data_A1JTC # _chem_comp.id A1JTC _chem_comp.name "(2~{S},4~{R})-1-[(2~{S})-2-[2-[2-[2-[2-[2-[2-[2-[[(2~{S})-3,3-dimethyl-1-[(2~{S},4~{R})-2-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methylcarbamoyl]-4-oxidanyl-pyrrolidin-1-yl]-1-oxidanylidene-butan-2-yl]amino]-2-oxidanylidene-ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanoylamino]-3,3-dimethyl-butanoyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C58 H82 N8 O14 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "homoPROTAC CM11" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-29 _chem_comp.pdbx_modified_date 2025-11-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 1179.447 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JTC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9T32 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JTC O2 O1 O 0 1 N N N N N N 219.648 220.418 206.318 3.432 5.252 -1.661 O2 A1JTC 1 A1JTC C3 C1 C 0 1 N N N N N N 218.800 221.502 205.951 4.303 6.385 -1.700 C3 A1JTC 2 A1JTC C4 C2 C 0 1 N N N N N N 220.694 220.760 207.218 2.162 5.474 -2.276 C4 A1JTC 3 A1JTC C5 C3 C 0 1 N N N N N N 221.736 221.689 206.577 1.318 4.202 -2.176 C5 A1JTC 4 A1JTC C6 C4 C 0 1 N N N N N N 224.051 222.137 206.556 0.243 2.753 -0.598 C6 A1JTC 5 A1JTC C7 C5 C 0 1 N N N N N N 225.376 221.756 207.239 -0.001 2.558 0.900 C7 A1JTC 6 A1JTC C8 C6 C 0 1 N N N N N N 225.674 223.840 208.490 -1.082 3.551 2.795 C8 A1JTC 7 A1JTC C10 C7 C 0 1 N N N N N N 216.393 219.847 203.655 7.549 4.617 -1.212 C10 A1JTC 8 A1JTC CAA C8 C 0 1 N N N N N N 228.648 223.245 202.734 -7.315 4.168 1.964 CAA A1JTC 9 A1JTC CAV C9 C 0 1 N N N N N N 228.660 224.067 201.445 -7.923 2.909 2.529 CAV A1JTC 10 A1JTC OAF O2 O 0 1 N N N N N N 228.615 225.297 201.444 -7.341 2.290 3.395 OAF A1JTC 11 A1JTC NAT N1 N 0 1 N N N N N N 228.697 223.358 200.318 -9.113 2.472 2.072 NAT A1JTC 12 A1JTC CZE C10 C 0 1 N N S N N N 228.437 223.858 198.972 -9.704 1.249 2.621 CZE A1JTC 13 A1JTC CZG C11 C 0 1 N N N N N N 229.002 222.809 197.931 -10.482 1.585 3.895 CZG A1JTC 14 A1JTC CZD C12 C 0 1 N N N N N N 230.543 222.744 198.052 -11.538 2.647 3.582 CZD A1JTC 15 A1JTC CWE C13 C 0 1 N N N N N N 228.680 223.114 196.451 -11.168 0.324 4.422 CWE A1JTC 16 A1JTC CZC C14 C 0 1 N N N N N N 228.484 221.377 198.194 -9.517 2.122 4.955 CZC A1JTC 17 A1JTC CZX C15 C 0 1 N N N N N N 226.917 224.195 198.824 -10.639 0.643 1.607 CZX A1JTC 18 A1JTC OZH O3 O 0 1 N N N N N N 226.092 223.414 199.312 -11.238 1.359 0.832 OZH A1JTC 19 A1JTC NZ N2 N 0 1 N N N N N N 226.513 225.325 198.174 -10.810 -0.693 1.561 NZ A1JTC 20 A1JTC CZ2 C16 C 0 1 N N N N N N 227.392 226.338 197.538 -10.076 -1.681 2.371 CZ2 A1JTC 21 A1JTC CGZ C17 C 0 1 N N R N N N 226.476 227.559 197.238 -10.153 -2.997 1.557 CGZ A1JTC 22 A1JTC OZ1 O4 O 0 1 N N N N N N 226.307 228.373 198.378 -9.171 -3.016 0.519 OZ1 A1JTC 23 A1JTC CZB C18 C 0 1 N N N N N N 225.143 226.899 196.987 -11.585 -2.914 0.966 CZB A1JTC 24 A1JTC CZA C19 C 0 1 N N S N N N 225.082 225.693 197.959 -11.764 -1.405 0.698 CZA A1JTC 25 A1JTC CZ1 C20 C 0 1 N N N N N N 224.129 224.627 197.335 -13.175 -0.990 1.030 CZ1 A1JTC 26 A1JTC OW1 O5 O 0 1 N N N N N N 224.505 223.833 196.469 -13.376 -0.166 1.897 OW1 A1JTC 27 A1JTC NZS N3 N 0 1 N N N N N N 222.843 224.732 197.698 -14.212 -1.533 0.363 NZS A1JTC 28 A1JTC CZO C21 C 0 1 N N N N N N 221.719 224.009 197.120 -15.583 -1.129 0.685 CZO A1JTC 29 A1JTC CZY C22 C 0 1 Y N N N N N 221.265 224.496 195.725 -16.548 -1.879 -0.197 CZY A1JTC 30 A1JTC CZK C23 C 0 1 Y N N N N N 221.479 225.823 195.318 -17.055 -3.098 0.216 CZK A1JTC 31 A1JTC CZM C24 C 0 1 Y N N N N N 221.017 226.254 194.081 -17.939 -3.788 -0.586 CZM A1JTC 32 A1JTC CZJ C25 C 0 1 Y N N N N N 220.629 223.616 194.857 -16.927 -1.342 -1.415 CZJ A1JTC 33 A1JTC CZL C26 C 0 1 Y N N N N N 220.190 224.049 193.603 -17.811 -2.023 -2.227 CZL A1JTC 34 A1JTC CXA C27 C 0 1 Y N N N N N 220.332 225.388 193.231 -18.321 -3.255 -1.818 CXA A1JTC 35 A1JTC CXB C28 C 0 1 Y N N N N N 219.738 225.902 191.947 -19.269 -3.990 -2.684 CXB A1JTC 36 A1JTC SXU S1 S 0 1 Y N N N N N 220.499 227.229 191.096 -20.788 -4.722 -2.173 SXU A1JTC 37 A1JTC CXN C29 C 0 1 Y N N N N N 219.227 227.144 189.942 -21.077 -5.259 -3.770 CXN A1JTC 38 A1JTC NXR N4 N 0 1 Y N N N N N 218.314 226.220 190.140 -20.111 -4.900 -4.547 NXR A1JTC 39 A1JTC CXZ C30 C 0 1 Y N N N N N 218.551 225.575 191.279 -19.126 -4.216 -4.007 CXZ A1JTC 40 A1JTC CWB C31 C 0 1 N N N N N N 217.449 224.621 191.698 -17.937 -3.733 -4.796 CWB A1JTC 41 A1JTC OX1 O6 O 0 1 N N N N N N 228.793 224.082 203.871 -6.063 4.421 2.605 OX1 A1JTC 42 A1JTC CX1 C32 C 0 1 N N N N N N 228.368 223.420 205.050 -5.400 5.598 2.139 CX1 A1JTC 43 A1JTC CX2 C33 C 0 1 N N N N N N 228.612 224.331 206.257 -4.078 5.769 2.890 CX2 A1JTC 44 A1JTC CBE C34 C 0 1 N N S N N N 216.761 220.028 199.812 9.952 1.975 -2.590 CBE A1JTC 45 A1JTC CBG C35 C 0 1 N N N N N N 216.163 221.257 199.006 10.727 2.629 -3.735 CBG A1JTC 46 A1JTC CAD C36 C 0 1 N N N N N N 214.635 221.349 199.268 11.778 3.581 -3.161 CAD A1JTC 47 A1JTC CAE C37 C 0 1 N N N N N N 216.316 221.129 197.483 11.419 1.546 -4.566 CAE A1JTC 48 A1JTC CAC C38 C 0 1 N N N N N N 216.786 222.602 199.440 9.759 3.413 -4.624 CAC A1JTC 49 A1JTC CAX C39 C 0 1 N N N N N N 218.247 219.705 199.435 10.891 1.135 -1.762 CAX A1JTC 50 A1JTC OAH O7 O 0 1 N N N N N N 219.148 220.340 199.993 11.526 1.644 -0.863 OAH A1JTC 51 A1JTC N N5 N 0 1 N N N N N N 218.533 218.771 198.486 11.024 -0.181 -2.022 N A1JTC 52 A1JTC CD2 C40 C 0 1 N N N N N N 217.577 217.862 197.813 10.389 -0.905 -3.138 CD2 A1JTC 53 A1JTC CG C41 C 0 1 N N R N N N 218.433 216.645 197.412 10.323 -2.379 -2.666 CG A1JTC 54 A1JTC OD1 O8 O 0 1 N N N N N N 218.643 215.788 198.509 9.205 -2.591 -1.802 OD1 A1JTC 55 A1JTC CB C42 C 0 1 N N N N N N 219.764 217.268 197.060 11.660 -2.519 -1.892 CB A1JTC 56 A1JTC CA C43 C 0 1 N N S N N N 219.912 218.508 197.981 11.833 -1.130 -1.242 CA A1JTC 57 A1JTC C C44 C 0 1 N N N N N N 220.590 219.662 197.191 13.284 -0.725 -1.276 C A1JTC 58 A1JTC O O9 O 0 1 N N N N N N 219.932 220.569 196.684 13.623 0.269 -1.882 O A1JTC 59 A1JTC NAS N6 N 0 1 N N N N N N 221.917 219.554 197.038 14.206 -1.469 -0.632 NAS A1JTC 60 A1JTC CAO C45 C 0 1 N N N N N N 222.748 220.491 196.271 15.616 -1.076 -0.664 CAO A1JTC 61 A1JTC CAY C46 C 0 1 Y N N N N N 223.445 219.930 195.030 16.432 -2.066 0.127 CAY A1JTC 62 A1JTC CAK C47 C 0 1 Y N N N N N 223.428 218.568 194.701 16.966 -3.177 -0.502 CAK A1JTC 63 A1JTC CAM C48 C 0 1 Y N N N N N 224.143 218.114 193.598 17.713 -4.087 0.217 CAM A1JTC 64 A1JTC CAJ C49 C 0 1 Y N N N N N 224.170 220.824 194.236 16.649 -1.857 1.478 CAJ A1JTC 65 A1JTC CAL C50 C 0 1 Y N N N N N 224.903 220.361 193.158 17.395 -2.759 2.207 CAL A1JTC 66 A1JTC CBA C51 C 0 1 Y N N N N N 224.903 219.004 192.822 17.931 -3.885 1.580 CBA A1JTC 67 A1JTC CBB C52 C 0 1 Y N N N N N 225.740 218.538 191.675 18.732 -4.856 2.356 CBB A1JTC 68 A1JTC SAU S2 S 0 1 Y N N N N N 225.148 217.296 190.594 20.293 -5.524 1.887 SAU A1JTC 69 A1JTC CAN C53 C 0 1 Y N N N N N 226.616 217.448 189.693 20.343 -6.444 3.327 CAN A1JTC 70 A1JTC NAR N7 N 0 1 Y N N N N N 227.469 218.313 190.172 19.284 -6.231 4.034 NAR A1JTC 71 A1JTC CAZ C54 C 0 1 Y N N N N N 227.022 218.920 191.257 18.399 -5.385 3.553 CAZ A1JTC 72 A1JTC CAB C55 C 0 1 N N N N N N 227.975 219.902 191.904 17.120 -5.043 4.273 CAB A1JTC 73 A1JTC N1 N8 N 0 1 N N N N N N 216.694 220.303 201.257 9.355 3.014 -1.747 N1 A1JTC 74 A1JTC C1 C56 C 0 1 N N N N N N 216.517 219.375 202.205 8.163 3.548 -2.078 C1 A1JTC 75 A1JTC O1 O10 O 0 1 N N N N N N 216.383 218.183 201.942 7.583 3.167 -3.073 O1 A1JTC 76 A1JTC C2 C57 C 0 1 N N N N N N 217.465 220.955 205.424 5.626 6.035 -1.017 C2 A1JTC 77 A1JTC O3 O11 O 0 1 N N N N N N 227.838 223.945 207.384 -3.202 4.688 2.564 O3 A1JTC 78 A1JTC O4 O12 O 0 1 N N N N N N 217.564 220.538 204.068 6.295 5.019 -1.767 O4 A1JTC 79 A1JTC O5 O13 O 0 1 N N N N N N 222.982 221.483 207.219 1.031 3.927 -0.803 O5 A1JTC 80 A1JTC O6 O14 O 0 1 N N N N N N 225.617 222.412 208.482 -0.794 3.637 1.398 O6 A1JTC 81 A1JTC C9 C58 C 0 1 N N N N N N 226.514 224.463 207.360 -1.932 4.752 3.215 C9 A1JTC 82 A1JTC H7 H1 H 0 1 N N N N N N 219.287 222.098 205.165 4.491 6.663 -2.737 H7 A1JTC 83 A1JTC H6 H2 H 0 1 N N N N N N 218.614 222.136 206.831 3.835 7.221 -1.179 H6 A1JTC 84 A1JTC H9 H3 H 0 1 N N N N N N 220.257 221.267 208.091 1.650 6.291 -1.767 H9 A1JTC 85 A1JTC H8 H4 H 0 1 N N N N N N 221.196 219.837 207.544 2.306 5.733 -3.325 H8 A1JTC 86 A1JTC H10 H5 H 0 1 N N N N N N 221.829 221.458 205.505 0.384 4.341 -2.721 H10 A1JTC 87 A1JTC H11 H6 H 0 1 N N N N N N 221.424 222.737 206.701 1.869 3.365 -2.606 H11 A1JTC 88 A1JTC H12 H7 H 0 1 N N N N N N 224.077 221.824 205.502 0.772 1.886 -0.995 H12 A1JTC 89 A1JTC H13 H8 H 0 1 N N N N N N 223.908 223.226 206.612 -0.712 2.862 -1.110 H13 A1JTC 90 A1JTC H15 H9 H 0 1 N N N N N N 225.368 220.671 207.420 -0.525 1.616 1.063 H15 A1JTC 91 A1JTC H14 H10 H 0 1 N N N N N N 226.199 222.007 206.554 0.955 2.537 1.424 H14 A1JTC 92 A1JTC H16 H11 H 0 1 N N N N N N 226.104 224.159 209.451 -1.628 2.630 2.997 H16 A1JTC 93 A1JTC H17 H12 H 0 1 N N N N N N 224.647 224.223 208.403 -0.149 3.552 3.358 H17 A1JTC 94 A1JTC H20 H13 H 0 1 N N N N N N 215.528 220.521 203.741 7.392 4.225 -0.207 H20 A1JTC 95 A1JTC H21 H14 H 0 1 N N N N N N 216.243 218.973 204.306 8.218 5.476 -1.166 H21 A1JTC 96 A1JTC HAA1 H15 H 0 0 N N N N N N 227.694 222.702 202.806 -7.158 4.045 0.893 HAA1 A1JTC 97 A1JTC HAA2 H16 H 0 0 N N N N N N 229.479 222.524 202.709 -7.989 5.006 2.139 HAA2 A1JTC 98 A1JTC HN H17 H 0 1 N N N N N N 228.925 222.388 200.403 -9.579 2.967 1.380 HN A1JTC 99 A1JTC HXBE H18 H 0 0 N N N N N N 228.997 224.794 198.828 -8.913 0.537 2.856 HXBE A1JTC 100 A1JTC HXD3 H19 H 0 0 N N N N N N 230.821 222.528 199.094 -11.049 3.546 3.207 HXD3 A1JTC 101 A1JTC HXD1 H20 H 0 0 N N N N N N 230.929 221.949 197.397 -12.225 2.265 2.827 HXD1 A1JTC 102 A1JTC HXD2 H21 H 0 0 N N N N N N 230.975 223.709 197.750 -12.092 2.887 4.490 HXD2 A1JTC 103 A1JTC HXE3 H22 H 0 0 N N N N N N 227.590 223.170 196.316 -11.805 -0.096 3.644 HXE3 A1JTC 104 A1JTC HXE1 H23 H 0 0 N N N N N N 229.134 224.075 196.168 -10.412 -0.409 4.707 HXE1 A1JTC 105 A1JTC HXE2 H24 H 0 0 N N N N N N 229.087 222.314 195.815 -11.775 0.576 5.292 HXE2 A1JTC 106 A1JTC HXC1 H25 H 0 0 N N N N N N 228.686 221.100 199.239 -10.072 2.362 5.862 HXC1 A1JTC 107 A1JTC HXC3 H26 H 0 0 N N N N N N 227.401 221.339 198.007 -8.765 1.366 5.178 HXC3 A1JTC 108 A1JTC HXC2 H27 H 0 0 N N N N N N 228.997 220.673 197.523 -9.029 3.021 4.579 HXC2 A1JTC 109 A1JTC HX21 H28 H 0 0 N N N N N N 227.822 225.942 196.606 -9.038 -1.373 2.497 HX21 A1JTC 110 A1JTC HX22 H29 H 0 0 N N N N N N 228.203 226.626 198.223 -10.554 -1.806 3.343 HX22 A1JTC 111 A1JTC HXG H30 H 0 1 N N N N N N 226.830 228.112 196.356 -10.047 -3.865 2.207 HXG A1JTC 112 A1JTC HZD1 H31 H 0 0 N N N N N N 227.125 228.813 198.578 -8.260 -2.969 0.839 HZD1 A1JTC 113 A1JTC HY2 H32 H 0 1 N N N N N N 224.322 227.601 197.195 -11.653 -3.484 0.040 HY2 A1JTC 114 A1JTC HY1 H33 H 0 1 N N N N N N 225.076 226.555 195.944 -12.322 -3.264 1.690 HY1 A1JTC 115 A1JTC HYZ H34 H 0 1 N N N N N N 224.648 226.033 198.911 -11.547 -1.186 -0.347 HYZ A1JTC 116 A1JTC HZAS H35 H 0 0 N N N N N N 222.635 225.370 198.439 -14.050 -2.192 -0.331 HZAS A1JTC 117 A1JTC HZO1 H36 H 0 0 N N N N N N 220.865 224.103 197.807 -15.793 -1.358 1.730 HZO1 A1JTC 118 A1JTC HZO2 H37 H 0 0 N N N N N N 222.005 222.950 197.034 -15.694 -0.058 0.518 HZO2 A1JTC 119 A1JTC HZAK H38 H 0 0 N N N N N N 222.003 226.509 195.967 -16.758 -3.509 1.169 HZAK A1JTC 120 A1JTC HZAM H39 H 0 0 N N N N N N 221.191 227.275 193.774 -18.334 -4.740 -0.263 HZAM A1JTC 121 A1JTC HZAJ H40 H 0 0 N N N N N N 220.473 222.589 195.154 -16.530 -0.388 -1.730 HZAJ A1JTC 122 A1JTC HZAL H41 H 0 0 N N N N N N 219.739 223.346 192.919 -18.106 -1.603 -3.177 HZAL A1JTC 123 A1JTC HZAN H42 H 0 0 N N N N N N 219.181 227.816 189.098 -21.944 -5.823 -4.083 HZAN A1JTC 124 A1JTC HZB2 H43 H 0 0 N N N N N N 216.639 224.647 190.955 -18.106 -2.705 -5.117 HZB2 A1JTC 125 A1JTC HZB3 H44 H 0 0 N N N N N N 217.853 223.600 191.764 -17.045 -3.776 -4.172 HZB3 A1JTC 126 A1JTC HZB1 H45 H 0 0 N N N N N N 217.056 224.924 192.680 -17.799 -4.369 -5.671 HZB1 A1JTC 127 A1JTC HZ1 H46 H 0 1 N N N N N N 227.295 223.188 204.975 -5.202 5.506 1.071 HZ1 A1JTC 128 A1JTC HZ2 H47 H 0 1 N N N N N N 228.937 222.487 205.173 -6.034 6.466 2.318 HZ2 A1JTC 129 A1JTC HZ3 H48 H 0 1 N N N N N N 229.678 224.285 206.526 -3.615 6.712 2.599 HZ3 A1JTC 130 A1JTC HZ4 H49 H 0 1 N N N N N N 228.347 225.363 205.982 -4.267 5.772 3.963 HZ4 A1JTC 131 A1JTC HCBE H50 H 0 0 N N N N N N 216.150 219.143 199.581 9.164 1.342 -2.999 HCBE A1JTC 132 A1JTC HAD3 H51 H 0 0 N N N N N N 214.453 221.443 200.349 11.285 4.352 -2.569 HAD3 A1JTC 133 A1JTC HAD2 H52 H 0 0 N N N N N N 214.226 222.229 198.749 12.467 3.023 -2.528 HAD2 A1JTC 134 A1JTC HAD1 H53 H 0 0 N N N N N N 214.143 220.440 198.891 12.330 4.047 -3.977 HAD1 A1JTC 135 A1JTC HAE3 H54 H 0 0 N N N N N N 217.383 221.059 197.226 12.064 0.950 -3.921 HAE3 A1JTC 136 A1JTC HAE1 H55 H 0 0 N N N N N N 215.795 220.224 197.137 10.667 0.903 -5.023 HAE1 A1JTC 137 A1JTC HAE2 H56 H 0 0 N N N N N N 215.879 222.013 196.995 12.019 2.015 -5.346 HAE2 A1JTC 138 A1JTC HAC3 H57 H 0 0 N N N N N N 216.689 222.717 200.530 10.312 3.879 -5.440 HAC3 A1JTC 139 A1JTC HAC1 H58 H 0 0 N N N N N N 217.850 222.619 199.163 9.011 2.734 -5.033 HAC1 A1JTC 140 A1JTC HAC2 H59 H 0 0 N N N N N N 216.263 223.428 198.936 9.266 4.184 -4.032 HAC2 A1JTC 141 A1JTC HD21 H60 H 0 0 N N N N N N 217.141 218.342 196.925 9.386 -0.519 -3.319 HD21 A1JTC 142 A1JTC HD22 H61 H 0 0 N N N N N N 216.772 217.563 198.501 10.996 -0.820 -4.039 HD22 A1JTC 143 A1JTC HG H62 H 0 1 N N N N N N 217.994 216.129 196.545 10.291 -3.060 -3.517 HG A1JTC 144 A1JTC HOD1 H63 H 0 0 N N N N N N 217.821 215.380 198.755 8.349 -2.419 -2.216 HOD1 A1JTC 145 A1JTC HB2 H64 H 0 1 N N N N N N 220.581 216.555 197.245 11.585 -3.296 -1.131 HB2 A1JTC 146 A1JTC HB1 H65 H 0 1 N N N N N N 219.776 217.573 196.003 12.483 -2.726 -2.576 HB1 A1JTC 147 A1JTC HA H66 H 0 1 N N N N N N 220.561 218.238 198.827 11.476 -1.155 -0.213 HA A1JTC 148 A1JTC HNAS H67 H 0 0 N N N N N N 222.374 218.780 197.477 13.935 -2.264 -0.147 HNAS A1JTC 149 A1JTC HAO2 H68 H 0 0 N N N N N N 223.527 220.876 196.946 15.966 -1.060 -1.696 HAO2 A1JTC 150 A1JTC HAO1 H69 H 0 0 N N N N N N 222.103 221.320 195.945 15.727 -0.083 -0.227 HAO1 A1JTC 151 A1JTC HCAK H70 H 0 0 N N N N N N 222.861 217.873 195.302 16.796 -3.332 -1.557 HCAK A1JTC 152 A1JTC HCAM H71 H 0 0 N N N N N N 224.113 217.067 193.336 18.129 -4.954 -0.275 HCAM A1JTC 153 A1JTC HCAJ H72 H 0 0 N N N N N N 224.158 221.879 194.465 16.233 -0.986 1.962 HCAJ A1JTC 154 A1JTC HCAL H73 H 0 0 N N N N N N 225.482 221.056 192.569 17.563 -2.595 3.261 HCAL A1JTC 155 A1JTC HCAN H74 H 0 0 N N N N N N 226.813 216.871 188.801 21.145 -7.113 3.605 HCAN A1JTC 156 A1JTC HAB2 H75 H 0 0 N N N N N N 228.912 219.937 191.329 17.306 -4.234 4.980 HAB2 A1JTC 157 A1JTC HAB1 H76 H 0 0 N N N N N N 227.517 220.902 191.919 16.370 -4.726 3.548 HAB1 A1JTC 158 A1JTC HAB3 H77 H 0 0 N N N N N N 228.188 219.581 192.934 16.759 -5.920 4.810 HAB3 A1JTC 159 A1JTC HN1 H78 H 0 1 N N N N N N 216.788 221.254 201.552 9.819 3.319 -0.951 HN1 A1JTC 160 A1JTC H5 H79 H 0 1 N N N N N N 216.702 221.744 205.499 6.256 6.924 -0.968 H5 A1JTC 161 A1JTC H4 H80 H 0 1 N N N N N N 217.165 220.095 206.040 5.430 5.673 -0.008 H4 A1JTC 162 A1JTC H19 H81 H 0 1 N N N N N N 226.549 225.554 207.494 -2.077 4.734 4.296 H19 A1JTC 163 A1JTC H18 H82 H 0 1 N N N N N N 226.050 224.227 206.391 -1.424 5.674 2.932 H18 A1JTC 164 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JTC CAN NAR DOUB Y N 1 A1JTC CAN SAU SING Y N 2 A1JTC CXN NXR DOUB Y N 3 A1JTC CXN SXU SING Y N 4 A1JTC NXR CXZ SING Y N 5 A1JTC NAR CAZ SING Y N 6 A1JTC SAU CBB SING Y N 7 A1JTC SXU CXB SING Y N 8 A1JTC CAZ CBB DOUB Y N 9 A1JTC CAZ CAB SING N N 10 A1JTC CXZ CWB SING N N 11 A1JTC CXZ CXB DOUB Y N 12 A1JTC CBB CBA SING N N 13 A1JTC CXB CXA SING N N 14 A1JTC CBA CAL DOUB Y N 15 A1JTC CBA CAM SING Y N 16 A1JTC CAL CAJ SING Y N 17 A1JTC CXA CZL DOUB Y N 18 A1JTC CXA CZM SING Y N 19 A1JTC CAM CAK DOUB Y N 20 A1JTC CZL CZJ SING Y N 21 A1JTC CZM CZK DOUB Y N 22 A1JTC CAJ CAY DOUB Y N 23 A1JTC CAK CAY SING Y N 24 A1JTC CZJ CZY DOUB Y N 25 A1JTC CAY CAO SING N N 26 A1JTC CZK CZY SING Y N 27 A1JTC CZY CZO SING N N 28 A1JTC CAO NAS SING N N 29 A1JTC CWE CZG SING N N 30 A1JTC OW1 CZ1 DOUB N N 31 A1JTC O C DOUB N N 32 A1JTC CZB CGZ SING N N 33 A1JTC CZB CZA SING N N 34 A1JTC NAS C SING N N 35 A1JTC CB CG SING N N 36 A1JTC CB CA SING N N 37 A1JTC CZO NZS SING N N 38 A1JTC C CA SING N N 39 A1JTC CGZ CZ2 SING N N 40 A1JTC CGZ OZ1 SING N N 41 A1JTC CZ1 NZS SING N N 42 A1JTC CZ1 CZA SING N N 43 A1JTC CG CD2 SING N N 44 A1JTC CG OD1 SING N N 45 A1JTC CAE CBG SING N N 46 A1JTC CZ2 NZ SING N N 47 A1JTC CD2 N SING N N 48 A1JTC CZG CZD SING N N 49 A1JTC CZG CZC SING N N 50 A1JTC CZG CZE SING N N 51 A1JTC CZA NZ SING N N 52 A1JTC CA N SING N N 53 A1JTC NZ CZX SING N N 54 A1JTC N CAX SING N N 55 A1JTC CZX CZE SING N N 56 A1JTC CZX OZH DOUB N N 57 A1JTC CZE NAT SING N N 58 A1JTC CBG CAD SING N N 59 A1JTC CBG CAC SING N N 60 A1JTC CBG CBE SING N N 61 A1JTC CAX CBE SING N N 62 A1JTC CAX OAH DOUB N N 63 A1JTC CBE N1 SING N N 64 A1JTC NAT CAV SING N N 65 A1JTC N1 C1 SING N N 66 A1JTC OAF CAV DOUB N N 67 A1JTC CAV CAA SING N N 68 A1JTC O1 C1 DOUB N N 69 A1JTC C1 C10 SING N N 70 A1JTC CAA OX1 SING N N 71 A1JTC C10 O4 SING N N 72 A1JTC OX1 CX1 SING N N 73 A1JTC O4 C2 SING N N 74 A1JTC CX1 CX2 SING N N 75 A1JTC C2 C3 SING N N 76 A1JTC C3 O2 SING N N 77 A1JTC CX2 O3 SING N N 78 A1JTC O2 C4 SING N N 79 A1JTC C6 O5 SING N N 80 A1JTC C6 C7 SING N N 81 A1JTC C5 C4 SING N N 82 A1JTC C5 O5 SING N N 83 A1JTC C7 O6 SING N N 84 A1JTC C9 O3 SING N N 85 A1JTC C9 C8 SING N N 86 A1JTC O6 C8 SING N N 87 A1JTC C3 H7 SING N N 88 A1JTC C3 H6 SING N N 89 A1JTC C4 H9 SING N N 90 A1JTC C4 H8 SING N N 91 A1JTC C5 H10 SING N N 92 A1JTC C5 H11 SING N N 93 A1JTC C6 H12 SING N N 94 A1JTC C6 H13 SING N N 95 A1JTC C7 H15 SING N N 96 A1JTC C7 H14 SING N N 97 A1JTC C8 H16 SING N N 98 A1JTC C8 H17 SING N N 99 A1JTC C10 H20 SING N N 100 A1JTC C10 H21 SING N N 101 A1JTC CAA HAA1 SING N N 102 A1JTC CAA HAA2 SING N N 103 A1JTC NAT HN SING N N 104 A1JTC CZE HXBE SING N N 105 A1JTC CZD HXD3 SING N N 106 A1JTC CZD HXD1 SING N N 107 A1JTC CZD HXD2 SING N N 108 A1JTC CWE HXE3 SING N N 109 A1JTC CWE HXE1 SING N N 110 A1JTC CWE HXE2 SING N N 111 A1JTC CZC HXC1 SING N N 112 A1JTC CZC HXC3 SING N N 113 A1JTC CZC HXC2 SING N N 114 A1JTC CZ2 HX21 SING N N 115 A1JTC CZ2 HX22 SING N N 116 A1JTC CGZ HXG SING N N 117 A1JTC OZ1 HZD1 SING N N 118 A1JTC CZB HY2 SING N N 119 A1JTC CZB HY1 SING N N 120 A1JTC CZA HYZ SING N N 121 A1JTC NZS HZAS SING N N 122 A1JTC CZO HZO1 SING N N 123 A1JTC CZO HZO2 SING N N 124 A1JTC CZK HZAK SING N N 125 A1JTC CZM HZAM SING N N 126 A1JTC CZJ HZAJ SING N N 127 A1JTC CZL HZAL SING N N 128 A1JTC CXN HZAN SING N N 129 A1JTC CWB HZB2 SING N N 130 A1JTC CWB HZB3 SING N N 131 A1JTC CWB HZB1 SING N N 132 A1JTC CX1 HZ1 SING N N 133 A1JTC CX1 HZ2 SING N N 134 A1JTC CX2 HZ3 SING N N 135 A1JTC CX2 HZ4 SING N N 136 A1JTC CBE HCBE SING N N 137 A1JTC CAD HAD3 SING N N 138 A1JTC CAD HAD2 SING N N 139 A1JTC CAD HAD1 SING N N 140 A1JTC CAE HAE3 SING N N 141 A1JTC CAE HAE1 SING N N 142 A1JTC CAE HAE2 SING N N 143 A1JTC CAC HAC3 SING N N 144 A1JTC CAC HAC1 SING N N 145 A1JTC CAC HAC2 SING N N 146 A1JTC CD2 HD21 SING N N 147 A1JTC CD2 HD22 SING N N 148 A1JTC CG HG SING N N 149 A1JTC OD1 HOD1 SING N N 150 A1JTC CB HB2 SING N N 151 A1JTC CB HB1 SING N N 152 A1JTC CA HA SING N N 153 A1JTC NAS HNAS SING N N 154 A1JTC CAO HAO2 SING N N 155 A1JTC CAO HAO1 SING N N 156 A1JTC CAK HCAK SING N N 157 A1JTC CAM HCAM SING N N 158 A1JTC CAJ HCAJ SING N N 159 A1JTC CAL HCAL SING N N 160 A1JTC CAN HCAN SING N N 161 A1JTC CAB HAB2 SING N N 162 A1JTC CAB HAB1 SING N N 163 A1JTC CAB HAB3 SING N N 164 A1JTC N1 HN1 SING N N 165 A1JTC C2 H5 SING N N 166 A1JTC C2 H4 SING N N 167 A1JTC C9 H19 SING N N 168 A1JTC C9 H18 SING N N 169 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JTC InChI InChI 1.06 "InChI=1S/C58H82N8O14S2/c1-37-49(81-35-61-37)41-13-9-39(10-14-41)29-59-53(71)45-27-43(67)31-65(45)55(73)51(57(3,4)5)63-47(69)33-79-25-23-77-21-19-75-17-18-76-20-22-78-24-26-80-34-48(70)64-52(58(6,7)8)56(74)66-32-44(68)28-46(66)54(72)60-30-40-11-15-42(16-12-40)50-38(2)62-36-82-50/h9-16,35-36,43-46,51-52,67-68H,17-34H2,1-8H3,(H,59,71)(H,60,72)(H,63,69)(H,64,70)/t43-,44-,45+,46+,51-,52-/m1/s1" A1JTC InChIKey InChI 1.06 WGJCHHJGGFCCRS-DEYDLUNASA-N A1JTC SMILES_CANONICAL CACTVS 3.385 "Cc1ncsc1c2ccc(CNC(=O)[C@@H]3C[C@@H](O)CN3C(=O)[C@@H](NC(=O)COCCOCCOCCOCCOCCOCC(=O)N[C@H](C(=O)N4C[C@H](O)C[C@H]4C(=O)NCc5ccc(cc5)c6scnc6C)C(C)(C)C)C(C)(C)C)cc2" A1JTC SMILES CACTVS 3.385 "Cc1ncsc1c2ccc(CNC(=O)[CH]3C[CH](O)CN3C(=O)[CH](NC(=O)COCCOCCOCCOCCOCCOCC(=O)N[CH](C(=O)N4C[CH](O)C[CH]4C(=O)NCc5ccc(cc5)c6scnc6C)C(C)(C)C)C(C)(C)C)cc2" A1JTC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2ccc(cc2)CNC(=O)[C@@H]3C[C@H](CN3C(=O)[C@H](C(C)(C)C)NC(=O)COCCOCCOCCOCCOCCOCC(=O)N[C@H](C(=O)N4C[C@@H](C[C@H]4C(=O)NCc5ccc(cc5)c6c(ncs6)C)O)C(C)(C)C)O" A1JTC SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(scn1)c2ccc(cc2)CNC(=O)C3CC(CN3C(=O)C(C(C)(C)C)NC(=O)COCCOCCOCCOCCOCCOCC(=O)NC(C(=O)N4CC(CC4C(=O)NCc5ccc(cc5)c6c(ncs6)C)O)C(C)(C)C)O" # _pdbx_chem_comp_identifier.comp_id A1JTC _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S},4~{R})-1-[(2~{S})-2-[2-[2-[2-[2-[2-[2-[2-[[(2~{S})-3,3-dimethyl-1-[(2~{S},4~{R})-2-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methylcarbamoyl]-4-oxidanyl-pyrrolidin-1-yl]-1-oxidanylidene-butan-2-yl]amino]-2-oxidanylidene-ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanoylamino]-3,3-dimethyl-butanoyl]-~{N}-[[4-(4-methyl-1,3-thiazol-5-yl)phenyl]methyl]-4-oxidanyl-pyrrolidine-2-carboxamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1JTC _pdbx_chem_comp_synonyms.name "homoPROTAC CM11" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JTC "Create component" 2025-10-29 PDBE A1JTC "Modify name" 2025-10-31 PDBE A1JTC "Modify synonyms" 2025-10-31 PDBE A1JTC "Initial release" 2025-12-03 RCSB #