data_A1KVW # _chem_comp.id A1KVW _chem_comp.name "[(2~{S},6~{R})-6-(6-aminopurin-9-yl)morpholin-2-yl]methyl dihydrogen phosphate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H15 N6 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-11-02 _chem_comp.pdbx_modified_date 2026-11-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 330.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1KVW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 35FP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1KVW C2 C1 C 0 1 Y N N N N N 19.541 5.327 33.405 4.926 0.342 1.553 C2 A1KVW 1 A1KVW C4 C2 C 0 1 Y N N N N N 21.594 5.750 32.735 3.016 0.082 0.301 C4 A1KVW 2 A1KVW C5 C3 C 0 1 Y N N N N N 22.103 5.483 34.033 3.630 -0.972 -0.397 C5 A1KVW 3 A1KVW C6 C4 C 0 1 Y N N N N N 21.177 5.170 34.966 4.941 -1.329 -0.040 C6 A1KVW 4 A1KVW C8 C5 C 0 1 Y N N N N N 23.802 6.040 32.726 1.641 -0.722 -1.224 C8 A1KVW 5 A1KVW C12 C6 C 0 1 N N R N N N 22.661 6.385 30.588 0.748 1.196 0.152 C12 A1KVW 6 A1KVW C13 C7 C 0 1 N N N N N N 23.270 7.756 30.376 1.003 2.517 -0.580 C13 A1KVW 7 A1KVW C15 C8 C 0 1 N N N N N N 23.922 7.097 28.202 -1.380 2.937 -0.610 C15 A1KVW 8 A1KVW C16 C9 C 0 1 N N S N N N 23.384 5.708 28.463 -1.610 1.612 0.122 C16 A1KVW 9 A1KVW P P1 P 0 1 N N N N N N 25.506 4.604 25.542 -4.542 -1.056 0.250 P A1KVW 10 A1KVW O1P O1 O 0 1 N N N N N N 26.230 5.858 25.880 -5.739 -0.198 0.393 O1P A1KVW 11 A1KVW O2P O2 O 0 1 N N N N N N 26.225 3.372 25.800 -4.578 -2.219 1.363 O2P A1KVW 12 A1KVW O3P O3 O 0 1 N N N N N N 24.913 4.622 24.155 -4.528 -1.719 -1.218 O3P A1KVW 13 A1KVW "O5'" O4 O 0 1 N N N N N N 24.061 4.698 26.432 -3.216 -0.164 0.448 "O5'" A1KVW 14 A1KVW "C5'" C10 C 0 1 N N N N N N 24.243 4.662 27.827 -2.946 1.011 -0.319 "C5'" A1KVW 15 A1KVW N9 N1 N 0 1 Y N N N N N 22.684 6.046 32.010 1.763 0.216 -0.242 N9 A1KVW 16 A1KVW N7 N2 N 0 1 Y N N N N N 23.556 5.685 34.003 2.733 -1.426 -1.304 N7 A1KVW 17 A1KVW N6 N3 N 0 1 N N N N N N 21.558 4.890 36.337 5.597 -2.358 -0.692 N6 A1KVW 18 A1KVW N1 N4 N 0 1 Y N N N N N 19.919 5.050 34.679 5.543 -0.645 0.928 N1 A1KVW 19 A1KVW N3 N5 N 0 1 Y N N N N N 20.326 5.637 32.386 3.695 0.704 1.259 N3 A1KVW 20 A1KVW O11 O5 O 0 1 N N N N N N 23.426 5.396 29.908 -0.550 0.707 -0.196 O11 A1KVW 21 A1KVW N14 N6 N 0 1 N N N N N N 23.220 8.150 28.939 -0.061 3.472 -0.240 N14 A1KVW 22 A1KVW H2 H1 H 0 1 N N N N N N 18.481 5.290 33.200 5.450 0.868 2.337 H2 A1KVW 23 A1KVW H8 H2 H 0 1 N N N N N N 24.779 6.287 32.337 0.761 -0.871 -1.832 H8 A1KVW 24 A1KVW H12 H3 H 0 1 N N N N N N 21.624 6.389 30.221 0.799 1.361 1.228 H12 A1KVW 25 A1KVW H1 H4 H 0 1 N N N N N N 22.710 8.493 30.970 1.967 2.922 -0.274 H1 A1KVW 26 A1KVW H132 H5 H 0 0 N N N N N N 24.319 7.738 30.707 1.005 2.342 -1.656 H132 A1KVW 27 A1KVW H151 H6 H 0 0 N N N N N N 23.832 7.307 27.126 -1.415 2.769 -1.687 H151 A1KVW 28 A1KVW H5 H7 H 0 1 N N N N N N 24.983 7.118 28.492 -2.155 3.649 -0.327 H5 A1KVW 29 A1KVW H16 H8 H 0 1 N N N N N N 22.354 5.630 28.086 -1.628 1.789 1.197 H16 A1KVW 30 A1KVW "H5'1" H9 H 0 0 N N N N N N 23.959 3.670 28.209 -3.742 1.738 -0.162 "H5'1" A1KVW 31 A1KVW "H5'2" H10 H 0 0 N N N N N N 25.299 4.858 28.065 -2.896 0.751 -1.377 "H5'2" A1KVW 32 A1KVW HN61 H11 H 0 0 N N N N N N 20.747 4.637 36.864 5.152 -2.843 -1.405 HN61 A1KVW 33 A1KVW HN62 H12 H 0 0 N N N N N N 22.214 4.136 36.353 6.503 -2.596 -0.436 HN62 A1KVW 34 A1KVW H3 H13 H 0 1 N N N N N N 22.271 8.216 28.630 -0.031 3.714 0.739 H3 A1KVW 35 A1KVW H4 H14 H 0 1 N N N N N N 27.081 3.574 26.159 -5.351 -2.796 1.303 H4 A1KVW 36 A1KVW H6 H15 H 0 1 N N N N N N 25.113 5.451 23.735 -3.769 -2.295 -1.382 H6 A1KVW 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1KVW P O1P DOUB N N 1 A1KVW P O2P SING N N 2 A1KVW P O3P SING N N 3 A1KVW P "O5'" SING N N 4 A1KVW "O5'" "C5'" SING N N 5 A1KVW "C5'" C16 SING N N 6 A1KVW N9 C8 SING Y N 7 A1KVW N9 C4 SING Y N 8 A1KVW N9 C12 SING N N 9 A1KVW C8 N7 DOUB Y N 10 A1KVW N7 C5 SING Y N 11 A1KVW C5 C6 DOUB Y N 12 A1KVW C5 C4 SING Y N 13 A1KVW C6 N6 SING N N 14 A1KVW C6 N1 SING Y N 15 A1KVW N1 C2 DOUB Y N 16 A1KVW C2 N3 SING Y N 17 A1KVW N3 C4 DOUB Y N 18 A1KVW O11 C12 SING N N 19 A1KVW O11 C16 SING N N 20 A1KVW C12 C13 SING N N 21 A1KVW C13 N14 SING N N 22 A1KVW N14 C15 SING N N 23 A1KVW C15 C16 SING N N 24 A1KVW C2 H2 SING N N 25 A1KVW C8 H8 SING N N 26 A1KVW C12 H12 SING N N 27 A1KVW C13 H1 SING N N 28 A1KVW C13 H132 SING N N 29 A1KVW C15 H151 SING N N 30 A1KVW C15 H5 SING N N 31 A1KVW C16 H16 SING N N 32 A1KVW "C5'" "H5'1" SING N N 33 A1KVW "C5'" "H5'2" SING N N 34 A1KVW N6 HN61 SING N N 35 A1KVW N6 HN62 SING N N 36 A1KVW N14 H3 SING N N 37 A1KVW O2P H4 SING N N 38 A1KVW O3P H6 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1KVW InChI InChI 1.06 "InChI=1S/C10H15N6O5P/c11-9-8-10(14-4-13-9)16(5-15-8)7-2-12-1-6(21-7)3-20-22(17,18)19/h4-7,12H,1-3H2,(H2,11,13,14)(H2,17,18,19)/t6-,7+/m0/s1" A1KVW InChIKey InChI 1.06 BDZXQHHSALYAHV-NKWVEPMBSA-N A1KVW SMILES_CANONICAL CACTVS 3.385 "Nc1ncnc2n(cnc12)[C@H]3CNC[C@@H](CO[P](O)(O)=O)O3" A1KVW SMILES CACTVS 3.385 "Nc1ncnc2n(cnc12)[CH]3CNC[CH](CO[P](O)(O)=O)O3" A1KVW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)[C@H]3CNC[C@H](O3)COP(=O)(O)O)N" A1KVW SMILES "OpenEye OEToolkits" 2.0.7 "c1nc(c2c(n1)n(cn2)C3CNCC(O3)COP(=O)(O)O)N" # _pdbx_chem_comp_identifier.comp_id A1KVW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{S},6~{R})-6-(6-aminopurin-9-yl)morpholin-2-yl]methyl dihydrogen phosphate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1KVW "Create component" 2026-11-02 PDBE A1KVW "Initial release" 2026-11-11 RCSB #