data_A1JZ1 # _chem_comp.id A1JZ1 _chem_comp.name "(S)-3-HYDROXY-(E)-4-DECENOYL-COA" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H52 N7 O18 P3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (E,3R)-3-oxidanyldec-4-enethioate" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-02-16 _chem_comp.pdbx_modified_date 2026-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 935.767 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JZ1 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 28JJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JZ1 C1 C1 C 0 1 N N N N N N -50.988 -13.565 93.101 11.408 0.904 0.005 C1 A1JZ1 1 A1JZ1 O1 O1 O 0 1 N N N N N N -50.228 -14.439 93.535 11.038 0.863 -1.149 O1 A1JZ1 2 A1JZ1 C2 C2 C 0 1 N N N N N N -51.214 -12.231 93.907 12.680 1.629 0.363 C2 A1JZ1 3 A1JZ1 C3 C3 C 0 1 N N R N N N -49.937 -11.928 94.709 13.304 2.218 -0.903 C3 A1JZ1 4 A1JZ1 O3 O2 O 0 1 N N N N N N -49.180 -10.779 94.182 12.437 3.219 -1.440 O3 A1JZ1 5 A1JZ1 C4 C4 C 0 1 N N N N N N -50.264 -11.671 96.162 14.636 2.837 -0.565 C4 A1JZ1 6 A1JZ1 C5 C5 C 0 1 N N N N N N -50.770 -10.318 96.646 15.728 2.398 -1.141 C5 A1JZ1 7 A1JZ1 C6 C6 C 0 1 N N N N N N -50.935 -10.132 98.157 17.060 3.017 -0.803 C6 A1JZ1 8 A1JZ1 C7 C7 C 0 1 N N N N N N -52.017 -9.115 98.395 18.028 1.924 -0.345 C7 A1JZ1 9 A1JZ1 C8 C8 C 0 1 N N N N N N -51.418 -7.730 98.665 19.380 2.552 -0.002 C8 A1JZ1 10 A1JZ1 C9 C9 C 0 1 N N N N N N -52.221 -7.148 99.822 20.348 1.459 0.456 C9 A1JZ1 11 A1JZ1 C10 C10 C 0 1 N N N N N N -51.706 -5.738 100.058 21.701 2.088 0.799 C10 A1JZ1 12 A1JZ1 N1A N1 N 0 1 Y N N N N N -55.388 -19.647 93.056 -5.345 7.814 0.519 N1A A1JZ1 13 A1JZ1 O1A O3 O 0 1 N N N N N N -55.946 -27.344 85.853 -7.895 -3.699 -0.538 O1A A1JZ1 14 A1JZ1 P1A P1 P 0 1 N N N N N N -54.849 -26.433 86.251 -6.708 -2.673 -0.902 P1A A1JZ1 15 A1JZ1 C1B C11 C 0 1 N N R N N N -56.370 -23.823 90.294 -7.281 2.994 0.475 C1B A1JZ1 16 A1JZ1 S1P S1 S 0 1 N N N N N N -51.907 -13.797 91.496 10.483 0.144 1.229 S1P A1JZ1 17 A1JZ1 C2A C12 C 0 1 Y N N N N N -56.484 -20.515 93.185 -6.032 7.192 1.459 C2A A1JZ1 18 A1JZ1 O2A O4 O 0 1 N N N N N N -54.546 -25.259 85.408 -6.660 -2.475 -2.368 O2A A1JZ1 19 A1JZ1 P2A P2 P 0 1 N N N N N N -52.127 -27.168 85.561 -4.283 -4.376 -0.979 P2A A1JZ1 20 A1JZ1 C2B C13 C 0 1 N N R N N N -57.039 -23.831 88.950 -8.795 3.147 0.207 C2B A1JZ1 21 A1JZ1 O2B O5 O 0 1 N N N N N N -58.144 -22.891 88.936 -9.423 3.856 1.277 O2B A1JZ1 22 A1JZ1 C2P C14 C 0 1 N N N N N N -51.446 -15.540 91.199 9.128 -0.522 0.230 C2P A1JZ1 23 A1JZ1 N3A N2 N 0 1 Y N N N N N -56.548 -21.600 92.320 -6.468 5.958 1.317 N3A A1JZ1 24 A1JZ1 O3A O6 O 0 1 N N N N N N -53.467 -27.327 86.518 -5.304 -3.276 -0.396 O3A A1JZ1 25 A1JZ1 C3B C15 C 0 1 N N S N N N -57.495 -25.296 88.872 -9.312 1.693 0.140 C3B A1JZ1 26 A1JZ1 O3B O7 O 0 1 N N N N N N -58.758 -25.480 89.551 -10.277 1.457 1.167 O3B A1JZ1 27 A1JZ1 P3B P3 P 0 1 N N N N N N -59.696 -26.759 89.290 -11.784 0.980 0.862 P3B A1JZ1 28 A1JZ1 C3P C16 C 0 1 N N N N N N -51.467 -15.654 89.727 8.144 -1.266 1.136 C3P A1JZ1 29 A1JZ1 C4A C17 C 0 1 Y N N N N N -55.576 -21.770 91.399 -6.227 5.279 0.200 C4A A1JZ1 30 A1JZ1 O4A O8 O 0 1 N N N N N N -51.100 -28.181 85.931 -4.894 -5.848 -0.752 O4A A1JZ1 31 A1JZ1 C4B C18 C 0 1 N N R N N N -56.398 -26.049 89.634 -8.050 0.834 0.374 C4B A1JZ1 32 A1JZ1 O4B O9 O 0 1 N N N N N N -55.605 -25.042 90.296 -6.949 1.680 -0.023 O4B A1JZ1 33 A1JZ1 N4P N3 N 0 1 N N N N N N -51.106 -17.036 89.323 7.048 -1.805 0.328 N4P A1JZ1 34 A1JZ1 C5A C19 C 0 1 Y N N N N N -54.548 -20.928 91.291 -5.499 5.897 -0.831 C5A A1JZ1 35 A1JZ1 O5A O10 O 0 1 N N N N N N -52.515 -26.934 84.148 -4.082 -4.143 -2.427 O5A A1JZ1 36 A1JZ1 C5B C20 C 0 1 N N N N N N -55.434 -26.794 88.710 -8.094 -0.426 -0.494 C5B A1JZ1 37 A1JZ1 O5B O11 O 0 1 N N N N N N -55.211 -25.891 87.678 -6.979 -1.261 -0.178 O5B A1JZ1 38 A1JZ1 C5P C21 C 0 1 N N N N N N -51.786 -17.636 88.331 6.057 -2.503 0.916 C5P A1JZ1 39 A1JZ1 O5P O12 O 0 1 N N N N N N -52.675 -17.090 87.699 6.073 -2.685 2.115 O5P A1JZ1 40 A1JZ1 C6A C22 C 0 1 Y N N N N N -54.455 -19.880 92.112 -5.056 7.216 -0.632 C6A A1JZ1 41 A1JZ1 N6A N4 N 0 1 N N N N N N -53.397 -19.079 91.957 -4.334 7.876 -1.611 N6A A1JZ1 42 A1JZ1 O6A O13 O 0 1 N N N N N N -51.655 -25.703 86.070 -2.871 -4.256 -0.215 O6A A1JZ1 43 A1JZ1 C6P C23 C 0 1 N N N N N N -51.408 -19.033 87.975 4.929 -3.057 0.085 C6P A1JZ1 44 A1JZ1 N7A N5 N 0 1 Y N N N N N -53.767 -21.357 90.300 -5.396 4.999 -1.840 N7A A1JZ1 45 A1JZ1 O7A O14 O 0 1 N N N N N N -59.248 -27.674 90.375 -12.561 2.138 0.058 O7A A1JZ1 46 A1JZ1 C7P C24 C 0 1 N N N N N N -52.442 -19.422 86.951 3.945 -3.801 0.991 C7P A1JZ1 47 A1JZ1 C8A C25 C 0 1 Y N N N N N -54.314 -22.449 89.796 -6.000 3.897 -1.503 C8A A1JZ1 48 A1JZ1 O8A O15 O 0 1 N N N N N N -59.344 -27.221 87.945 -11.756 -0.254 0.046 O8A A1JZ1 49 A1JZ1 N8P N6 N 0 1 N N N N N N -52.314 -20.880 86.807 2.849 -4.340 0.183 N8P A1JZ1 50 A1JZ1 N9A N7 N 0 1 Y N N N N N -55.426 -22.697 90.468 -6.529 4.020 -0.253 N9A A1JZ1 51 A1JZ1 O9A O16 O 0 1 N N N N N N -61.065 -26.234 89.477 -12.546 0.687 2.250 O9A A1JZ1 52 A1JZ1 C9P C26 C 0 1 N N N N N N -51.528 -21.550 85.941 1.858 -5.038 0.771 C9P A1JZ1 53 A1JZ1 O9P O17 O 0 1 N N N N N N -50.840 -21.011 85.070 1.920 -5.300 1.954 O9P A1JZ1 54 A1JZ1 CAP C27 C 0 1 N N R N N N -51.629 -23.111 86.093 0.672 -5.494 -0.040 CAP A1JZ1 55 A1JZ1 OAP O18 O 0 1 N N N N N N -52.685 -23.416 87.027 0.948 -5.313 -1.430 OAP A1JZ1 56 A1JZ1 CBP C28 C 0 1 N N N N N N -50.309 -23.806 86.595 -0.557 -4.669 0.347 CBP A1JZ1 57 A1JZ1 CCP C29 C 0 1 N N N N N N -50.408 -25.347 86.687 -1.723 -5.027 -0.577 CCP A1JZ1 58 A1JZ1 CDP C30 C 0 1 N N N N N N -49.168 -23.440 85.611 -0.942 -4.976 1.796 CDP A1JZ1 59 A1JZ1 CEP C31 C 0 1 N N N N N N -49.996 -23.328 88.025 -0.236 -3.179 0.210 CEP A1JZ1 60 A1JZ1 H1 H1 H 0 1 N N N N N N -51.420 -11.406 93.210 12.455 2.432 1.065 H1 A1JZ1 61 A1JZ1 H2 H2 H 0 1 N N N N N N -52.065 -12.351 94.594 13.380 0.930 0.822 H2 A1JZ1 62 A1JZ1 H3 H3 H 0 1 N N N N N N -49.294 -12.819 94.659 13.448 1.428 -1.640 H3 A1JZ1 63 A1JZ1 H4 H4 H 0 1 N N N N N N -48.405 -10.639 94.714 12.265 3.955 -0.838 H4 A1JZ1 64 A1JZ1 H5 H5 H 0 1 N N N N N N -50.135 -12.469 96.878 14.691 3.643 0.153 H5 A1JZ1 65 A1JZ1 H6 H6 H 0 1 N N N N N N -51.003 -9.523 95.953 15.673 1.592 -1.859 H6 A1JZ1 66 A1JZ1 H7 H7 H 0 1 N N N N N N -51.216 -11.089 98.621 17.464 3.514 -1.685 H7 A1JZ1 67 A1JZ1 H8 H8 H 0 1 N N N N N N -49.989 -9.777 98.593 16.929 3.745 -0.003 H8 A1JZ1 68 A1JZ1 H9 H9 H 0 1 N N N N N N -52.662 -9.061 97.506 17.624 1.427 0.537 H9 A1JZ1 69 A1JZ1 H10 H10 H 0 1 N N N N N N -52.616 -9.424 99.264 18.158 1.195 -1.145 H10 A1JZ1 70 A1JZ1 H11 H11 H 0 1 N N N N N N -50.357 -7.819 98.942 19.784 3.049 -0.884 H11 A1JZ1 71 A1JZ1 H12 H12 H 0 1 N N N N N N -51.512 -7.092 97.774 19.250 3.281 0.798 H12 A1JZ1 72 A1JZ1 H13 H13 H 0 1 N N N N N N -53.290 -7.121 99.564 19.944 0.962 1.338 H13 A1JZ1 73 A1JZ1 H14 H14 H 0 1 N N N N N N -52.077 -7.758 100.726 20.479 0.731 -0.344 H14 A1JZ1 74 A1JZ1 H15 H15 H 0 1 N N N N N N -52.261 -5.279 100.889 21.570 2.816 1.599 H15 A1JZ1 75 A1JZ1 H16 H16 H 0 1 N N N N N N -50.636 -5.776 100.309 22.390 1.309 1.125 H16 A1JZ1 76 A1JZ1 H17 H17 H 0 1 N N N N N N -51.848 -5.139 99.147 22.105 2.585 -0.083 H17 A1JZ1 77 A1JZ1 H18 H18 H 0 1 N N N N N N -56.341 -27.032 85.048 -7.985 -3.876 0.408 H18 A1JZ1 78 A1JZ1 H19 H19 H 0 1 N N N N N N -57.123 -23.824 91.095 -7.074 3.059 1.543 H19 A1JZ1 79 A1JZ1 H20 H20 H 0 1 N N N N N N -57.249 -20.345 93.929 -6.246 7.715 2.380 H20 A1JZ1 80 A1JZ1 H21 H21 H 0 1 N N N N N N -56.314 -23.614 88.152 -8.966 3.658 -0.740 H21 A1JZ1 81 A1JZ1 H22 H22 H 0 1 N N N N N N -57.807 -22.004 88.986 -9.091 4.756 1.401 H22 A1JZ1 82 A1JZ1 H23 H23 H 0 1 N N N N N N -52.176 -16.224 91.657 8.611 0.296 -0.273 H23 A1JZ1 83 A1JZ1 H24 H24 H 0 1 N N N N N N -50.443 -15.755 91.596 9.529 -1.210 -0.514 H24 A1JZ1 84 A1JZ1 H25 H25 H 0 1 N N N N N N -57.539 -25.632 87.825 -9.742 1.485 -0.840 H25 A1JZ1 85 A1JZ1 H26 H26 H 0 1 N N N N N N -50.743 -14.947 89.296 8.661 -2.083 1.639 H26 A1JZ1 86 A1JZ1 H27 H27 H 0 1 N N N N N N -52.476 -15.417 89.357 7.743 -0.577 1.880 H27 A1JZ1 87 A1JZ1 H28 H28 H 0 1 N N N N N N -50.776 -28.606 85.145 -5.052 -6.069 0.176 H28 A1JZ1 88 A1JZ1 H29 H29 H 0 1 N N N N N N -56.848 -26.746 90.356 -7.963 0.567 1.427 H29 A1JZ1 89 A1JZ1 H30 H30 H 0 1 N N N N N N -50.362 -17.517 89.786 7.035 -1.659 -0.631 H30 A1JZ1 90 A1JZ1 H31 H31 H 0 1 N N N N N N -55.890 -27.720 88.330 -9.020 -0.967 -0.301 H31 A1JZ1 91 A1JZ1 H32 H32 H 0 1 N N N N N N -54.496 -27.034 89.232 -8.050 -0.143 -1.546 H32 A1JZ1 92 A1JZ1 H33 H33 H 0 1 N N N N N N -53.438 -18.338 92.627 -4.129 7.428 -2.447 H33 A1JZ1 93 A1JZ1 H34 H34 H 0 1 N N N N N N -52.558 -19.605 92.094 -4.033 8.786 -1.462 H34 A1JZ1 94 A1JZ1 H35 H35 H 0 1 N N N N N N -51.458 -19.691 88.855 4.412 -2.240 -0.418 H35 A1JZ1 95 A1JZ1 H36 H36 H 0 1 N N N N N N -50.396 -19.070 87.546 5.330 -3.746 -0.659 H36 A1JZ1 96 A1JZ1 H37 H37 H 0 1 N N N N N N -58.799 -28.420 89.995 -12.618 2.977 0.535 H37 A1JZ1 97 A1JZ1 H38 H38 H 0 1 N N N N N N -52.243 -18.921 85.992 4.462 -4.619 1.494 H38 A1JZ1 98 A1JZ1 H39 H39 H 0 1 N N N N N N -53.450 -19.156 87.301 3.544 -3.113 1.735 H39 A1JZ1 99 A1JZ1 H40 H40 H 0 1 N N N N N N -53.922 -23.036 88.979 -6.071 3.015 -2.122 H40 A1JZ1 100 A1JZ1 H41 H41 H 0 1 N N N N N N -52.873 -21.437 87.421 2.836 -4.195 -0.776 H41 A1JZ1 101 A1JZ1 H42 H42 H 0 1 N N N N N N -61.536 -26.277 88.653 -13.461 0.395 2.143 H42 A1JZ1 102 A1JZ1 H43 H43 H 0 1 N N N N N N -51.877 -23.531 85.107 0.479 -6.548 0.159 H43 A1JZ1 103 A1JZ1 H44 H44 H 0 1 N N N N N N -52.757 -24.358 87.128 1.129 -4.396 -1.679 H44 A1JZ1 104 A1JZ1 H45 H45 H 0 1 N N N N N N -50.397 -25.668 87.739 -1.952 -6.088 -0.479 H45 A1JZ1 105 A1JZ1 H46 H46 H 0 1 N N N N N N -49.569 -25.816 86.152 -1.449 -4.808 -1.609 H46 A1JZ1 106 A1JZ1 H47 H47 H 0 1 N N N N N N -48.232 -23.915 85.941 -0.143 -4.649 2.461 H47 A1JZ1 107 A1JZ1 H48 H48 H 0 1 N N N N N N -49.425 -23.797 84.603 -1.862 -4.449 2.047 H48 A1JZ1 108 A1JZ1 H49 H49 H 0 1 N N N N N N -49.038 -22.348 85.591 -1.095 -6.049 1.912 H49 A1JZ1 109 A1JZ1 H50 H50 H 0 1 N N N N N N -50.824 -23.604 88.694 0.038 -2.960 -0.822 H50 A1JZ1 110 A1JZ1 H51 H51 H 0 1 N N N N N N -49.068 -23.803 88.376 -1.112 -2.592 0.486 H51 A1JZ1 111 A1JZ1 H52 H52 H 0 1 N N N N N N -49.872 -22.235 88.027 0.594 -2.924 0.868 H52 A1JZ1 112 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JZ1 O5A P2A DOUB N N 1 A1JZ1 O9P C9P DOUB N N 2 A1JZ1 O2A P1A DOUB N N 3 A1JZ1 P2A O4A SING N N 4 A1JZ1 P2A O6A SING N N 5 A1JZ1 P2A O3A SING N N 6 A1JZ1 CDP CBP SING N N 7 A1JZ1 O1A P1A SING N N 8 A1JZ1 C9P CAP SING N N 9 A1JZ1 C9P N8P SING N N 10 A1JZ1 O6A CCP SING N N 11 A1JZ1 CAP CBP SING N N 12 A1JZ1 CAP OAP SING N N 13 A1JZ1 P1A O3A SING N N 14 A1JZ1 P1A O5B SING N N 15 A1JZ1 CBP CCP SING N N 16 A1JZ1 CBP CEP SING N N 17 A1JZ1 N8P C7P SING N N 18 A1JZ1 C7P C6P SING N N 19 A1JZ1 O5B C5B SING N N 20 A1JZ1 O5P C5P DOUB N N 21 A1JZ1 O8A P3B DOUB N N 22 A1JZ1 C6P C5P SING N N 23 A1JZ1 C5P N4P SING N N 24 A1JZ1 C5B C4B SING N N 25 A1JZ1 C3B C2B SING N N 26 A1JZ1 C3B O3B SING N N 27 A1JZ1 C3B C4B SING N N 28 A1JZ1 O2B C2B SING N N 29 A1JZ1 C2B C1B SING N N 30 A1JZ1 P3B O9A SING N N 31 A1JZ1 P3B O3B SING N N 32 A1JZ1 P3B O7A SING N N 33 A1JZ1 N4P C3P SING N N 34 A1JZ1 C4B O4B SING N N 35 A1JZ1 C3P C2P SING N N 36 A1JZ1 C8A N7A DOUB Y N 37 A1JZ1 C8A N9A SING Y N 38 A1JZ1 C1B O4B SING N N 39 A1JZ1 C1B N9A SING N N 40 A1JZ1 N7A C5A SING Y N 41 A1JZ1 N9A C4A SING Y N 42 A1JZ1 C2P S1P SING N N 43 A1JZ1 C5A C4A DOUB Y N 44 A1JZ1 C5A C6A SING Y N 45 A1JZ1 C4A N3A SING Y N 46 A1JZ1 S1P C1 SING N N 47 A1JZ1 N6A C6A SING N N 48 A1JZ1 C6A N1A DOUB Y N 49 A1JZ1 N3A C2A DOUB Y N 50 A1JZ1 N1A C2A SING Y N 51 A1JZ1 C1 O1 DOUB N N 52 A1JZ1 C1 C2 SING N N 53 A1JZ1 C2 C3 SING N N 54 A1JZ1 O3 C3 SING N N 55 A1JZ1 C3 C4 SING N N 56 A1JZ1 C4 C5 DOUB N E 57 A1JZ1 C5 C6 SING N N 58 A1JZ1 C6 C7 SING N N 59 A1JZ1 C7 C8 SING N N 60 A1JZ1 C8 C9 SING N N 61 A1JZ1 C9 C10 SING N N 62 A1JZ1 C2 H1 SING N N 63 A1JZ1 C2 H2 SING N N 64 A1JZ1 C3 H3 SING N N 65 A1JZ1 O3 H4 SING N N 66 A1JZ1 C4 H5 SING N N 67 A1JZ1 C5 H6 SING N N 68 A1JZ1 C6 H7 SING N N 69 A1JZ1 C6 H8 SING N N 70 A1JZ1 C7 H9 SING N N 71 A1JZ1 C7 H10 SING N N 72 A1JZ1 C8 H11 SING N N 73 A1JZ1 C8 H12 SING N N 74 A1JZ1 C9 H13 SING N N 75 A1JZ1 C9 H14 SING N N 76 A1JZ1 C10 H15 SING N N 77 A1JZ1 C10 H16 SING N N 78 A1JZ1 C10 H17 SING N N 79 A1JZ1 O1A H18 SING N N 80 A1JZ1 C1B H19 SING N N 81 A1JZ1 C2A H20 SING N N 82 A1JZ1 C2B H21 SING N N 83 A1JZ1 O2B H22 SING N N 84 A1JZ1 C2P H23 SING N N 85 A1JZ1 C2P H24 SING N N 86 A1JZ1 C3B H25 SING N N 87 A1JZ1 C3P H26 SING N N 88 A1JZ1 C3P H27 SING N N 89 A1JZ1 O4A H28 SING N N 90 A1JZ1 C4B H29 SING N N 91 A1JZ1 N4P H30 SING N N 92 A1JZ1 C5B H31 SING N N 93 A1JZ1 C5B H32 SING N N 94 A1JZ1 N6A H33 SING N N 95 A1JZ1 N6A H34 SING N N 96 A1JZ1 C6P H35 SING N N 97 A1JZ1 C6P H36 SING N N 98 A1JZ1 O7A H37 SING N N 99 A1JZ1 C7P H38 SING N N 100 A1JZ1 C7P H39 SING N N 101 A1JZ1 C8A H40 SING N N 102 A1JZ1 N8P H41 SING N N 103 A1JZ1 O9A H42 SING N N 104 A1JZ1 CAP H43 SING N N 105 A1JZ1 OAP H44 SING N N 106 A1JZ1 CCP H45 SING N N 107 A1JZ1 CCP H46 SING N N 108 A1JZ1 CDP H47 SING N N 109 A1JZ1 CDP H48 SING N N 110 A1JZ1 CDP H49 SING N N 111 A1JZ1 CEP H50 SING N N 112 A1JZ1 CEP H51 SING N N 113 A1JZ1 CEP H52 SING N N 114 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JZ1 InChI InChI 1.06 "InChI=1S/C31H52N7O18P3S/c1-4-5-6-7-8-9-19(39)14-22(41)60-13-12-33-21(40)10-11-34-29(44)26(43)31(2,3)16-53-59(50,51)56-58(48,49)52-15-20-25(55-57(45,46)47)24(42)30(54-20)38-18-37-23-27(32)35-17-36-28(23)38/h8-9,17-20,24-26,30,39,42-43H,4-7,10-16H2,1-3H3,(H,33,40)(H,34,44)(H,48,49)(H,50,51)(H2,32,35,36)(H2,45,46,47)/b9-8+/t19-,20+,24+,25+,26-,30+/m0/s1" A1JZ1 InChIKey InChI 1.06 USRWPIVVEDBCOJ-ORQCTBNJSA-N A1JZ1 SMILES_CANONICAL CACTVS 3.385 "CCCCC/C=C/[C@H](O)CC(=O)SCCNC(=O)CCNC(=O)[C@H](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23" A1JZ1 SMILES CACTVS 3.385 "CCCCCC=C[CH](O)CC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23" A1JZ1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCC/C=C/[C@@H](CC(=O)SCCNC(=O)CCNC(=O)[C@@H](C(C)(C)COP(=O)(O)OP(=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O)O" A1JZ1 SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCC=CC(CC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)O)O" # _pdbx_chem_comp_identifier.comp_id A1JZ1 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (~{E},3~{R})-3-oxidanyldec-4-enethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JZ1 "Create component" 2026-02-16 PDBE A1JZ1 "Modify synonyms" 2026-02-17 PDBE A1JZ1 "Initial release" 2026-07-22 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1JZ1 _pdbx_chem_comp_synonyms.name "S-[2-[3-[[(2R)-4-[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] (E,3R)-3-oxidanyldec-4-enethioate" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #