data_A1JZR # _chem_comp.id A1JZR _chem_comp.name "(3~{S})-3-[(~{Z})-[11-[2,2-bis(fluoranyl)ethyl]-8-chloranyl-3-fluoranyl-5~{H}-benzo[b][1,4]benzodiazepin-6-ylidene]amino]-~{N}-propan-2-yl-pyrrolidine-1-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H25 Cl F3 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-02-12 _chem_comp.pdbx_modified_date 2026-03-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.926 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1JZR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 28OQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1JZR C4 C1 C 0 1 N N N N N N 5.317 -3.949 36.906 2.407 -1.220 -2.412 C4 A1JZR 1 A1JZR C6 C2 C 0 1 Y N N N N N 4.498 -6.263 37.128 3.194 0.033 -0.465 C6 A1JZR 2 A1JZR C7 C3 C 0 1 Y N N N N N 3.449 -7.126 36.797 2.466 0.934 0.322 C7 A1JZR 3 A1JZR C8 C4 C 0 1 Y N N N N N 3.239 -8.267 37.569 3.054 2.121 0.747 C8 A1JZR 4 A1JZR C13 C5 C 0 1 N N N N N N 2.582 -6.828 35.632 1.093 0.566 0.728 C13 A1JZR 5 A1JZR C15 C6 C 0 1 N N S N N N 0.300 -6.506 34.771 -1.275 0.941 0.809 C15 A1JZR 6 A1JZR C17 C7 C 0 1 N N N N N N -1.519 -5.503 35.972 -3.425 1.845 1.458 C17 A1JZR 7 A1JZR C21 C8 C 0 1 N N N N N N -1.810 -1.407 37.025 -7.176 0.633 -0.365 C21 A1JZR 8 A1JZR C22 C9 C 0 1 N N N N N N -2.409 -1.378 38.412 -7.476 -0.822 0.000 C22 A1JZR 9 A1JZR C28 C10 C 0 1 Y N N N N N 5.155 -5.480 34.970 2.005 -2.092 -0.153 C28 A1JZR 10 A1JZR C11 C11 C 0 1 Y N N N N N 5.101 -7.673 38.975 5.099 1.476 -0.335 C11 A1JZR 11 A1JZR C12 C12 C 0 1 Y N N N N N 5.318 -6.538 38.215 4.517 0.302 -0.776 C12 A1JZR 12 A1JZR C16 C13 C 0 1 N N N N N N -1.135 -6.762 35.206 -1.913 2.040 1.699 C16 A1JZR 13 A1JZR C19 C14 C 0 1 N N N N N N -0.738 -3.152 35.677 -4.744 0.776 -0.387 C19 A1JZR 14 A1JZR C2 C15 C 0 1 N N N N N N 5.013 -2.699 36.115 1.105 -0.557 -2.867 C2 A1JZR 15 A1JZR C23 C16 C 0 1 N N N N N N -2.655 -0.643 36.033 -8.300 1.531 0.155 C23 A1JZR 16 A1JZR C25 C17 C 0 1 N N N N N N 0.241 -5.035 34.380 -2.237 0.926 -0.405 C25 A1JZR 17 A1JZR C27 C18 C 0 1 Y N N N N N 4.293 -6.192 34.118 1.241 -1.858 0.977 C27 A1JZR 18 A1JZR C29 C19 C 0 1 Y N N N N N 6.428 -5.135 34.529 2.276 -3.407 -0.537 C29 A1JZR 19 A1JZR C30 C20 C 0 1 Y N N N N N 6.851 -5.487 33.260 1.793 -4.470 0.195 C30 A1JZR 20 A1JZR C31 C21 C 0 1 Y N N N N N 5.992 -6.177 32.458 1.029 -4.237 1.326 C31 A1JZR 21 A1JZR C33 C22 C 0 1 Y N N N N N 4.729 -6.542 32.842 0.755 -2.941 1.713 C33 A1JZR 22 A1JZR C9 C23 C 0 1 Y N N N N N 4.068 -8.519 38.642 4.369 2.385 0.415 C9 A1JZR 23 A1JZR F1 F1 F 0 1 N N N N N N 5.433 -1.618 36.824 0.021 -1.179 -2.239 F1 A1JZR 24 A1JZR F3 F2 F 0 1 N N N N N N 3.668 -2.552 35.983 1.128 0.799 -2.524 F3 A1JZR 25 A1JZR F32 F3 F 0 1 N N N N N N 6.404 -6.515 31.212 0.552 -5.275 2.048 F32 A1JZR 26 A1JZR N14 N1 N 0 1 N N N N N N 1.255 -6.782 35.841 0.080 1.318 0.400 N14 A1JZR 27 A1JZR N18 N2 N 0 1 N N N N N N -0.680 -4.471 35.362 -3.576 1.149 0.172 N18 A1JZR 28 A1JZR N20 N3 N 0 1 N N N N N N -1.655 -2.794 36.581 -5.906 1.038 0.243 N20 A1JZR 29 A1JZR N26 N4 N 0 1 N N N N N N 2.981 -6.587 34.438 0.903 -0.584 1.458 N26 A1JZR 30 A1JZR N5 N5 N 0 1 N N N N N N 4.737 -5.137 36.290 2.542 -1.086 -0.960 N5 A1JZR 31 A1JZR O24 O1 O 0 1 N N N N N N 0.022 -2.349 35.160 -4.749 0.204 -1.460 O24 A1JZR 32 A1JZR CL10 CL1 CL 0 0 N N N N N N 3.807 -9.954 39.592 5.112 3.864 0.939 CL10 A1JZR 33 A1JZR H1 H1 H 0 1 N N N N N N 6.408 -4.076 36.965 2.389 -2.277 -2.679 H1 A1JZR 34 A1JZR H2 H2 H 0 1 N N N N N N 4.905 -3.837 37.920 3.252 -0.736 -2.902 H2 A1JZR 35 A1JZR H3 H3 H 0 1 N N N N N N 2.435 -8.947 37.329 2.487 2.831 1.330 H3 A1JZR 36 A1JZR H4 H4 H 0 1 N N N N N N 0.531 -7.114 33.884 -1.273 -0.023 1.318 H4 A1JZR 37 A1JZR H5 H5 H 0 1 N N N N N N -2.586 -5.272 35.841 -3.853 1.242 2.259 H5 A1JZR 38 A1JZR H6 H6 H 0 1 N N N N N N -1.296 -5.610 37.044 -3.922 2.815 1.418 H6 A1JZR 39 A1JZR H7 H7 H 0 1 N N N N N N -0.818 -0.935 37.068 -7.107 0.729 -1.449 H7 A1JZR 40 A1JZR H8 H8 H 0 1 N N N N N N -1.765 -1.944 39.102 -6.675 -1.462 -0.370 H8 A1JZR 41 A1JZR H9 H9 H 0 1 N N N N N N -2.488 -0.336 38.756 -7.545 -0.918 1.084 H9 A1JZR 42 A1JZR H10 H10 H 0 1 N N N N N N -3.410 -1.833 38.388 -8.421 -1.123 -0.452 H10 A1JZR 43 A1JZR H11 H11 H 0 1 N N N N N N 5.736 -7.893 39.821 6.131 1.686 -0.576 H11 A1JZR 44 A1JZR H12 H12 H 0 1 N N N N N N 6.125 -5.866 38.467 5.092 -0.403 -1.359 H12 A1JZR 45 A1JZR H13 H13 H 0 1 N N N N N N -1.789 -6.903 34.333 -1.666 1.878 2.748 H13 A1JZR 46 A1JZR H14 H14 H 0 1 N N N N N N -1.194 -7.648 35.855 -1.595 3.031 1.375 H14 A1JZR 47 A1JZR H15 H15 H 0 1 N N N N N N 5.511 -2.758 35.136 1.005 -0.658 -3.948 H15 A1JZR 48 A1JZR H16 H16 H 0 1 N N N N N N -2.768 0.398 36.371 -8.369 1.436 1.239 H16 A1JZR 49 A1JZR H17 H17 H 0 1 N N N N N N -2.166 -0.657 35.048 -8.087 2.568 -0.105 H17 A1JZR 50 A1JZR H18 H18 H 0 1 N N N N N N -3.646 -1.113 35.957 -9.245 1.230 -0.297 H18 A1JZR 51 A1JZR H19 H19 H 0 1 N N N N N N 1.233 -4.566 34.454 -1.985 1.728 -1.099 H19 A1JZR 52 A1JZR H20 H20 H 0 1 N N N N N N -0.147 -4.913 33.358 -2.198 -0.040 -0.909 H20 A1JZR 53 A1JZR H21 H21 H 0 1 N N N N N N 7.091 -4.588 35.182 2.872 -3.593 -1.419 H21 A1JZR 54 A1JZR H22 H22 H 0 1 N N N N N N 7.839 -5.221 32.913 2.009 -5.483 -0.112 H22 A1JZR 55 A1JZR H23 H23 H 0 1 N N N N N N 4.085 -7.089 32.170 0.158 -2.762 2.596 H23 A1JZR 56 A1JZR H24 H24 H 0 1 N N N N N N -2.254 -3.496 36.967 -5.902 1.495 1.098 H24 A1JZR 57 A1JZR H25 H25 H 0 1 N N N N N N 2.323 -6.685 33.692 0.519 -0.511 2.346 H25 A1JZR 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1JZR F32 C31 SING N N 1 A1JZR C31 C33 DOUB Y N 2 A1JZR C31 C30 SING Y N 3 A1JZR C33 C27 SING Y N 4 A1JZR C30 C29 DOUB Y N 5 A1JZR C27 N26 SING N N 6 A1JZR C27 C28 DOUB Y N 7 A1JZR C25 C15 SING N N 8 A1JZR C25 N18 SING N N 9 A1JZR N26 C13 SING N N 10 A1JZR C29 C28 SING Y N 11 A1JZR C15 C16 SING N N 12 A1JZR C15 N14 SING N N 13 A1JZR C28 N5 SING N N 14 A1JZR O24 C19 DOUB N N 15 A1JZR C16 C17 SING N N 16 A1JZR N18 C19 SING N N 17 A1JZR N18 C17 SING N N 18 A1JZR C13 N14 DOUB N N 19 A1JZR C13 C7 SING N N 20 A1JZR C19 N20 SING N N 21 A1JZR F3 C2 SING N N 22 A1JZR C23 C21 SING N N 23 A1JZR C2 F1 SING N N 24 A1JZR C2 C4 SING N N 25 A1JZR N5 C4 SING N N 26 A1JZR N5 C6 SING N N 27 A1JZR N20 C21 SING N N 28 A1JZR C7 C6 DOUB Y N 29 A1JZR C7 C8 SING Y N 30 A1JZR C21 C22 SING N N 31 A1JZR C6 C12 SING Y N 32 A1JZR C8 C9 DOUB Y N 33 A1JZR C12 C11 DOUB Y N 34 A1JZR C9 C11 SING Y N 35 A1JZR C9 CL10 SING N N 36 A1JZR C4 H1 SING N N 37 A1JZR C4 H2 SING N N 38 A1JZR C8 H3 SING N N 39 A1JZR C15 H4 SING N N 40 A1JZR C17 H5 SING N N 41 A1JZR C17 H6 SING N N 42 A1JZR C21 H7 SING N N 43 A1JZR C22 H8 SING N N 44 A1JZR C22 H9 SING N N 45 A1JZR C22 H10 SING N N 46 A1JZR C11 H11 SING N N 47 A1JZR C12 H12 SING N N 48 A1JZR C16 H13 SING N N 49 A1JZR C16 H14 SING N N 50 A1JZR C2 H15 SING N N 51 A1JZR C23 H16 SING N N 52 A1JZR C23 H17 SING N N 53 A1JZR C23 H18 SING N N 54 A1JZR C25 H19 SING N N 55 A1JZR C25 H20 SING N N 56 A1JZR C29 H21 SING N N 57 A1JZR C30 H22 SING N N 58 A1JZR C33 H23 SING N N 59 A1JZR N20 H24 SING N N 60 A1JZR N26 H25 SING N N 61 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1JZR InChI InChI 1.06 "InChI=1S/C23H25ClF3N5O/c1-13(2)28-23(33)31-8-7-16(11-31)29-22-17-9-14(24)3-5-19(17)32(12-21(26)27)20-6-4-15(25)10-18(20)30-22/h3-6,9-10,13,16,21H,7-8,11-12H2,1-2H3,(H,28,33)(H,29,30)/t16-/m0/s1" A1JZR InChIKey InChI 1.06 OINGHOPGNMYCAB-INIZCTEOSA-N A1JZR SMILES_CANONICAL CACTVS 3.385 "CC(C)NC(=O)N1CC[C@@H](C1)N=C2Nc3cc(F)ccc3N(CC(F)F)c4ccc(Cl)cc24" A1JZR SMILES CACTVS 3.385 "CC(C)NC(=O)N1CC[CH](C1)N=C2Nc3cc(F)ccc3N(CC(F)F)c4ccc(Cl)cc24" A1JZR SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)NC(=O)N1CC[C@@H](C1)/N=C\2/c3cc(ccc3N(c4ccc(cc4N2)F)CC(F)F)Cl" A1JZR SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)NC(=O)N1CCC(C1)N=C2c3cc(ccc3N(c4ccc(cc4N2)F)CC(F)F)Cl" # _pdbx_chem_comp_identifier.comp_id A1JZR _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{S})-3-[(~{Z})-[11-[2,2-bis(fluoranyl)ethyl]-8-chloranyl-3-fluoranyl-5~{H}-benzo[b][1,4]benzodiazepin-6-ylidene]amino]-~{N}-propan-2-yl-pyrrolidine-1-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1JZR "Create component" 2026-02-12 PDBE A1JZR "Initial release" 2026-04-01 RCSB #