data_A1L0D # _chem_comp.id A1L0D _chem_comp.name "[(2~{R},3~{R})-3-azanyl-4-oxidanyl-butan-2-yl]oxy-[(~{R})-cyclohexyl-[(1-cyclohexyl-1,2,3-triazol-4-yl)carbonylamino]methyl]-$l^{3}-oxidanyl-oxidanyl-boron" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H38 B N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-09 _chem_comp.pdbx_modified_date 2024-07-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.357 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L0D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8YSX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L0D C2 C1 C 0 1 N N N N N N 135.011 158.419 170.449 ? ? ? C2 A1L0D 1 A1L0D C4 C2 C 0 1 N N N N N N 133.118 157.202 173.209 ? ? ? C4 A1L0D 2 A1L0D C5 C3 C 0 1 Y N N N N N 134.757 159.916 168.372 ? ? ? C5 A1L0D 3 A1L0D C6 C4 C 0 1 N N N N N N 133.833 160.651 166.086 ? ? ? C6 A1L0D 4 A1L0D C8 C5 C 0 1 N N N N N N 132.916 162.823 165.220 ? ? ? C8 A1L0D 5 A1L0D N1 N1 N 0 1 N N N N N N 134.330 157.481 171.109 ? ? ? N1 A1L0D 6 A1L0D N3 N2 N 0 1 Y N N N N N 133.244 158.643 167.335 ? ? ? N3 A1L0D 7 A1L0D N N3 N 0 1 N N N N N N 138.371 155.406 175.274 ? ? ? N A1L0D 8 A1L0D CA C6 C 0 1 N N R N N N 137.111 155.174 176.029 ? ? ? CA A1L0D 9 A1L0D CB C7 C 0 1 N N R N N N 135.929 154.941 175.077 ? ? ? CB A1L0D 10 A1L0D OG1 O1 O 0 1 N N N N N N 135.753 156.081 174.231 ? ? ? OG1 A1L0D 11 A1L0D CG2 C8 C 0 1 N N N N N N 134.642 154.637 175.810 ? ? ? CG2 A1L0D 12 A1L0D C C9 C 0 1 N N N N N N 137.291 153.971 176.965 ? ? ? C A1L0D 13 A1L0D OXT O2 O 0 1 N N N N N N 137.817 152.924 176.372 ? ? ? OXT A1L0D 14 A1L0D C1 C10 C 0 1 Y N N N N N 134.487 158.809 169.132 ? ? ? C1 A1L0D 15 A1L0D C3 C11 C 0 1 N N R N N N 134.501 157.256 172.537 ? ? ? C3 A1L0D 16 A1L0D B1 B1 B 0 1 N N N N N N 135.374 155.993 172.926 ? ? ? B1 A1L0D 17 A1L0D O1 O3 O 0 1 N N N N N N 134.658 154.859 172.711 ? ? ? O1 A1L0D 18 A1L0D O2 O4 O 0 1 N N N N N N 136.494 155.964 172.161 ? ? ? O2 A1L0D 19 A1L0D O3 O5 O 0 1 N N N N N N 135.935 159.055 170.959 ? ? ? O3 A1L0D 20 A1L0D N2 N4 N 0 1 Y N N N N N 133.550 158.066 168.464 ? ? ? N2 A1L0D 21 A1L0D N4 N5 N 0 1 Y N N N N N 133.976 159.769 167.266 ? ? ? N4 A1L0D 22 A1L0D C7 C12 C 0 1 N N N N N N 133.060 161.916 166.436 ? ? ? C7 A1L0D 23 A1L0D C9 C13 C 0 1 N N N N N N 134.262 163.151 164.608 ? ? ? C9 A1L0D 24 A1L0D C10 C14 C 0 1 N N N N N N 135.012 161.886 164.248 ? ? ? C10 A1L0D 25 A1L0D C11 C15 C 0 1 N N N N N N 135.182 160.974 165.457 ? ? ? C11 A1L0D 26 A1L0D C12 C16 C 0 1 N N N N N N 132.197 156.258 172.438 ? ? ? C12 A1L0D 27 A1L0D C13 C17 C 0 1 N N N N N N 130.772 156.260 172.985 ? ? ? C13 A1L0D 28 A1L0D C14 C18 C 0 1 N N N N N N 130.188 157.659 173.001 ? ? ? C14 A1L0D 29 A1L0D C15 C19 C 0 1 N N N N N N 131.081 158.609 173.774 ? ? ? C15 A1L0D 30 A1L0D C16 C20 C 0 1 N N N N N N 132.507 158.601 173.228 ? ? ? C16 A1L0D 31 A1L0D H1 H1 H 0 1 N N N N N N 133.231 156.839 174.241 ? ? ? H1 A1L0D 32 A1L0D H2 H2 H 0 1 N N N N N N 135.437 160.724 168.599 ? ? ? H2 A1L0D 33 A1L0D H3 H3 H 0 1 N N N N N N 133.244 160.108 165.332 ? ? ? H3 A1L0D 34 A1L0D H4 H4 H 0 1 N N N N N N 132.426 163.758 165.528 ? ? ? H4 A1L0D 35 A1L0D H5 H5 H 0 1 N N N N N N 132.296 162.315 164.467 ? ? ? H5 A1L0D 36 A1L0D H6 H6 H 0 1 N N N N N N 133.679 156.913 170.605 ? ? ? H6 A1L0D 37 A1L0D H7 H7 H 0 1 N N N N N N 139.123 155.555 175.917 ? ? ? H7 A1L0D 38 A1L0D H8 H8 H 0 1 N N N N N N 138.571 154.608 174.706 ? ? ? H8 A1L0D 39 A1L0D H10 H10 H 0 1 N N N N N N 136.893 156.061 176.642 ? ? ? H10 A1L0D 40 A1L0D H11 H11 H 0 1 N N N N N N 136.174 154.069 174.452 ? ? ? H11 A1L0D 41 A1L0D H12 H12 H 0 1 N N N N N N 134.787 153.760 176.458 ? ? ? H12 A1L0D 42 A1L0D H13 H13 H 0 1 N N N N N N 134.357 155.503 176.425 ? ? ? H13 A1L0D 43 A1L0D H14 H14 H 0 1 N N N N N N 133.846 154.427 175.081 ? ? ? H14 A1L0D 44 A1L0D H15 H15 H 0 1 N N N N N N 137.949 154.270 177.794 ? ? ? H15 A1L0D 45 A1L0D H16 H16 H 0 1 N N N N N N 136.305 153.688 177.363 ? ? ? H16 A1L0D 46 A1L0D H17 H17 H 0 1 N N N N N N 137.904 152.215 176.998 ? ? ? H17 A1L0D 47 A1L0D H18 H18 H 0 1 N N N N N N 135.022 158.131 172.954 ? ? ? H18 A1L0D 48 A1L0D H19 H19 H 0 1 N N N N N N 133.872 154.874 173.245 ? ? ? H19 A1L0D 49 A1L0D H20 H20 H 0 1 N N N N N N 137.018 155.207 172.394 ? ? ? H20 A1L0D 50 A1L0D H21 H21 H 0 1 N N N N N N 133.598 162.459 167.228 ? ? ? H21 A1L0D 51 A1L0D H22 H22 H 0 1 N N N N N N 132.059 161.637 166.797 ? ? ? H22 A1L0D 52 A1L0D H23 H23 H 0 1 N N N N N N 134.856 163.729 165.332 ? ? ? H23 A1L0D 53 A1L0D H24 H24 H 0 1 N N N N N N 134.108 163.750 163.698 ? ? ? H24 A1L0D 54 A1L0D H25 H25 H 0 1 N N N N N N 134.451 161.347 163.470 ? ? ? H25 A1L0D 55 A1L0D H26 H26 H 0 1 N N N N N N 136.006 162.157 163.862 ? ? ? H26 A1L0D 56 A1L0D H27 H27 H 0 1 N N N N N N 135.664 160.038 165.138 ? ? ? H27 A1L0D 57 A1L0D H28 H28 H 0 1 N N N N N N 135.816 161.477 166.202 ? ? ? H28 A1L0D 58 A1L0D H29 H29 H 0 1 N N N N N N 132.600 155.237 172.507 ? ? ? H29 A1L0D 59 A1L0D H30 H30 H 0 1 N N N N N N 132.171 156.572 171.384 ? ? ? H30 A1L0D 60 A1L0D H31 H31 H 0 1 N N N N N N 130.144 155.617 172.350 ? ? ? H31 A1L0D 61 A1L0D H32 H32 H 0 1 N N N N N N 130.782 155.865 174.011 ? ? ? H32 A1L0D 62 A1L0D H33 H33 H 0 1 N N N N N N 130.089 158.020 171.967 ? ? ? H33 A1L0D 63 A1L0D H34 H34 H 0 1 N N N N N N 129.196 157.630 173.476 ? ? ? H34 A1L0D 64 A1L0D H35 H35 H 0 1 N N N N N N 130.673 159.628 173.695 ? ? ? H35 A1L0D 65 A1L0D H36 H36 H 0 1 N N N N N N 131.100 158.302 174.830 ? ? ? H36 A1L0D 66 A1L0D H37 H37 H 0 1 N N N N N N 133.131 159.250 173.861 ? ? ? H37 A1L0D 67 A1L0D H38 H38 H 0 1 N N N N N N 132.494 158.994 172.201 ? ? ? H38 A1L0D 68 A1L0D H9 H9 H 0 1 N N N N N N 136.250 155.910 171.244 ? ? ? H9 A1L0D 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L0D C10 C9 SING N N 1 A1L0D C10 C11 SING N N 2 A1L0D C9 C8 SING N N 3 A1L0D C8 C7 SING N N 4 A1L0D C11 C6 SING N N 5 A1L0D C6 C7 SING N N 6 A1L0D C6 N4 SING N N 7 A1L0D N4 N3 SING Y N 8 A1L0D N4 C5 SING Y N 9 A1L0D N3 N2 DOUB Y N 10 A1L0D C5 C1 DOUB Y N 11 A1L0D N2 C1 SING Y N 12 A1L0D C1 C2 SING N N 13 A1L0D C2 O3 DOUB N N 14 A1L0D C2 N1 SING N N 15 A1L0D N1 C3 SING N N 16 A1L0D O2 B1 SING N N 17 A1L0D C12 C13 SING N N 18 A1L0D C12 C4 SING N N 19 A1L0D C3 B1 SING N N 20 A1L0D C3 C4 SING N N 21 A1L0D O1 B1 SING N N 22 A1L0D B1 OG1 SING N N 23 A1L0D C13 C14 SING N N 24 A1L0D C14 C15 SING N N 25 A1L0D C4 C16 SING N N 26 A1L0D C16 C15 SING N N 27 A1L0D OG1 CB SING N N 28 A1L0D CB CG2 SING N N 29 A1L0D CB CA SING N N 30 A1L0D N CA SING N N 31 A1L0D CA C SING N N 32 A1L0D OXT C SING N N 33 A1L0D C4 H1 SING N N 34 A1L0D C5 H2 SING N N 35 A1L0D C6 H3 SING N N 36 A1L0D C8 H4 SING N N 37 A1L0D C8 H5 SING N N 38 A1L0D N1 H6 SING N N 39 A1L0D N H7 SING N N 40 A1L0D N H8 SING N N 41 A1L0D CA H10 SING N N 42 A1L0D CB H11 SING N N 43 A1L0D CG2 H12 SING N N 44 A1L0D CG2 H13 SING N N 45 A1L0D CG2 H14 SING N N 46 A1L0D C H15 SING N N 47 A1L0D C H16 SING N N 48 A1L0D OXT H17 SING N N 49 A1L0D C3 H18 SING N N 50 A1L0D O1 H19 SING N N 51 A1L0D O2 H20 SING N N 52 A1L0D C7 H21 SING N N 53 A1L0D C7 H22 SING N N 54 A1L0D C9 H23 SING N N 55 A1L0D C9 H24 SING N N 56 A1L0D C10 H25 SING N N 57 A1L0D C10 H26 SING N N 58 A1L0D C11 H27 SING N N 59 A1L0D C11 H28 SING N N 60 A1L0D C12 H29 SING N N 61 A1L0D C12 H30 SING N N 62 A1L0D C13 H31 SING N N 63 A1L0D C13 H32 SING N N 64 A1L0D C14 H33 SING N N 65 A1L0D C14 H34 SING N N 66 A1L0D C15 H35 SING N N 67 A1L0D C15 H36 SING N N 68 A1L0D C16 H37 SING N N 69 A1L0D C16 H38 SING N N 70 A1L0D O2 H9 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L0D InChI InChI 1.06 "InChI=1S/C20H38BN5O5/c1-14(17(22)13-27)31-21(29,30)19(15-8-4-2-5-9-15)23-20(28)18-12-26(25-24-18)16-10-6-3-7-11-16/h12,14-17,19,27,29H,2-11,13,22,30H2,1H3,(H,23,28)/t14-,17-,19+/m1/s1" A1L0D InChIKey InChI 1.06 FHUGSJNRJRMQPB-BJZITVGISA-N A1L0D SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O[B-](O)([OH2+])[C@@H](NC(=O)c1cn(nn1)C2CCCCC2)C3CCCCC3)[C@H](N)CO" A1L0D SMILES CACTVS 3.385 "C[CH](O[B-](O)([OH2+])[CH](NC(=O)c1cn(nn1)C2CCCCC2)C3CCCCC3)[CH](N)CO" A1L0D SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B([C@H](C1CCCCC1)NC(=O)c2cn(nn2)C3CCCCC3)([OH2])(O)O[C@H](C)[C@@H](CO)N" A1L0D SMILES "OpenEye OEToolkits" 2.0.7 "B(C(C1CCCCC1)NC(=O)c2cn(nn2)C3CCCCC3)([OH2])(O)OC(C)C(CO)N" # _pdbx_chem_comp_identifier.comp_id A1L0D _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{R})-3-azanyl-4-oxidanyl-butan-2-yl]oxy-[(~{R})-cyclohexyl-[(1-cyclohexyl-1,2,3-triazol-4-yl)carbonylamino]methyl]-$l^{3}-oxidanyl-oxidanyl-boron" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L0D "Create component" 2024-04-09 PDBJ A1L0D "Initial release" 2024-07-31 RCSB #