data_A1JTY # _chem_comp.id A1JTY _chem_comp.name "Bempedoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H36 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2,2,14,14-tetramethyl-8-oxidanyl-pentadecanedioic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-06 _chem_comp.pdbx_modified_date 2025-12-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 344.486 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JTY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9T5S _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JTY C4 C1 C 0 1 N N N N N N -15.849 14.553 22.549 -7.422 -0.855 -1.628 C4 A1JTY 1 A1JTY C5 C2 C 0 1 N N N N N N -15.107 13.902 24.854 -7.547 -1.414 0.803 C5 A1JTY 2 A1JTY C6 C3 C 0 1 N N N N N N -13.597 13.454 22.882 -6.240 0.575 0.045 C6 A1JTY 3 A1JTY C7 C4 C 0 1 N N N N N N -12.574 12.914 23.885 -4.991 -0.298 -0.091 C7 A1JTY 4 A1JTY C8 C5 C 0 1 N N N N N N -11.947 14.013 24.737 -3.745 0.551 0.168 C8 A1JTY 5 A1JTY C10 C6 C 0 1 N N N N N N -9.812 14.965 25.781 -1.249 0.528 0.292 C10 A1JTY 6 A1JTY C13 C7 C 0 1 N N N N N N -8.653 17.250 25.575 1.249 0.528 0.292 C13 A1JTY 7 A1JTY C15 C8 C 0 1 N N N N N N -8.558 19.056 27.332 3.744 0.551 0.168 C15 A1JTY 8 A1JTY C17 C9 C 0 1 N N N N N N -9.840 18.709 29.490 6.240 0.575 0.045 C17 A1JTY 9 A1JTY C20 C10 C 0 1 N N N N N N -11.262 18.299 31.534 7.422 -0.855 -1.628 C20 A1JTY 10 A1JTY C21 C11 C 0 1 N N N N N N -9.019 19.315 31.782 8.716 0.586 -0.081 C21 A1JTY 11 A1JTY C11 C12 C 0 1 N N N N N N -8.661 15.774 25.200 0.000 -0.345 0.156 C11 A1JTY 12 A1JTY C14 C13 C 0 1 N N N N N N -8.289 17.592 27.018 2.495 -0.322 0.032 C14 A1JTY 13 A1JTY C16 C14 C 0 1 N N N N N N -8.676 19.421 28.808 4.991 -0.298 -0.091 C16 A1JTY 14 A1JTY C18 C15 C 0 1 N N N N N N -10.255 19.254 30.880 7.486 -0.274 -0.215 C18 A1JTY 15 A1JTY C19 C16 C 0 1 N N N N N N -10.864 20.657 30.750 7.547 -1.414 0.803 C19 A1JTY 16 A1JTY C2 C17 C 0 1 N N N N N N -15.813 12.166 23.189 -8.716 0.586 -0.081 C2 A1JTY 17 A1JTY C3 C18 C 0 1 N N N N N N -15.070 13.513 23.370 -7.486 -0.274 -0.215 C3 A1JTY 18 A1JTY C9 C19 C 0 1 N N N N N N -10.425 13.972 24.799 -2.495 -0.322 0.032 C9 A1JTY 19 A1JTY O1 O1 O 0 1 N N N N N N -16.849 11.992 23.872 -9.933 0.050 -0.267 O1 A1JTY 20 A1JTY O12 O2 O 0 1 N N N N N N -7.423 15.162 25.575 -0.000 -1.340 1.182 O12 A1JTY 21 A1JTY O22 O3 O 0 1 N N N N N N -8.469 18.226 32.023 8.608 1.757 0.194 O22 A1JTY 22 A1JTY O23 O4 O 0 1 N N N N N N -8.708 20.425 32.218 9.933 0.050 -0.267 O23 A1JTY 23 A1JTY O24 O5 O 0 1 N N N N N N -15.346 11.389 22.348 -8.608 1.757 0.194 O24 A1JTY 24 A1JTY H4C H1 H 0 1 N N N N N N -16.891 14.591 22.898 -6.531 -1.477 -1.725 H4C A1JTY 25 A1JTY H4B H2 H 0 1 N N N N N N -15.384 15.542 22.675 -8.309 -1.460 -1.813 H4B A1JTY 26 A1JTY H4A H3 H 0 1 N N N N