data_A1JSW # _chem_comp.id A1JSW _chem_comp.name "(phenylmethyl) ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[4-(1-methoxyethenyl)-1,3-thiazol-2-yl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 N4 O6 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-21 _chem_comp.pdbx_modified_date 2026-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 544.663 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JSW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9T0R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JSW N1 N1 N 0 1 N N N N N N 5.022 -3.455 -4.659 2.663 0.291 0.365 N1 A1JSW 1 A1JSW N3 N2 N 0 1 N N N N N N -0.051 0.918 -5.600 -0.271 -4.114 -1.927 N3 A1JSW 2 A1JSW C4 C1 C 0 1 Y N N N N N 0.922 -3.014 -8.516 7.740 2.231 -0.113 C4 A1JSW 3 A1JSW C5 C2 C 0 1 Y N N N N N 2.210 -3.104 -7.983 7.196 1.141 -0.766 C5 A1JSW 4 A1JSW C6 C3 C 0 1 Y N N N N N 3.145 -2.142 -8.356 7.492 0.914 -2.097 C6 A1JSW 5 A1JSW C7 C4 C 0 1 N N N N N N 2.555 -4.269 -7.086 6.279 0.200 -0.027 C7 A1JSW 6 A1JSW C8 C5 C 0 1 N N N N N N 3.795 -3.526 -5.200 3.957 -0.078 0.448 C8 A1JSW 7 A1JSW C10 C6 C 0 1 N N N N N N 5.084 -1.110 -3.922 0.309 -0.295 0.331 C10 A1JSW 8 A1JSW C13 C7 C 0 1 N N N N N N 8.542 -4.306 -2.193 3.003 -1.931 3.260 C13 A1JSW 9 A1JSW C15 C8 C 0 1 N N S N N N 4.112 1.047 -3.259 -2.098 -0.642 0.167 C15 A1JSW 10 A1JSW C17 C9 C 0 1 N N N N N N 2.581 1.214 -3.273 -2.638 -1.899 -0.516 C17 A1JSW 11 A1JSW C20 C10 C 0 1 N N N N N N 0.938 0.619 -6.621 -1.244 -4.213 -3.021 C20 A1JSW 12 A1JSW C21 C11 C 0 1 N N N N N N 0.356 0.611 -4.367 -0.511 -3.039 -1.156 C21 A1JSW 13 A1JSW C22 C12 C 0 1 Y N N N N N 6.220 2.146 -2.585 -4.376 0.223 0.626 C22 A1JSW 14 A1JSW C24 C13 C 0 1 Y N N N N N 8.504 2.994 -2.959 -6.567 0.502 -0.468 C24 A1JSW 15 A1JSW C26 C14 C 0 1 N N N N N N 9.344 -0.510 -3.124 -5.838 4.068 0.058 C26 A1JSW 16 A1JSW C1 C15 C 0 1 Y N N N N N 2.791 -1.107 -9.213 8.333 1.776 -2.774 C1 A1JSW 17 A1JSW C2 C16 C 0 1 Y N N N N N 1.503 -1.019 -9.715 8.877 2.866 -2.122 C2 A1JSW 18 A1JSW C3 C17 C 0 1 Y N N N N N 0.569 -1.977 -9.368 8.576 3.097 -0.792 C3 A1JSW 19 A1JSW O1 O1 O 0 1 N N N N N N 3.817 -4.195 -6.378 4.907 0.657 -0.159 O1 A1JSW 20 A1JSW O2 O2 O 0 1 N N N N N N 2.800 -2.982 -4.751 4.265 -1.075 1.071 O2 A1JSW 21 A1JSW C9 C18 C 0 1 N N S N N N 5.319 -2.575 -3.548 1.629 -0.509 1.025 C9 A1JSW 22 A1JSW C11 C19 C 0 1 N N N N N N 6.739 -2.781 -3.032 1.511 -0.081 2.489 C11 A1JSW 23 A1JSW C12 C20 C 0 1 N N N N N N 7.075 -4.200 -2.584 2.811 -0.414 3.224 C12 A1JSW 24 A1JSW C14 C21 C 0 1 N N N N N N 6.191 -4.670 -1.456 2.740 0.125 4.655 C14 A1JSW 25 A1JSW O3 O3 O 0 1 N N N N N N 5.408 -0.672 -5.036 0.239 0.452 -0.622 O3 A1JSW 26 A1JSW N2 N3 N 0 1 N N N N N N 4.500 -0.335 -3.002 -0.794 -0.934 0.769 N2 A1JSW 27 A1JSW C16 C22 C 0 1 N N S N N N 4.781 1.997 -2.247 -3.073 -0.195 1.258 C16 A1JSW 28 A1JSW C18 C23 C 0 1 N N S N N N 1.879 0.460 -4.401 -1.716 -2.286 -1.675 C18 A1JSW 29 A1JSW C19 C24 C 0 1 N N N N N N 2.251 0.798 -5.847 -2.419 -3.297 -2.613 C19 A1JSW 30 A1JSW O4 O4 O 0 1 N N N N N N 4.285 3.317 -2.411 -3.308 -1.278 2.160 O4 A1JSW 31 A1JSW N4 N4 N 0 1 Y N N N N N 7.068 1.211 -2.891 -4.765 1.442 0.484 N4 A1JSW 32 A1JSW C23 C25 C 0 1 Y N N N N N 8.360 1.675 -3.061 -5.939 1.639 -0.100 C23 A1JSW 33 A1JSW S1 S1 S 0 1 Y N N N N N 6.971 3.713 -2.576 -5.540 -0.855 -0.010 S1 A1JSW 34 A1JSW C25 C26 C 0 1 N N N N N N 9.411 0.787 -3.349 -6.510 2.984 -0.329 C25 A1JSW 35 A1JSW O5 O5 O 0 1 N N N N N N 10.566 1.345 -3.814 -7.720 3.115 -0.933 O5 A1JSW 36 A1JSW C27 C27 C 0 1 N N N N N N 11.690 0.529 -4.142 -8.210 4.444 -1.122 C27 A1JSW 37 A1JSW O6 O6 O 0 1 N N N N N N -0.370 0.425 -3.347 0.142 -2.721 -0.185 O6 A1JSW 38 A1JSW H8 H1 H 0 1 N N N N N N 5.752 -4.026 -5.034 2.418 1.089 -0.129 H8 A1JSW 39 A1JSW H29 H2 H 0 1 N N N N N N -0.947 1.314 -5.801 0.450 -4.746 -1.777 H29 A1JSW 40 A1JSW H4 H3 H 0 1 N N N N N N 0.188 -3.764 -8.261 7.508 2.408 0.927 H4 A1JSW 41 A1JSW H5 H4 H 0 1 N N N N N N 4.154 -2.201 -7.976 7.067 0.062 -2.607 H5 A1JSW 42 A1JSW H6 H5 H 0 1 N N N N N N 1.756 -4.359 -6.335 6.371 -0.801 -0.447 H6 A1JSW 43 A1JSW H7 H6 H 0 1 N N N N N N 2.576 -5.175 -7.710 6.555 0.178 1.028 H7 A1JSW 44 A1JSW H13 H7 H 0 1 N N N N N N 8.763 -5.335 -1.874 2.163 -2.391 3.781 H13 A1JSW 45 A1JSW H14 H8 H 0 1 N N N N N N 9.171 -4.047 -3.057 3.053 -2.315 2.242 H14 A1JSW 46 A1JSW H15 H9 H 0 1 N N N N N N 8.752 -3.612 -1.366 3.929 -2.168 3.784 H15 A1JSW 47 A1JSW H20 H10 H 0 1 N N N N N N 4.478 1.326 -4.258 -1.987 0.154 -0.570 H20 A1JSW 48 A1JSW H22 H11 H 0 1 N N N N N N 2.185 0.847 -2.314 -2.677 -2.716 0.204 H22 A1JSW 49 A1JSW H23 H12 H 0 1 N N N N N N 2.352 2.285 -3.379 -3.639 -1.703 -0.899 H23 A1JSW 50 A1JSW H27 H13 H 0 1 N N N N N N 0.870 1.323 -7.463 -0.800 -3.865 -3.954 H27 A1JSW 51 A1JSW H28 H14 H 0 1 N N N N N N 0.830 -0.410 -6.994 -1.587 -5.242 -3.129 H28 A1JSW 52 A1JSW H31 H15 H 0 1 N N N N N N 9.430 3.533 -3.094 -7.528 0.435 -0.956 H31 A1JSW 53 A1JSW H32 H16 H 0 1 N N N N N N 10.205 -1.135 -3.308 -6.255 5.050 -0.109 H32 A1JSW 54 A1JSW H33 H17 H 0 1 N N N N N N 8.428 -0.948 -2.756 -4.877 3.964 0.539 H33 A1JSW 55 A1JSW H1 H18 H 0 1 N N N N N N 3.526 -0.365 -9.490 8.569 1.596 -3.813 H1 A1JSW 56 A1JSW H2 H19 H 0 1 N N N N N N 1.230 -0.207 -10.373 9.534 3.540 -2.651 H2 A1JSW 57 A1JSW H3 H20 H 0 1 N N N N N N -0.436 -1.919 -9.760 9.001 3.949 -0.282 H3 A1JSW 58 A1JSW H9 H21 H 0 1 N N N N N N 4.632 -2.816 -2.723 1.899 -1.564 0.975 H9 A1JSW 59 A1JSW H10 H22 H 0 1 N N N N N N 7.436 -2.506 -3.838 1.329 0.992 2.541 H10 A1JSW 60 A1JSW H11 H23 H 0 1 N N N N N N 6.888 -2.110 -2.173 0.682 -0.613 2.957 H11 A1JSW 61 A1JSW H12 H24 H 0 1 N N N N N N 6.909 -4.868 -3.442 3.651 0.047 2.704 H12 A1JSW 62 A1JSW H16 H25 H 0 1 N N N N N N 6.473 -5.694 -1.171 1.900 -0.335 5.175 H16 A1JSW 63 A1JSW H17 H26 H 0 1 N N N N N N 6.314 -4.002 -0.591 3.666 -0.111 5.178 H17 A1JSW 64 A1JSW H18 H27 H 0 1 N N N N N N 5.141 -4.656 -1.783 2.603 1.207 4.629 H18 A1JSW 65 A1JSW H19 H28 H 0 1 N N N N N N 4.321 -0.721 -2.097 -0.725 -1.588 1.482 H19 A1JSW 66 A1JSW H21 H29 H 0 1 N N N N N N 4.647 1.624 -1.221 -2.648 0.647 1.804 H21 A1JSW 67 A1JSW H24 H30 H 0 1 N N N N N N 2.097 -0.608 -4.256 -1.411 -1.399 -2.230 H24 A1JSW 68 A1JSW H25 H31 H 0 1 N N N N N N 2.613 1.834 -5.926 -2.842 -2.794 -3.482 H25 A1JSW 69 A1JSW H26 H32 H 0 1 N N N N N N 3.023 0.110 -6.223 -3.184 -3.858 -2.077 H26 A1JSW 70 A1JSW H30 H33 H 0 1 N N N N N N 4.704 3.893 -1.783 -3.687 -2.063 1.742 H30 A1JSW 71 A1JSW H34 H34 H 0 1 N N N N N N 12.515 1.165 -4.496 -7.511 5.005 -1.742 H34 A1JSW 72 A1JSW H35 H35 H 0 1 N N N N N N 12.013 -0.027 -3.249 -9.182 4.406 -1.614 H35 A1JSW 73 A1JSW H36 H36 H 0 1 N N N N N N 11.409 -0.181 -4.934 -8.312 4.935 -0.154 H36 A1JSW 74 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JSW C1 C2 DOUB Y N 1 A1JSW C2 C3 SING Y N 2 A1JSW C3 C4 DOUB Y N 3 A1JSW C4 C5 SING Y N 4 A1JSW C5 C6 DOUB Y N 5 A1JSW C1 C6 SING Y N 6 A1JSW C5 C7 SING N N 7 A1JSW C7 O1 SING N N 8 A1JSW O1 C8 SING N N 9 A1JSW C8 N1 SING N N 10 A1JSW C8 O2 DOUB N N 11 A1JSW N1 C9 SING N N 12 A1JSW C9 C10 SING N N 13 A1JSW C9 C11 SING N N 14 A1JSW C11 C12 SING N N 15 A1JSW C12 C13 SING N N 16 A1JSW C12 C14 SING N N 17 A1JSW C10 O3 DOUB N N 18 A1JSW C10 N2 SING N N 19 A1JSW N2 C15 SING N N 20 A1JSW C15 C16 SING N N 21 A1JSW C15 C17 SING N N 22 A1JSW C17 C18 SING N N 23 A1JSW C18 C19 SING N N 24 A1JSW C19 C20 SING N N 25 A1JSW C20 N3 SING N N 26 A1JSW N3 C21 SING N N 27 A1JSW C18 C21 SING N N 28 A1JSW C16 O4 SING N N 29 A1JSW C16 C22 SING N