSE N05 C04 SING N N 4 A1JSE C07 C06 SING N N 5 A1JSE C08 C07 SING N N 6 A1JSE C09 C08 SING N N 7 A1JSE C10 C09 SING N N 8 A1JSE C11 C10 SING N N 9 A1JSE N12 C11 SING N N 10 A1JSE C06 N05 SING N N 11 A1JSE C13 N05 SING N N 12 A1JSE O14 C13 DOUB N N 13 A1JSE C15 C13 SING N N 14 A1JSE C16 C15 SING N N 15 A1JSE C17 C16 DOUB Y N 16 A1JSE C18 C17 SING Y N 17 A1JSE C19 C18 DOUB Y N 18 A1JSE N21 C20 SING N N 19 A1JSE C22 N21 SING N N 20 A1JSE C23 C22 DOUB N N 21 A1JSE C24 C23 SING N N 22 A1JSE C25 C24 DOUB Y N 23 A1JSE C26 C25 SING Y N 24 A1JSE N27 C26 DOUB Y N 25 A1JSE C28 N27 SING Y N 26 A1JSE C29 C28 DOUB Y N 27 A1JSE C30 C29 SING N N 28 A1JSE O31 C30 DOUB N N 29 A1JSE C20 C19 SING N N 30 A1JSE C32 C19 SING Y N 31 A1JSE C33 C32 DOUB Y N 32 A1JSE C07 N12 SING N N 33 A1JSE C16 C33 SING Y N 34 A1JSE N21 C30 SING N N 35 A1JSE C24 C29 SING Y N 36 A1JSE C10 H101 SING N N 37 A1JSE C10 H102 SING N N 38 A1JSE N12 H1 SING N N 39 A1JSE C15 H151 SING N N 40 A1JSE C15 H152 SING N N 41 A1JSE C17 H171 SING N N 42 A1JSE C20 H201 SING N N 43 A1JSE C20 H202 SING N N 44 A1JSE C22 H221 SING N N 45 A1JSE C26 H261 SING N N 46 A1JSE C28 H281 SING N N 47 A1JSE C01 H011 SING N N 48 A1JSE C01 H012 SING N N 49 A1JSE C01 H013 SING N N 50 A1JSE C02 H021 SING N N 51 A1JSE C03 H031 SING N N 52 A1JSE C03 H032 SING N N 53 A1JSE C03 H033 SING N N 54 A1JSE C04 H041 SING N N 55 A1JSE C04 H042 SING N N 56 A1JSE C06 H061 SING N N 57 A1JSE C06 H062 SING N N 58 A1JSE C07 H071 SING N N 59 A1JSE C08 H081 SING N N 60 A1JSE C08 H082 SING N N 61 A1JSE C09 H091 SING N N 62 A1JSE C09 H092 SING N N 63 A1JSE C11 H111 SING N N 64 A1JSE C11 H112 SING N N 65 A1JSE C18 H181 SING N N 66 A1JSE C23 H231 SING N N 67 A1JSE C25 H251 SING N N 68 A1JSE C32 H321 SING N N 69 A1JSE C33 H331 SING N N 70 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JSE InChI InChI 1.06 "InChI=1S/C27H34N4O2/c1-20(2)17-31(19-24-5-3-4-12-29-24)26(32)15-21-6-8-22(9-7-21)18-30-14-11-23-10-13-28-16-25(23)27(30)33/h6-11,13-14,16,20,24,29H,3-5,12,15,17-19H2,1-2H3/t24-/m0/s1" A1JSE InChIKey InChI 1.06 HSTXMJFFUZXDAR-DEOSSOPVSA-N A1JSE SMILES_CANONICAL CACTVS 3.385 "CC(C)CN(C[C@@H]1CCCCN1)C(=O)Cc2ccc(CN3C=Cc4ccncc4C3=O)cc2" A1JSE SMILES CACTVS 3.385 "CC(C)CN(C[CH]1CCCCN1)C(=O)Cc2ccc(CN3C=Cc4ccncc4C3=O)cc2" A1JSE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)CN(C[C@@H]1CCCCN1)C(=O)Cc2ccc(cc2)CN3C=Cc4ccncc4C3=O" A1JSE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CN(CC1CCCCN1)C(=O)Cc2ccc(cc2)CN3C=Cc4ccncc4C3=O" # _pdbx_chem_comp_identifier.comp_id A1JSE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(2-methylpropyl)-2-[4-[(1-oxidanylidene-2,7-naphthyridin-2-yl)methyl]phenyl]-~{N}-[[(2~{S})-piperidin-2-yl]methyl]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JSE "Create component" 2025-10-14 PDBE A1JSE "Initial release" 2026-10-28 RCSB #