N N -15.829 14.271 21.486 -7.378 -0.043 -2.354 H4A A1JTY 27 A1JTY H5C H4 H 0 1 N N N N N N -14.550 13.158 25.443 -6.657 -2.036 0.706 H5C A1JTY 28 A1JTY H5A H5 H 0 1 N N N N N N -14.647 14.893 24.985 -7.593 -1.000 1.811 H5A A1JTY 29 A1JTY H5B H6 H 0 1 N N N N N N -16.151 13.934 25.199 -8.435 -2.019 0.618 H5B A1JTY 30 A1JTY H6B H7 H 0 1 N N N N N N -13.564 12.811 21.990 -6.286 0.989 1.052 H6B A1JTY 31 A1JTY H6A H8 H 0 1 N N N N N N -13.293 14.475 22.609 -6.196 1.388 -0.680 H6A A1JTY 32 A1JTY H7A H9 H 0 1 N N N N N N -13.078 12.198 24.550 -5.034 -1.110 0.634 H7A A1JTY 33 A1JTY H7B H10 H 0 1 N N N N N N -11.775 12.400 23.330 -4.945 -0.712 -1.098 H7B A1JTY 34 A1JTY H8A H11 H 0 1 N N N N N N -12.248 14.985 24.320 -3.701 1.364 -0.557 H8A A1JTY 35 A1JTY H8B H12 H 0 1 N N N N N N -12.336 13.917 25.762 -3.790 0.966 1.176 H8B A1JTY 36 A1JTY H10A H13 H 0 0 N N N N N N -10.598 15.663 26.104 -1.295 0.942 1.299 H10A A1JTY 37 A1JTY H10B H14 H 0 0 N N N N N N -9.438 14.406 26.651 -1.206 1.340 -0.433 H10B A1JTY 38 A1JTY H13A H15 H 0 0 N N N N N N -7.928 17.756 24.920 1.206 1.340 -0.433 H13A A1JTY 39 A1JTY H13B H16 H 0 0 N N N N N N -9.660 17.648 25.383 1.295 0.942 1.299 H13B A1JTY 40 A1JTY H15B H17 H 0 0 N N N N N N -7.734 19.647 26.906 3.701 1.364 -0.557 H15B A1JTY 41 A1JTY H15A H18 H 0 0 N N N N N N -9.502 19.336 26.841 3.790 0.966 1.176 H15A A1JTY 42 A1JTY H17B H19 H 0 0 N N N N N N -10.714 18.783 28.826 6.196 1.388 -0.680 H17B A1JTY 43 A1JTY H17A H20 H 0 0 N N N N N N -9.561 17.652 29.613 6.286 0.989 1.052 H17A A1JTY 44 A1JTY H20B H21 H 0 0 N N N N N N -11.553 18.691 32.520 7.378 -0.043 -2.354 H20B A1JTY 45 A1JTY H20C H22 H 0 0 N N N N N N -12.154 18.214 30.896 8.309 -1.460 -1.813 H20C A1JTY 46 A1JTY H20A H23 H 0 0 N N N N N N -10.801 17.307 31.655 6.531 -1.477 -1.725 H20A A1JTY 47 A1JTY H11 H24 H 0 1 N N N N N N -8.751 15.721 24.105 0.000 -0.830 -0.820 H11 A1JTY 48 A1JTY H14B H25 H 0 0 N N N N N N -8.888 16.966 27.695 2.539 -1.134 0.758 H14B A1JTY 49 A1JTY H14A H26 H 0 0 N N N N N N -7.220 17.384 27.175 2.449 -0.736 -0.975 H14A A1JTY 50 A1JTY H16B H27 H 0 0 N N N N N N -7.742 19.140 29.317 5.034 -1.110 0.634 H16B A1JTY 51 A1JTY H16A H28 H 0 0 N N N N N N -8.827 20.507 28.893 4.945 -0.712 -1.098 H16A A1JTY 52 A1JTY H19A H29 H 0 0 N N N N N N -11.152 21.026 31.745 6.657 -2.036 0.706 H19A A1JTY 53 A1JTY H19C H30 H 0 0 N N N N N N -10.123 21.338 30.306 8.435 -2.019 0.618 H19C A1JTY 54 A1JTY H19B H31 H 0 0 N N N N N N -11.754 20.612 30.105 7.593 -1.000 1.811 H19B A1JTY 55 A1JTY H9B H32 H 0 1 N N N N N N -10.119 12.958 25.097 -2.539 -1.134 0.758 H9B A1JTY 56 A1JTY H9A H33 H 0 1 N N N N N N -10.033 14.193 23.795 -2.449 -0.736 -0.975 H9A A1JTY 57 A1JTY H1 H34 H 0 1 N N N N N N -17.239 11.155 23.649 -10.692 0.641 -0.170 H1 A1JTY 58 A1JTY H12 H35 H 0 1 N N N N N N -7.439 14.242 25.337 -0.000 -0.980 2.079 H12 A1JTY 59 A1JTY H2 H36 H 0 1 N N N N N N -7.956 20.341 32.792 10.692 0.641 -0.170 H2 A1JTY 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JTY O24 C2 DOUB N N 1 A1JTY C4 C3 SING N N 2 A1JTY C6 C3 SING N N 3 A1JTY C6 C7 SING N N 4 A1JTY C2 C3 SING N N 5 A1JTY C2 O1 SING N N 6 A1JTY C3 C5 SING N N 7 A1JTY C7 C8 SING N N 8 A1JTY C8 C9 SING N N 9 A1JTY C9 C10 SING N N 10 A1JTY C11 C13 SING N N 11 A1JTY C11 O12 SING N N 12 A1JTY C11 C10 SING N N 13 A1JTY C13 C14 SING N N 14 A1JTY C14 C15 SING N N 15 A1JTY C15 C16 SING N N 16 A1JTY C16 C17 SING N N 17 A1JTY C17 C18 SING N N 18 A1JTY C19 C18 SING N N 19 A1JTY C18 C20 SING N N 20 A1JTY C18 C21 SING N N 21 A1JTY C21 O22 DOUB N N 22 A1JTY C21 O23 SING N N 23 A1JTY C4 H4C SING N N 24 A1JTY C4 H4B SING N N 25 A1JTY C4 H4A SING N N 26 A1JTY C5 H5C SING N N 27 A1JTY C5 H5A SING N N 28 A1JTY C5 H5B SING N N 29 A1JTY C6 H6B SING N N 30 A1JTY C6 H6A SING N N 31 A1JTY C7 H7A SING N N 32 A1JTY C7 H7B SING N N 33 A1JTY C8 H8A SING N N 34 A1JTY C8 H8B SING N N 35 A1JTY C10 H10A SING N N 36 A1JTY C10 H10B SING N N 37 A1JTY C13 H13A SING N N 38 A1JTY C13 H13B SING N N 39 A1JTY C15 H15B SING N N 40 A1JTY C15 H15A SING N N 41 A1JTY C17 H17B SING N N 42 A1JTY C17 H17A SING N N 43 A1JTY C20 H20B SING N N 44 A1JTY C20 H20C SING N N 45 A1JTY C20 H20A SING N N 46 A1JTY C11 H11 SING N N 47 A1JTY C14 H14B SING N N 48 A1JTY C14 H14A SING N N 49 A1JTY C16 H16B SING N N 50 A1JTY C16 H16A SING N N 51 A1JTY C19 H19A SING N N 52 A1JTY C19 H19C SING N N 53 A1JTY C19 H19B SING N N 54 A1JTY C9 H9B SING N N 55 A1JTY C9 H9A SING N N 56 A1JTY O1 H1 SING N N 57 A1JTY O12 H12 SING N N 58 A1JTY O23 H2 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JTY InChI InChI 1.06 "InChI=1S/C19H36O5/c1-18(2,16(21)22)13-9-5-7-11-15(20)12-8-6-10-14-19(3,4)17(23)24/h15,20H,5-14H2,1-4H3,(H,21,22)(H,23,24)" A1JTY InChIKey InChI 1.06 HYHMLYSLQUKXKP-UHFFFAOYSA-N A1JTY SMILES_CANONICAL CACTVS 3.385 "CC(C)(CCCCCC(O)CCCCCC(C)(C)C(O)=O)C(O)=O" A1JTY SMILES CACTVS 3.385 "CC(C)(CCCCCC(O)CCCCCC(C)(C)C(O)=O)C(O)=O" A1JTY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(CCCCCC(CCCCCC(C)(C)C(=O)O)O)C(=O)O" A1JTY SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(CCCCCC(CCCCCC(C)(C)C(=O)O)O)C(=O)O" # _pdbx_chem_comp_identifier.comp_id A1JTY _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2,2,14,14-tetramethyl-8-oxidanyl-pentadecanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JTY "Create component" 2025-11-06 PDBE A1JTY "Initial release" 2025-12-17 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1JTY _pdbx_chem_comp_synonyms.name "2,2,14,14-tetramethyl-8-oxidanyl-pentadecanedioic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #