data_A1JTG # _chem_comp.id A1JTG _chem_comp.name "1-(1-(4-chlorobenzyl)piperidin-4-yl)-3-(9-fluoro-5,6,8,9,10,11-hexahydro-7H-5,9:7,11-dimethanobenzo[9]annulen-7-yl)urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H33 Cl F N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-29 _chem_comp.pdbx_modified_date 2026-11-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 482.033 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JTG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9T3V _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JTG C1 C1 C 0 1 N N N N N N -26.003 -19.302 39.900 -6.242 -0.876 -0.175 C1 A1JTG 1 A1JTG C2 C2 C 0 1 N N N N N N -23.879 -18.584 37.203 -3.058 0.475 -1.066 C2 A1JTG 2 A1JTG C3 C3 C 0 1 N N R N N N -26.340 -19.912 38.551 -5.235 -0.461 0.882 C3 A1JTG 3 A1JTG C7 C4 C 0 1 Y N N N N N -25.231 -23.446 37.722 -5.773 2.939 2.438 C7 A1JTG 4 A1JTG C8 C5 C 0 1 Y N N N N N -23.982 -23.312 37.506 -5.326 3.778 1.434 C8 A1JTG 5 A1JTG C9 C6 C 0 1 Y N N N N N -23.321 -22.162 37.583 -4.850 3.245 0.251 C9 A1JTG 6 A1JTG C10 C7 C 0 1 Y N N N N N -24.157 -20.875 37.960 -4.817 1.879 0.064 C10 A1JTG 7 A1JTG C11 C8 C 0 1 Y N N N N N -25.432 -21.020 38.185 -5.269 1.030 1.080 C11 A1JTG 8 A1JTG C12 C9 C 0 1 Y N N N N N -26.049 -22.464 38.046 -5.743 1.569 2.258 C12 A1JTG 9 A1JTG C13 C10 C 0 1 N N N N N N -24.957 -17.217 38.900 -4.356 -1.581 -1.657 C13 A1JTG 10 A1JTG C14 C11 C 0 1 N N N N N N -23.506 -19.085 39.518 -5.432 0.649 -2.002 C14 A1JTG 11 A1JTG C15 C12 C 0 1 N N S N N N -23.421 -19.607 38.055 -4.300 1.297 -1.224 C15 A1JTG 12 A1JTG C16 C13 C 0 1 N N N N N N -25.990 -15.616 36.369 -1.038 -1.411 -0.024 C16 A1JTG 13 A1JTG C19 C14 C 0 1 N N N N N N -26.993 -11.771 33.255 3.375 -2.584 1.752 C19 A1JTG 14 A1JTG C20 C15 C 0 1 N N N N N N -28.782 -12.886 33.802 3.296 -0.326 0.876 C20 A1JTG 15 A1JTG C21 C16 C 0 1 N N N N N N -28.019 -14.109 34.419 2.065 -0.658 0.030 C21 A1JTG 16 A1JTG C27 C17 C 0 1 N N N N N N -28.816 -11.436 32.165 5.375 -1.221 1.733 C27 A1JTG 17 A1JTG C01 C18 C 0 1 Y N N N N N -29.826 -12.150 31.252 6.218 -0.327 0.860 C01 A1JTG 18 A1JTG C02 C19 C 0 1 Y N N N N N -29.386 -13.175 30.434 7.109 -0.881 -0.040 C02 A1JTG 19 A1JTG C03 C20 C 0 1 Y N N N N N -30.287 -13.841 29.615 7.878 -0.062 -0.845 C03 A1JTG 20 A1JTG C04 C21 C 0 1 Y N N N N N -31.626 -13.481 29.633 7.755 1.313 -0.750 C04 A1JTG 21 A1JTG C05 C22 C 0 1 Y N N N N N -32.074 -12.462 30.463 6.863 1.867 0.151 C05 A1JTG 22 A1JTG C06 C23 C 0 1 Y N N N N N -31.172 -11.795 31.280 6.095 1.046 0.955 C06 A1JTG 23 A1JTG C17 C24 C 0 1 N N N N N N -26.672 -13.597 34.929 1.255 -1.756 0.725 C17 A1JTG 24 A1JTG C18 C25 C 0 1 N N N N N N -26.031 -12.779 33.837 2.146 -2.984 0.932 C18 A1JTG 25 A1JTG C4 C26 C 0 1 N N N N N N -26.335 -18.744 37.284 -3.855 -1.024 0.731 C4 A1JTG 26 A1JTG C5 C27 C 0 1 N N N N N N -24.784 -18.333 39.899 -5.660 -0.793 -1.578 C5 A1JTG 27 A1JTG C6 C28 C 0 1 N N N N N N -24.984 -17.770 37.487 -3.338 -0.976 -0.700 C6 A1JTG 28 A1JTG F01 F1 F 0 1 N N N N N N -24.634 -17.866 41.173 -6.575 -1.364 -2.469 F01 A1JTG 29 A1JTG N1 N1 N 0 1 N N N N N N -25.034 -16.725 36.438 -2.095 -1.745 -0.791 N1 A1JTG 30 A1JTG N2 N2 N 0 1 N N N N N N -25.821 -14.752 35.195 0.106 -2.119 -0.108 N2 A1JTG 31 A1JTG N3 N3 N 0 1 N N N N N N -28.080 -12.334 32.812 4.116 -1.533 1.044 N3 A1JTG 32 A1JTG O1 O1 O 0 1 N N N N N N -26.832 -15.417 37.186 -1.116 -0.471 0.743 O1 A1JTG 33 A1JTG CL1 CL1 CL 0 0 N N N N N N -32.776 -14.347 28.575 8.721 2.343 -1.760 CL1 A1JTG 34 A1JTG H4 H1 H 0 1 N N N N N N -26.883 -18.743 40.251 -6.557 -1.902 0.018 H4 A1JTG 35 A1JTG H3 H2 H 0 1 N N N N N N -25.786 -20.122 40.601 -7.112 -0.222 -0.113 H3 A1JTG 36 A1JTG H6 H3 H 0 1 N N N N N N -24.106 -19.072 36.244 -2.502 0.499 -2.003 H6 A1JTG 37 A1JTG H5 H4 H 0 1 N N N N N N -23.028 -17.899 37.074 -2.441 0.920 -0.285 H5 A1JTG 38 A1JTG H7 H5 H 0 1 N N N N N N -27.368 -20.301 38.598 -5.615 -0.868 1.819 H7 A1JTG 39 A1JTG H01 H6 H 0 1 N N N N N N -25.650 -24.437 37.633 -6.146 3.354 3.363 H01 A1JTG 40 A1JTG H02 H7 H 0 1 N N N N N N -23.421 -24.196 37.242 -5.349 4.848 1.574 H02 A1JTG 41 A1JTG H10 H8 H 0 1 N N N N N N -22.259 -22.109 37.396 -4.501 3.902 -0.531 H10 A1JTG 42 A1JTG H11 H9 H 0 1 N N N N N N -27.102 -22.642 38.210 -6.092 0.917 3.044 H11 A1JTG 43 A1JTG H13 H10 H 0 1 N N N N N N -25.903 -16.693 39.102 -4.541 -2.619 -1.381 H13 A1JTG 44 A1JTG H12 H11 H 0 1 N N N N N N -24.119 -16.511 38.997 -3.968 -1.540 -2.675 H12 A1JTG 45 A1JTG H14 H12 H 0 1 N N N N N N -22.657 -18.405 39.681 -6.348 1.217 -1.835 H14 A1JTG 46 A1JTG H15 H13 H 0 1 N N N N N N -23.415 -19.952 40.189 -5.190 0.671 -3.065 H15 A1JTG 47 A1JTG H16 H14 H 0 1 N N N N N N -22.361 -19.806 37.841 -4.008 2.155 -1.829 H16 A1JTG 48 A1JTG H20 H15 H 0 1 N N N N N N -27.262 -11.045 34.036 3.056 -2.211 2.725 H20 A1JTG 49 A1JTG H21 H16 H 0 1 N N N N N N -26.499 -11.248 32.423 4.018 -3.453 1.888 H21 A1JTG 50 A1JTG H23 H17 H 0 1 N N N N N N -29.751 -13.228 33.409 3.882 0.445 0.376 H23 A1JTG 51 A1JTG H22 H18 H 0 1 N N N N N N -28.950 -12.134 34.587 2.978 0.036 1.853 H22 A1JTG 52 A1JTG H24 H19 H 0 1 N N N N N N -27.862 -14.880 33.651 1.448 0.234 -0.082 H24 A1JTG 53 A1JTG H25 H20 H 0 1 N N N N N N -28.600 -14.533 35.251 2.381 -1.007 -0.953 H25 A1JTG 54 A1JTG H04 H21 H 0 1 N N N N N N -28.160 -10.798 31.555 5.917 -2.145 1.936 H04 A1JTG 55 A1JTG H03 H22 H 0 1 N N N N N N -29.358 -10.815 32.893 5.159 -0.713 2.672 H03 A1JTG 56 A1JTG H08 H23 H 0 1 N N N N N N -28.343 -13.456 30.433 7.205 -1.954 -0.114 H08 A1JTG 57 A1JTG H09 H24 H 0 1 N N N N N N -29.947 -14.635 28.967 8.575 -0.495 -1.547 H09 A1JTG 58 A1JTG H26 H25 H 0 1 N N N N N N -33.119 -12.190 30.473 6.767 2.940 0.226 H26 A1JTG 59 A1JTG H27 H26 H 0 1 N N N N N N -31.512 -11.005 31.934 5.395 1.478 1.655 H27 A1JTG 60 A1JTG H17 H27 H 0 1 N N N N N N -26.814 -12.989 35.835 0.905 -1.393 1.692 H17 A1JTG 61 A1JTG H19 H28 H 0 1 N N N N N N -25.164 -12.245 34.254 2.464 -3.369 -0.036 H19 A1JTG 62 A1JTG H18 H29 H 0 1 N N N N N N -25.695 -13.454 33.036 1.587 -3.753 1.465 H18 A1JTG 63 A1JTG H9 H30 H 0 1 N N N N N N -26.288 -19.251 36.309 -3.175 -0.459 1.368 H9 A1JTG 64 A1JTG H8 H31 H 0 1 N N N N N N -27.248 -18.133 37.336 -3.863 -2.062 1.065 H8 A1JTG 65 A1JTG H1 H32 H 0 1 N N N N N N -24.352 -16.782 35.709 -2.033 -2.496 -1.403 H1 A1JTG 66 A1JTG H2 H33 H 0 1 N N N N N N -25.089 -14.965 34.548 0.168 -2.869 -0.719 H2 A1JTG 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JTG C03 C04 DOUB Y N 1 A1JTG C03 C02 SING Y N 2 A1JTG C02 C01 DOUB Y N 3 A1JTG C05 C06 DOUB Y N 4 A1JTG C05 C04 SING Y N 5 A1JTG CL1 C04 SING N N 6 A1JTG C01 C06 SING Y N 7 A1JTG C01 C27 SING N N 8 A1JTG F01 C5 SING N N 9 A1JTG C1 C3 SING N N 10 A1JTG C1 C5 SING N N 11 A1JTG C2 C6 SING N N 12 A1JTG C2 C15 SING N N 13 A1JTG C3 C4 SING N N 14 A1JTG C3 C11 SING N N 15 A1JTG C4 C6 SING N N 16 A1JTG C5 C13 SING N N 17 A1JTG C5 C14 SING N N 18 A1JTG C6 C13 SING N N 19 A1JTG C6 N1 SING N N 20 A1JTG C7 C8 DOUB Y N 21 A1JTG C7 C12 SING Y N 22 A1JTG C8 C9 SING Y N 23 A1JTG C9 C10 DOUB Y N 24 A1JTG C10 C11 SING Y N 25 A1JTG C10 C15 SING N N 26 A1JTG C11 C12 DOUB Y N 27 A1JTG C14 C15 SING N N 28 A1JTG N1 C16 SING N N 29 A1JTG C16 N2 SING N N 30 A1JTG C16 O1 DOUB N N 31 A1JTG N2 C17 SING N N 32 A1JTG C17 C18 SING N N 33 A1JTG C17 C21 SING N N 34 A1JTG C18 C19 SING N N 35 A1JTG C19 N3 SING N N 36 A1JTG C20 C21 SING N N 37 A1JTG C20 N3 SING N N 38 A1JTG N3 C27 SING N N 39 A1JTG C1 H4 SING N N 40 A1JTG C1 H3 SING N N 41 A1JTG C2 H6 SING N N 42 A1JTG C2 H5 SING N N 43 A1JTG C3 H7 SING N N 44 A1JTG C7 H01 SING N N 45 A1JTG C8 H02 SING N N 46 A1JTG C9 H10 SING N N 47 A1JTG C12 H11 SING N N 48 A1JTG C13 H13 SING N N 49 A1JTG C13 H12 SING N N 50 A1JTG C14 H14 SING N N 51 A1JTG C14 H15 SING N N 52 A1JTG C15 H16 SING N N 53 A1JTG C19 H20 SING N N 54 A1JTG C19 H21 SING N N 55 A1JTG C20 H23 SING N N 56 A1JTG C20 H22 SING N N 57 A1JTG C21 H24 SING N N 58 A1JTG C21 H25 SING N N 59 A1JTG C27 H04 SING N N 60 A1JTG C27 H03 SING N N 61 A1JTG C02 H08 SING N N 62 A1JTG C03 H09 SING N N 63 A1JTG C05 H26 SING N N 64 A1JTG C06 H27 SING N N 65 A1JTG C17 H17 SING N N 66 A1JTG C18 H19 SING N N 67 A1JTG C18 H18 SING N N 68 A1JTG C4 H9 SING N N 69 A1JTG C4 H8 SING N N 70 A1JTG N1 H1 SING N N 71 A1JTG N2 H2 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JTG InChI InChI 1.06 "InChI=1S/C28H33ClFN3O/c29-22-7-5-19(6-8-22)17-33-11-9-23(10-12-33)31-26(34)32-28-15-20-13-27(30,18-28)14-21(16-28)25-4-2-1-3-24(20)25/h1-8,20-21,23H,9-18H2,(H2,31,32,34)/t20-,21+,27+,28-" A1JTG InChIKey InChI 1.06 XLUYXWQIAXYTPQ-RSUUNMLRSA-N A1JTG SMILES_CANONICAL CACTVS 3.385 "FC12C[C@H]3CC(C[C@@H](C1)c4ccccc34)(C2)NC(=O)NC5CCN(CC5)Cc6ccc(Cl)cc6" A1JTG SMILES CACTVS 3.385 "FC12C[CH]3CC(C[CH](C1)c4ccccc34)(C2)NC(=O)NC5CCN(CC5)Cc6ccc(Cl)cc6" A1JTG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)[C@@H]3CC4(C[C@H]2CC(C3)(C4)F)NC(=O)NC5CCN(CC5)Cc6ccc(cc6)Cl" A1JTG SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)C3CC4(CC2CC(C3)(C4)F)NC(=O)NC5CCN(CC5)Cc6ccc(cc6)Cl" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JTG "Create component" 2025-10-29 PDBE A1JTG "Modify name" 2025-10-30 PDBE A1JTG "Initial release" 2026-11-11 RCSB #