N 30 A1JSW C22 N4 DOUB Y N 31 A1JSW N4 C23 SING Y N 32 A1JSW C23 C24 DOUB Y N 33 A1JSW C24 S1 SING Y N 34 A1JSW C22 S1 SING Y N 35 A1JSW C23 C25 SING N N 36 A1JSW C25 C26 DOUB N N 37 A1JSW C25 O5 SING N N 38 A1JSW O5 C27 SING N N 39 A1JSW C21 O6 DOUB N N 40 A1JSW N1 H8 SING N N 41 A1JSW N3 H29 SING N N 42 A1JSW C4 H4 SING N N 43 A1JSW C6 H5 SING N N 44 A1JSW C7 H6 SING N N 45 A1JSW C7 H7 SING N N 46 A1JSW C13 H13 SING N N 47 A1JSW C13 H14 SING N N 48 A1JSW C13 H15 SING N N 49 A1JSW C15 H20 SING N N 50 A1JSW C17 H22 SING N N 51 A1JSW C17 H23 SING N N 52 A1JSW C20 H27 SING N N 53 A1JSW C20 H28 SING N N 54 A1JSW C24 H31 SING N N 55 A1JSW C26 H32 SING N N 56 A1JSW C26 H33 SING N N 57 A1JSW C1 H1 SING N N 58 A1JSW C2 H2 SING N N 59 A1JSW C3 H3 SING N N 60 A1JSW C9 H9 SING N N 61 A1JSW C11 H10 SING N N 62 A1JSW C11 H11 SING N N 63 A1JSW C12 H12 SING N N 64 A1JSW C14 H16 SING N N 65 A1JSW C14 H17 SING N N 66 A1JSW C14 H18 SING N N 67 A1JSW N2 H19 SING N N 68 A1JSW C16 H21 SING N N 69 A1JSW C18 H24 SING N N 70 A1JSW C19 H25 SING N N 71 A1JSW C19 H26 SING N N 72 A1JSW O4 H30 SING N N 73 A1JSW C27 H34 SING N N 74 A1JSW C27 H35 SING N N 75 A1JSW C27 H36 SING N N 76 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JSW InChI InChI 1.06 "InChI=1S/C27H36N4O6S/c1-16(2)12-21(31-27(35)37-14-18-8-6-5-7-9-18)25(34)29-20(13-19-10-11-28-24(19)33)23(32)26-30-22(15-38-26)17(3)36-4/h5-9,15-16,19-21,23,32H,3,10-14H2,1-2,4H3,(H,28,33)(H,29,34)(H,31,35)/t19-,20-,21-,23-/m0/s1" A1JSW InChIKey InChI 1.06 LWGFATQVPSGUTC-FKEBYFGASA-N A1JSW SMILES_CANONICAL CACTVS 3.385 "COC(=C)c1csc(n1)[C@@H](O)[C@H](C[C@@H]2CCNC2=O)NC(=O)[C@H](CC(C)C)NC(=O)OCc3ccccc3" A1JSW SMILES CACTVS 3.385 "COC(=C)c1csc(n1)[CH](O)[CH](C[CH]2CCNC2=O)NC(=O)[CH](CC(C)C)NC(=O)OCc3ccccc3" A1JSW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](c2nc(cs2)C(=C)OC)O)NC(=O)OCc3ccccc3" A1JSW SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(c2nc(cs2)C(=C)OC)O)NC(=O)OCc3ccccc3" # _pdbx_chem_comp_identifier.comp_id A1JSW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(phenylmethyl) ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[4-(1-methoxyethenyl)-1,3-thiazol-2-yl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JSW "Create component" 2025-10-21 PDBE A1JSW "Modify PCM" 2025-10-21 PDBE A1JSW "Initial release" 2026-08-05 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1JSW _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C16 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #