data_A1JVZ # _chem_comp.id A1JVZ _chem_comp.name "6,7-dimethoxy-4-[4-[5-(phenylmethyl)pyrimidin-2-yl]piperazin-1-yl]quinazoline" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H26 N6 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-27 _chem_comp.pdbx_modified_date 2026-07-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 442.513 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JVZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9TFJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JVZ C10 C1 C 0 1 Y N N N N N 22.361 26.006 56.213 3.906 0.387 0.094 C10 A1JVZ 1 A1JVZ N12 N1 N 0 1 N N N N N N 19.991 26.822 56.027 1.609 1.179 0.014 N12 A1JVZ 2 A1JVZ C13 C2 C 0 1 N N N N N N 20.066 28.068 56.804 1.054 1.841 -1.174 C13 A1JVZ 3 A1JVZ C20 C3 C 0 1 N N N N N N 13.869 32.457 57.533 -6.594 0.812 -0.603 C20 A1JVZ 4 A1JVZ C21 C4 C 0 1 Y N N N N N 13.039 31.994 58.674 -6.883 -0.577 -0.094 C21 A1JVZ 5 A1JVZ C22 C5 C 0 1 Y N N N N N 11.642 31.960 58.585 -7.201 -0.773 1.236 C22 A1JVZ 6 A1JVZ C24 C6 C 0 1 Y N N N N N 11.477 31.116 60.845 -7.413 -3.125 0.838 C24 A1JVZ 7 A1JVZ C26 C7 C 0 1 Y N N N N N 13.641 31.566 59.880 -6.836 -1.653 -0.960 C26 A1JVZ 8 A1JVZ C01 C8 C 0 1 N N N N N N 27.315 25.890 56.928 8.136 -2.204 0.094 C01 A1JVZ 9 A1JVZ C03 C9 C 0 1 Y N N N N N 25.151 26.296 56.014 5.837 -1.605 0.005 C03 A1JVZ 10 A1JVZ C04 C10 C 0 1 Y N N N N N 24.310 27.349 55.649 4.478 -1.925 -0.120 C04 A1JVZ 11 A1JVZ C06 C11 C 0 1 N N N N N N 23.949 29.366 54.402 2.706 -3.485 -0.409 C06 A1JVZ 12 A1JVZ C07 C12 C 0 1 Y N N N N N 22.938 27.248 55.729 3.524 -0.949 -0.078 C07 A1JVZ 13 A1JVZ C08 C13 C 0 1 Y N N N N N 24.628 25.096 56.466 6.239 -0.299 0.175 C08 A1JVZ 14 A1JVZ C09 C14 C 0 1 Y N N N N N 23.202 24.973 56.564 5.278 0.718 0.222 C09 A1JVZ 15 A1JVZ C11 C15 C 0 1 Y N N N N N 20.910 25.797 56.338 2.959 1.437 0.139 C11 A1JVZ 16 A1JVZ C14 C16 C 0 1 N N N N N N 19.348 29.235 56.146 -0.423 1.467 -1.320 C14 A1JVZ 17 A1JVZ C16 C17 C 0 1 Y N N N N N 16.956 29.766 56.305 -2.504 1.611 -0.233 C16 A1JVZ 18 A1JVZ C18 C18 C 0 1 Y N N N N N 14.709 30.242 56.611 -4.244 0.797 -1.500 C18 A1JVZ 19 A1JVZ C19 C19 C 0 1 Y N N N N N 14.960 31.525 57.105 -5.121 1.100 -0.470 C19 A1JVZ 20 A1JVZ C23 C20 C 0 1 Y N N N N N 10.861 31.528 59.660 -7.465 -2.047 1.703 C23 A1JVZ 21 A1JVZ C25 C21 C 0 1 Y N N N N N 12.869 31.136 60.949 -7.101 -2.927 -0.494 C25 A1JVZ 22 A1JVZ C27 C22 C 0 1 Y N N N N N 16.315 31.844 57.180 -4.614 1.678 0.683 C27 A1JVZ 23 A1JVZ C29 C23 C 0 1 N N N N N N 17.739 27.668 55.175 -0.595 1.208 1.080 C29 A1JVZ 24 A1JVZ C30 C24 C 0 1 N N N N N N 18.601 26.477 55.734 0.882 1.582 1.226 C30 A1JVZ 25 A1JVZ C32 C25 C 0 1 Y N N N N N 21.381 23.607 57.093 4.695 2.938 0.425 C32 A1JVZ 26 A1JVZ N15 N2 N 0 1 N N N N N N 17.961 28.917 55.911 -1.150 1.870 -0.108 N15 A1JVZ 27 A1JVZ N17 N3 N 0 1 Y N N N N N 15.659 29.381 56.209 -2.957 1.062 -1.350 N17 A1JVZ 28 A1JVZ N28 N4 N 0 1 Y N N N N N 17.307 31.007 56.799 -3.315 1.913 0.770 N28 A1JVZ 29 A1JVZ N31 N5 N 0 1 Y N N N N N 20.475 24.613 56.777 3.403 2.676 0.304 N31 A1JVZ 30 A1JVZ N33 N6 N 0 1 Y N N N N N 22.729 23.740 56.996 5.618 2.007 0.385 N33 A1JVZ 31 A1JVZ O02 O1 O 0 1 N N N N N N 26.529 26.472 55.907 6.767 -2.594 -0.040 O02 A1JVZ 32 A1JVZ O05 O2 O 0 1 N N N N N N 24.831 28.561 55.179 4.106 -3.223 -0.287 O05 A1JVZ 33 A1JVZ H131 H1 H 0 0 N N N N N N 19.613 27.891 57.791 1.146 2.922 -1.065 H131 A1JVZ 34 A1JVZ H132 H2 H 0 0 N N N N N N 21.125 28.337 56.930 1.600 1.517 -2.060 H132 A1JVZ 35 A1JVZ H201 H3 H 0 0 N N N N N N 14.333 33.413 57.818 -6.885 0.883 -1.651 H201 A1JVZ 36 A1JVZ H202 H4 H 0 0 N N N N N N 13.203 32.615 56.672 -7.161 1.538 -0.019 H202 A1JVZ 37 A1JVZ H221 H5 H 0 0 N N N N N N 11.160 32.273 57.670 -7.242 0.068 1.912 H221 A1JVZ 38 A1JVZ H241 H6 H 0 0 N N N N N N 10.877 30.783 61.679 -7.620 -4.120 1.202 H241 A1JVZ 39 A1JVZ H261 H7 H 0 0 N N N N N N 14.717 31.574 59.970 -6.592 -1.499 -2.001 H261 A1JVZ 40 A1JVZ H011 H8 H 0 0 N N N N N N 28.378 26.095 56.735 8.772 -3.088 0.040 H011 A1JVZ 41 A1JVZ H012 H9 H 0 0 N N N N N N 27.029 26.319 57.900 8.398 -1.518 -0.711 H012 A1JVZ 42 A1JVZ H013 H10 H 0 0 N N N N N N 27.149 24.803 56.944 8.280 -1.710 1.054 H013 A1JVZ 43 A1JVZ H061 H11 H 0 0 N N N N N N 24.468 30.285 54.092 2.547 -4.556 -0.536 H061 A1JVZ 44 A1JVZ H062 H12 H 0 0 N N N N N N 23.632 28.806 53.510 2.193 -3.146 0.491 H062 A1JVZ 45 A1JVZ H063 H13 H 0 0 N N N N N N 23.066 29.628 55.004 2.311 -2.954 -1.274 H063 A1JVZ 46 A1JVZ H071 H14 H 0 0 N N N N N N 22.306 28.074 55.438 2.480 -1.206 -0.175 H071 A1JVZ 47 A1JVZ H081 H15 H 0 0 N N N N N N 25.276 24.275 56.737 7.288 -0.061 0.271 H081 A1JVZ 48 A1JVZ H141 H16 H 0 0 N N N N N N 19.410 30.114 56.805 -0.845 1.979 -2.185 H141 A1JVZ 49 A1JVZ H142 H17 H 0 0 N N N N N N 19.834 29.462 55.185 -0.513 0.389 -1.457 H142 A1JVZ 50 A1JVZ H181 H18 H 0 0 N N N N N N 13.680 29.920 56.548 -4.608 0.349 -2.413 H181 A1JVZ 51 A1JVZ H231 H19 H 0 0 N N N N N N 9.784 31.512 59.576 -7.713 -2.201 2.743 H231 A1JVZ 52 A1JVZ H251 H20 H 0 0 N N N N N N 13.346 30.816 61.864 -7.060 -3.769 -1.169 H251 A1JVZ 53 A1JVZ H271 H21 H 0 0 N N N N N N 16.589 32.815 57.564 -5.270 1.927 1.504 H271 A1JVZ 54 A1JVZ H291 H22 H 0 0 N N N N N N 16.675 27.399 55.250 -0.687 0.127 0.971 H291 A1JVZ 55 A1JVZ H292 H23 H 0 0 N N N N N N 18.003 27.829 54.119 -1.141 1.532 1.966 H292 A1JVZ 56 A1JVZ H301 H24 H 0 0 N N N N N N 18.597 25.670 54.987 1.304 1.070 2.091 H301 A1JVZ 57 A1JVZ H302 H25 H 0 0 N N N N N N 18.132 26.120 56.663 0.972 2.660 1.363 H302 A1JVZ 58 A1JVZ H321 H26 H 0 0 N N N N N N 20.989 22.661 57.437 5.003 3.964 0.557 H321 A1JVZ 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JVZ C01 O02 SING N N 1 A1JVZ O02 C03 SING N N 2 A1JVZ C03 C04 DOUB Y N 3 A1JVZ C03 C08 SING Y N 4 A1JVZ C04 O05 SING N N 5 A1JVZ C07 C04 SING Y N 6 A1JVZ O05 C06 SING N N 7 A1JVZ C10 C07 DOUB Y N 8 A1JVZ C08 C09 DOUB Y N 9 A1JVZ C09 C10 SING Y N 10 A1JVZ C09 N33 SING Y N 11 A1JVZ C11 C10 SING Y N 12 A1JVZ C11 N12 SING N N 13 A1JVZ N31 C11 DOUB Y N 14 A1JVZ N12 C13 SING N N 15 A1JVZ N12 C30 SING N N 16 A1JVZ C13 C14 SING N N 17 A1JVZ C14 N15 SING N N 18 A1JVZ N15 C16 SING N N 19 A1JVZ N15 C29 SING N N 20 A1JVZ N17 C16 DOUB Y N 21 A1JVZ C16 N28 SING Y N 22 A1JVZ C18 N17 SING Y N 23 A1JVZ C19 C18 DOUB Y N 24 A1JVZ C19 C20 SING N N 25 A1JVZ C27 C19 SING Y N 26 A1JVZ C20 C21 SING N N 27 A1JVZ C21 C22 DOUB Y N 28 A1JVZ C21 C26 SING Y N 29 A1JVZ C22 C23 SING Y N 30 A1JVZ C23 C24 DOUB Y N 31 A1JVZ C24 C25 SING Y N 32 A1JVZ C25 C26 DOUB Y N 33 A1JVZ C27 N28 DOUB Y N 34 A1JVZ C29 C30 SING N N 35 A1JVZ C32 N31 SING Y N 36 A1JVZ N33 C32 DOUB Y N 37 A1JVZ C13 H131 SING N N 38 A1JVZ C13 H132 SING N N 39 A1JVZ C20 H201 SING N N 40 A1JVZ C20 H202 SING N N 41 A1JVZ C22 H221 SING N N 42 A1JVZ C24 H241 SING N N 43 A1JVZ C26 H261 SING N N 44 A1JVZ C01 H011 SING N N 45 A1JVZ C01 H012 SING N N 46 A1JVZ C01 H013 SING N N 47 A1JVZ C06 H061 SING N N 48 A1JVZ C06 H062 SING N N 49 A1JVZ C06 H063 SING N N 50 A1JVZ C07 H071 SING N N 51 A1JVZ C08 H081 SING N N 52 A1JVZ C14 H141 SING N N 53 A1JVZ C14 H142 SING N N 54 A1JVZ C18 H181 SING N N 55 A1JVZ C23 H231 SING N N 56 A1JVZ C25 H251 SING N N 57 A1JVZ C27 H271 SING N N 58 A1JVZ C29 H291 SING N N 59 A1JVZ C29 H292 SING N N 60 A1JVZ C30 H301 SING N N 61 A1JVZ C30 H302 SING N N 62 A1JVZ C32 H321 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JVZ InChI InChI 1.06 "InChI=1S/C25H26N6O2/c1-32-22-13-20-21(14-23(22)33-2)28-17-29-24(20)30-8-10-31(11-9-30)25-26-15-19(16-27-25)12-18-6-4-3-5-7-18/h3-7,13-17H,8-12H2,1-2H3" A1JVZ InChIKey InChI 1.06 VSZPUIIVZZARBI-UHFFFAOYSA-N A1JVZ SMILES_CANONICAL CACTVS 3.385 "COc1cc2ncnc(N3CCN(CC3)c4ncc(Cc5ccccc5)cn4)c2cc1OC" A1JVZ SMILES CACTVS 3.385 "COc1cc2ncnc(N3CCN(CC3)c4ncc(Cc5ccccc5)cn4)c2cc1OC" A1JVZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1OC)ncnc2N3CCN(CC3)c4ncc(cn4)Cc5ccccc5" A1JVZ SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc2c(cc1OC)ncnc2N3CCN(CC3)c4ncc(cn4)Cc5ccccc5" # _pdbx_chem_comp_identifier.comp_id A1JVZ _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6,7-dimethoxy-4-[4-[5-(phenylmethyl)pyrimidin-2-yl]piperazin-1-yl]quinazoline" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JVZ "Create component" 2025-11-27 PDBE A1JVZ "Initial release" 2026-07-15 RCSB #