data_A1JU3 # _chem_comp.id A1JU3 _chem_comp.name "(6~{R})-1-[7-(8-chloranyl-3-oxidanyl-naphthalen-1-yl)-6,8-bis(fluoranyl)-2-[[(2~{R},8~{S})-2-fluoranyl-2,3,4,5,6,7-hexahydro-1~{H}-pyrrolizin-4-ium-8-yl]methoxy]quinazolin-4-yl]-6-methyl-1,4-diazepan-4-ium-6-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H33 Cl F3 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-25 _chem_comp.pdbx_modified_date 2026-04-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 628.084 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JU3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9TC2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JU3 C1 C1 C 0 1 N N N N N N 24.356 -0.432 -21.502 3.439 -6.037 0.964 C1 A1JU3 1 A1JU3 C2 C2 C 0 1 N N R N N N 24.521 1.068 -21.772 2.162 -5.523 0.296 C2 A1JU3 2 A1JU3 C6 C3 C 0 1 N N N N N N 26.576 3.603 -22.506 -0.827 -5.191 -0.329 C6 A1JU3 3 A1JU3 C7 C4 C 0 1 N N N N N N 25.987 3.041 -23.793 0.058 -4.073 -0.916 C7 A1JU3 4 A1JU3 C10 C5 C 0 1 Y N N N N N 23.574 3.710 -23.605 0.830 -2.067 -0.021 C10 A1JU3 5 A1JU3 C12 C6 C 0 1 Y N N N N N 23.038 5.805 -22.817 2.054 -0.113 -0.229 C12 A1JU3 6 A1JU3 C14 C7 C 0 1 N N N N N N 24.834 7.127 -21.938 3.299 1.896 -0.444 C14 A1JU3 7 A1JU3 C15 C8 C 0 1 N N S N N N 25.082 8.613 -21.624 4.750 2.382 -0.444 C15 A1JU3 8 A1JU3 C16 C9 C 0 1 N N N N N N 26.567 8.899 -21.304 5.546 1.732 -1.594 C16 A1JU3 9 A1JU3 C21 C10 C 0 1 N N R N N N 23.658 10.522 -21.100 5.342 3.386 1.679 C21 A1JU3 10 A1JU3 C23 C11 C 0 1 N N N N N N 24.109 9.161 -20.563 5.439 2.050 0.895 C23 A1JU3 11 A1JU3 C25 C12 C 0 1 Y N N N N N 21.339 4.589 -23.755 -0.241 0.087 -0.370 C25 A1JU3 12 A1JU3 C26 C13 C 0 1 Y N N N N N 19.998 4.437 -24.142 -1.399 0.860 -0.528 C26 A1JU3 13 A1JU3 C28 C14 C 0 1 Y N N N N N 19.535 3.269 -24.762 -2.640 0.239 -0.511 C28 A1JU3 14 A1JU3 C31 C15 C 0 1 Y N N N N N 21.748 2.355 -24.640 -1.623 -1.913 -0.158 C31 A1JU3 15 A1JU3 C35 C16 C 0 1 Y N N N N N 16.494 3.683 -26.887 -5.545 2.038 -2.102 C35 A1JU3 16 A1JU3 C37 C17 C 0 1 Y N N N N N 15.440 3.497 -26.020 -6.197 2.578 -1.015 C37 A1JU3 17 A1JU3 C38 C18 C 0 1 Y N N N N N 15.664 3.216 -24.658 -5.696 2.364 0.279 C38 A1JU3 18 A1JU3 C39 C19 C 0 1 Y N N N N N 14.568 3.027 -23.777 -6.342 2.903 1.406 C39 A1JU3 19 A1JU3 C40 C20 C 0 1 Y N N N N N 14.762 2.750 -22.442 -5.832 2.677 2.648 C40 A1JU3 20 A1JU3 C42 C21 C 0 1 Y N N N N N 17.134 2.826 -22.747 -4.025 1.380 1.752 C42 A1JU3 21 A1JU3 O3 O1 O 0 1 N N N N N N 23.497 1.733 -21.003 2.173 -5.904 -1.081 O3 A1JU3 22 A1JU3 C4 C22 C 0 1 N N N N N N 25.867 1.538 -21.216 0.969 -6.154 0.970 C4 A1JU3 23 A1JU3 N5 N1 N 0 1 N N N N N N 26.002 3.024 -21.256 -0.092 -6.348 -0.042 N5 A1JU3 24 A1JU3 N8 N2 N 0 1 N N N N N N 24.565 2.703 -23.806 0.780 -3.434 0.161 N8 A1JU3 25 A1JU3 C9 C23 C 0 1 N N N N N N 24.280 1.329 -23.284 2.134 -3.989 0.388 C9 A1JU3 26 A1JU3 N11 N3 N 0 1 Y N N N N N 23.962 4.864 -23.008 1.991 -1.429 -0.054 N11 A1JU3 27 A1JU3 O13 O2 O 0 1 N N N N N N 23.440 6.945 -22.226 3.272 0.480 -0.254 O13 A1JU3 28 A1JU3 C17 C24 C 0 1 N N N N N N 27.138 9.389 -22.606 6.471 2.879 -2.077 C17 A1JU3 29 A1JU3 C18 C25 C 0 1 N N N N N N 26.085 10.264 -23.121 5.559 4.117 -1.887 C18 A1JU3 30 A1JU3 N19 N4 N 0 1 N N N N N N 24.829 9.484 -22.878 4.814 3.846 -0.638 N19 A1JU3 31 A1JU3 C20 C26 C 0 1 N N N N N N 23.642 10.351 -22.617 5.534 4.439 0.510 C20 A1JU3 32 A1JU3 F22 F1 F 0 1 N N N N N N 24.616 11.491 -20.771 6.370 3.490 2.622 F22 A1JU3 33 A1JU3 N24 N5 N 0 1 Y N N N N N 21.752 5.751 -23.146 0.983 0.638 -0.379 N24 A1JU3 34 A1JU3 F27 F2 F 0 1 N N N N N N 19.206 5.500 -23.860 -1.308 2.198 -0.694 F27 A1JU3 35 A1JU3 C29 C27 C 0 1 Y N N N N N 20.429 2.255 -24.999 -2.740 -1.152 -0.338 C29 A1JU3 36 A1JU3 F30 F3 F 0 1 N N N N N N 19.956 1.148 -25.603 -3.957 -1.738 -0.324 F30 A1JU3 37 A1JU3 C32 C28 C 0 1 Y N N N N N 22.245 3.526 -24.004 -0.358 -1.312 -0.182 C32 A1JU3 38 A1JU3 C33 C29 C 0 1 Y N N N N N 18.078 3.317 -25.094 -3.869 1.048 -0.676 C33 A1JU3 39 A1JU3 C34 C30 C 0 1 Y N N N N N 17.790 3.593 -26.422 -4.388 1.278 -1.937 C34 A1JU3 40 A1JU3 O36 O3 O 0 1 N N N N N N 16.257 3.955 -28.207 -6.040 2.245 -3.351 O36 A1JU3 41 A1JU3 C41 C31 C 0 1 Y N N N N N 16.029 2.652 -21.937 -4.676 1.919 2.821 C41 A1JU3 42 A1JU3 CL43 CL1 CL 0 0 N N N N N N 18.677 2.661 -21.973 -2.586 0.439 1.990 CL43 A1JU3 43 A1JU3 C44 C32 C 0 1 Y N N N N N 16.997 3.119 -24.154 -4.522 1.592 0.456 C44 A1JU3 44 A1JU3 H51 H51 H 0 1 N N N N N N 24.524 -0.633 -20.434 3.490 -7.121 0.864 H51 A1JU3 45 A1JU3 H49 H2 H 0 1 N N N N N N 23.338 -0.744 -21.778 4.307 -5.586 0.484 H49 A1JU3 46 A1JU3 H50 H3 H 0 1 N N N N N N 25.088 -0.995 -22.100 3.429 -5.770 2.021 H50 A1JU3 47 A1JU3 H56 H4 H 0 1 N N N N N N 27.658 3.407 -22.510 -1.291 -4.830 0.589 H56 A1JU3 48 A1JU3 H55 H5 H 0 1 N N N N N N 26.400 4.689 -22.494 -1.609 -5.437 -1.047 H55 A1JU3 49 A1JU3 H58 H6 H 0 1 N N N N N N 26.544 2.123 -24.034 0.766 -4.503 -1.625 H58 A1JU3 50 A1JU3 H57 H7 H 0 1 N N N N N N 26.153 3.789 -24.583 -0.568 -3.340 -1.424 H57 A1JU3 51 A1JU3 H61 H8 H 0 1 N N N N N N 25.116 6.513 -21.070 2.754 2.382 0.365 H61 A1JU3 52 A1JU3 H62 H9 H 0 1 N N N N N N 25.434 6.827 -22.810 2.833 2.144 -1.397 H62 A1JU3 53 A1JU3 H63 H10 H 0 1 N N N N N N 27.078 7.983 -20.974 6.135 0.891 -1.227 H63 A1JU3 54 A1JU3 H64 H11 H 0 1 N N N N N N 26.656 9.670 -20.524 4.876 1.412 -2.392 H64 A1JU3 55 A1JU3 H48 H12 H 0 1 N N N N N N 22.655 10.774 -20.726 4.367 3.490 2.154 H48 A1JU3 56 A1JU3 H71 H13 H 0 1 N N N N N N 23.247 8.488 -20.445 4.905 1.257 1.418 H71 A1JU3 57 A1JU3 H72 H14 H 0 1 N N N N N N 24.619 9.277 -19.595 6.481 1.773 0.734 H72 A1JU3 58 A1JU3 H73 H15 H 0 1 N N N N N N 22.419 1.533 -24.843 -1.713 -2.979 -0.014 H73 A1JU3 59 A1JU3 H76 H16 H 0 1 N N N N N N 14.428 3.568 -26.390 -7.092 3.165 -1.159 H76 A1JU3 60 A1JU3 H77 H17 H 0 1 N N N N N N 13.561 3.102 -24.161 -7.239 3.493 1.287 H77 A1JU3 61 A1JU3 H78 H18 H 0 1 N N N N N N 13.911 2.610 -21.792 -6.331 3.092 3.511 H78 A1JU3 62 A1JU3 H52 H19 H 0 1 N N N N N N 23.642 1.575 -20.078 2.211 -6.860 -1.224 H52 A1JU3 63 A1JU3 H54 H20 H 0 1 N N N N N N 25.957 1.201 -20.173 1.254 -7.117 1.392 H54 A1JU3 64 A1JU3 H53 H21 H 0 1 N N N N N N 26.674 1.092 -21.816 0.608 -5.499 1.763 H53 A1JU3 65 A1JU3 H60 H24 H 0 1 N N N N N N 23.222 1.112 -23.490 2.477 -3.688 1.378 H60 A1JU3 66 A1JU3 H59 H25 H 0 1 N N N N N N 24.914 0.626 -23.844 2.813 -3.578 -0.359 H59 A1JU3 67 A1JU3 H66 H26 H 0 1 N N N N N N 27.328 8.552 -23.294 7.362 2.951 -1.453 H66 A1JU3 68 A1JU3 H65 H27 H 0 1 N N N N N N 28.071 9.948 -22.443 6.740 2.749 -3.125 H65 A1JU3 69 A1JU3 H68 H28 H 0 1 N N N N N N 26.225 10.458 -24.195 6.161 5.020 -1.782 H68 A1JU3 70 A1JU3 H67 H29 H 0 1 N N N N N N 26.066 11.219 -22.575 4.871 4.214 -2.726 H67 A1JU3 71 A1JU3 H69 H31 H 0 1 N N N N N N 23.744 11.322 -23.124 5.087 5.394 0.785 H69 A1JU3 72 A1JU3 H70 H32 H 0 1 N N N N N N 22.715 9.860 -22.948 6.589 4.568 0.271 H70 A1JU3 73 A1JU3 H74 H33 H 0 1 N N N N N N 18.606 3.742 -27.114 -3.892 0.864 -2.803 H74 A1JU3 74 A1JU3 H75 H34 H 0 1 N N N N N N 15.320 3.983 -28.362 -6.674 1.574 -3.639 H75 A1JU3 75 A1JU3 H79 H35 H 0 1 N N N N N N 16.168 2.435 -20.888 -4.291 1.755 3.817 H79 A1JU3 76 A1JU3 H45 H1 H 0 1 N N N N N N 26.591 3.297 -20.495 -0.702 -7.109 0.216 H1 A1JU3 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JU3 O36 C35 SING N N 1 A1JU3 C35 C34 DOUB Y N 2 A1JU3 C35 C37 SING Y N 3 A1JU3 C34 C33 SING Y N 4 A1JU3 C37 C38 DOUB Y N 5 A1JU3 F30 C29 SING N N 6 A1JU3 C33 C28 SING N N 7 A1JU3 C33 C44 DOUB Y N 8 A1JU3 C29 C28 DOUB Y N 9 A1JU3 C29 C31 SING Y N 10 A1JU3 C28 C26 SING Y N 11 A1JU3 C38 C44 SING Y N 12 A1JU3 C38 C39 SING Y N 13 A1JU3 C31 C32 DOUB Y N 14 A1JU3 C44 C42 SING Y N 15 A1JU3 C26 F27 SING N N 16 A1JU3 C26 C25 DOUB Y N 17 A1JU3 C32 C25 SING Y N 18 A1JU3 C32 C10 SING Y N 19 A1JU3 N8 C7 SING N N 20 A1JU3 N8 C10 SING N N 21 A1JU3 N8 C9 SING N N 22 A1JU3 C7 C6 SING N N 23 A1JU3 C39 C40 DOUB Y N 24 A1JU3 C25 N24 SING Y N 25 A1JU3 C10 N11 DOUB Y N 26 A1JU3 C9 C2 SING N N 27 A1JU3 N24 C12 DOUB Y N 28 A1JU3 C18 N19 SING N N 29 A1JU3 C18 C17 SING N N 30 A1JU3 N11 C12 SING Y N 31 A1JU3 N19 C20 SING N N 32 A1JU3 N19 C15 SING N N 33 A1JU3 C12 O13 SING N N 34 A1JU3 C42 CL43 SING N N 35 A1JU3 C42 C41 DOUB Y N 36 A1JU3 C20 C21 SING N N 37 A1JU3 C17 C16 SING N N 38 A1JU3 C6 N5 SING N N 39 A1JU3 C40 C41 SING Y N 40 A1JU3 O13 C14 SING N N 41 A1JU3 C14 C15 SING N N 42 A1JU3 C2 C1 SING N N 43 A1JU3 C2 C4 SING N N 44 A1JU3 C2 O3 SING N N 45 A1JU3 C15 C16 SING N N 46 A1JU3 C15 C23 SING N N 47 A1JU3 N5 C4 SING N N 48 A1JU3 C21 F22 SING N N 49 A1JU3 C21 C23 SING N N 50 A1JU3 C1 H51 SING N N 51 A1JU3 C1 H49 SING N N 52 A1JU3 C1 H50 SING N N 53 A1JU3 C6 H56 SING N N 54 A1JU3 C6 H55 SING N N 55 A1JU3 C7 H58 SING N N 56 A1JU3 C7 H57 SING N N 57 A1JU3 C14 H61 SING N N 58 A1JU3 C14 H62 SING N N 59 A1JU3 C16 H63 SING N N 60 A1JU3 C16 H64 SING N N 61 A1JU3 C21 H48 SING N N 62 A1JU3 C23 H71 SING N N 63 A1JU3 C23 H72 SING N N 64 A1JU3 C31 H73 SING N N 65 A1JU3 C37 H76 SING N N 66 A1JU3 C39 H77 SING N N 67 A1JU3 C40 H78 SING N N 68 A1JU3 O3 H52 SING N N 69 A1JU3 C4 H54 SING N N 70 A1JU3 C4 H53 SING N N 71 A1JU3 C9 H60 SING N N 72 A1JU3 C9 H59 SING N N 73 A1JU3 C17 H66 SING N N 74 A1JU3 C17 H65 SING N N 75 A1JU3 C18 H68 SING N N 76 A1JU3 C18 H67 SING N N 77 A1JU3 C20 H69 SING N N 78 A1JU3 C20 H70 SING N N 79 A1JU3 C34 H74 SING N N 80 A1JU3 O36 H75 SING N N 81 A1JU3 C41 H79 SING N N 82 A1JU3 N5 H45 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JU3 InChI InChI 1.06 "InChI=1S/C32H33ClF3N5O3/c1-31(43)15-37-7-9-40(16-31)29-22-12-24(35)26(21-11-20(42)10-18-4-2-5-23(33)25(18)21)27(36)28(22)38-30(39-29)44-17-32-6-3-8-41(32)14-19(34)13-32/h2,4-5,10-12,19,37,42-43H,3,6-9,13-17H2,1H3/t19-,31-,32+/m1/s1" A1JU3 InChIKey InChI 1.06 GAQBENBCMLVYGK-PUPCTGGMSA-N A1JU3 SMILES_CANONICAL CACTVS 3.385 "C[C@@]1(O)CNCCN(C1)c2nc(OC[C@@]34CCCN3C[C@H](F)C4)nc5c(F)c(c(F)cc25)c6cc(O)cc7cccc(Cl)c67" A1JU3 SMILES CACTVS 3.385 "C[C]1(O)CNCCN(C1)c2nc(OC[C]34CCCN3C[CH](F)C4)nc5c(F)c(c(F)cc25)c6cc(O)cc7cccc(Cl)c67" A1JU3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]1(CNCCN(C1)c2c3cc(c(c(c3nc(n2)OC[C@@]45CCCN4C[C@@H](C5)F)F)c6cc(cc7c6c(ccc7)Cl)O)F)O" A1JU3 SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CNCCN(C1)c2c3cc(c(c(c3nc(n2)OCC45CCCN4CC(C5)F)F)c6cc(cc7c6c(ccc7)Cl)O)F)O" # _pdbx_chem_comp_identifier.comp_id A1JU3 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(6~{R})-1-[7-(8-chloranyl-3-oxidanyl-naphthalen-1-yl)-6,8-bis(fluoranyl)-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]quinazolin-4-yl]-6-methyl-1,4-diazepan-6-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JU3 "Create component" 2025-11-25 PDBE A1JU3 "Modify formula" 2025-11-26 PDBE A1JU3 "Modify formal charge" 2025-11-27 PDBE A1JU3 "Initial release" 2026-04-22 RCSB #