data_A1L0F # _chem_comp.id A1L0F _chem_comp.name "Mg-2,4-divinyl-phaeoporphyrin a5-monometyl ester" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C35 H30 Mg N4 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-09 _chem_comp.pdbx_modified_date 2025-12-26 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 610.941 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L0F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 8YHY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L0F C6 C1 C 0 1 Y N N N N N 90.543 94.333 95.449 ? ? ? C6 A1L0F 1 A1L0F C7 C2 C 0 1 Y N N N N N 90.961 94.020 94.139 ? ? ? C7 A1L0F 2 A1L0F C2 C3 C 0 1 N N N N N N 93.249 97.698 89.994 ? ? ? C2 A1L0F 3 A1L0F N4 N1 N 0 1 N N N N N N 92.093 97.746 91.913 ? ? ? N4 A1L0F 4 A1L0F C1 C4 C 0 1 N N N N N N 92.796 96.424 90.200 ? ? ? C1 A1L0F 5 A1L0F C10 C5 C 0 1 Y N N N N N 90.592 95.717 95.552 ? ? ? C10 A1L0F 6 A1L0F C11 C6 C 0 1 N N N N N N 91.904 95.354 92.175 ? ? ? C11 A1L0F 7 A1L0F C12 C7 C 0 1 N N N N N N 90.404 99.830 97.836 ? ? ? C12 A1L0F 8 A1L0F C13 C8 C 0 1 N N N N N N 89.998 98.536 98.056 ? ? ? C13 A1L0F 9 A1L0F C14 C9 C 0 1 N N N N N N 90.342 97.796 96.851 ? ? ? C14 A1L0F 10 A1L0F C16 C10 C 0 1 N N N N N N 90.729 99.941 96.454 ? ? ? C16 A1L0F 11 A1L0F C17 C11 C 0 1 N N N N N N 90.231 96.461 96.759 ? ? ? C17 A1L0F 12 A1L0F C18 C12 C 0 1 N N N N N N 92.785 101.921 92.617 ? ? ? C18 A1L0F 13 A1L0F C19 C13 C 0 1 N N N N N N 92.533 102.309 93.912 ? ? ? C19 A1L0F 14 A1L0F C20 C14 C 0 1 N N N N N N 91.872 101.154 94.498 ? ? ? C20 A1L0F 15 A1L0F C22 C15 C 0 1 N N N N N N 92.534 100.525 92.543 ? ? ? C22 A1L0F 16 A1L0F C23 C16 C 0 1 N N N N N N 92.990 99.957 91.367 ? ? ? C23 A1L0F 17 A1L0F C24 C17 C 0 1 N N N N N N 91.288 101.188 95.756 ? ? ? C24 A1L0F 18 A1L0F C26 C18 C 0 1 N N N N N N 89.336 97.925 99.250 ? ? ? C26 A1L0F 19 A1L0F C27 C19 C 0 1 N N N N N N 89.733 100.909 98.599 ? ? ? C27 A1L0F 20 A1L0F C28 C20 C 0 1 N N N N N N 90.189 101.233 99.813 ? ? ? C28 A1L0F 21 A1L0F C29 C21 C 0 1 N N N N N N 90.123 93.414 96.522 ? ? ? C29 A1L0F 22 A1L0F C3 C22 C 0 1 N N N N N N 92.783 98.585 91.117 ? ? ? C3 A1L0F 23 A1L0F C30 C23 C 0 1 N N N N N N 90.203 92.092 96.438 ? ? ? C30 A1L0F 24 A1L0F C31 C24 C 0 1 N N N N N N 91.025 92.689 93.490 ? ? ? C31 A1L0F 25 A1L0F C32 C25 C 0 1 N N N N N N 93.011 95.205 89.372 ? ? ? C32 A1L0F 26 A1L0F C33 C26 C 0 1 N N N N N N 94.082 98.061 88.812 ? ? ? C33 A1L0F 27 A1L0F C34 C27 C 0 1 N N N N N N 93.631 102.180 91.410 ? ? ? C34 A1L0F 28 A1L0F C35 C28 C 0 1 N N R N N N 93.634 100.988 90.613 ? ? ? C35 A1L0F 29 A1L0F C37 C29 C 0 1 N N N N N N 92.835 103.621 94.542 ? ? ? C37 A1L0F 30 A1L0F C38 C30 C 0 1 N N N N N N 92.860 101.277 89.322 ? ? ? C38 A1L0F 31 A1L0F C41 C31 C 0 1 N N N N N N 93.113 102.306 87.176 ? ? ? C41 A1L0F 32 A1L0F C42 C32 C 0 1 N N N N N N 93.166 98.351 87.641 ? ? ? C42 A1L0F 33 A1L0F C43 C33 C 0 1 N N N N N N 93.921 98.705 86.402 ? ? ? C43 A1L0F 34 A1L0F C5 C34 C 0 1 N N N N N N 92.020 96.465 91.430 ? ? ? C5 A1L0F 35 A1L0F C8 C35 C 0 1 Y N N N N N 91.304 95.207 93.532 ? ? ? C8 A1L0F 36 A1L0F N15 N2 N 0 1 N N N N N N 90.789 98.725 95.878 ? ? ? N15 A1L0F 37 A1L0F N21 N3 N 0 1 N N R N N N 91.914 100.116 93.613 ? ? ? N21 A1L0F 38 A1L0F N9 N4 N 0 1 Y N N N N N 91.006 96.246 94.364 ? ? ? N9 A1L0F 39 A1L0F O36 O1 O 0 1 N N N N N N 94.193 103.254 91.180 ? ? ? O36 A1L0F 40 A1L0F O39 O2 O 0 1 N N N N N N 91.668 101.051 89.228 ? ? ? O39 A1L0F 41 A1L0F O40 O3 O 0 1 N N N N N N 93.631 101.795 88.345 ? ? ? O40 A1L0F 42 A1L0F O44 O4 O 0 1 N N N N N N 93.319 98.635 85.327 ? ? ? O44 A1L0F 43 A1L0F O45 O5 O 0 1 N N N N N N 95.114 99.051 86.505 ? ? ? O45 A1L0F 44 A1L0F MG MG1 MG 0 0 N N N N N N 91.141 98.221 93.806 ? ? ? MG A1L0F 45 A1L0F H1 H1 H 0 1 N N N N N N 92.296 94.449 91.734 ? ? ? H1 A1L0F 46 A1L0F H2 H2 H 0 1 N N N N N N 89.859 95.913 97.612 ? ? ? H2 A1L0F 47 A1L0F H3 H3 H 0 1 N N N N N N 91.224 102.137 96.268 ? ? ? H3 A1L0F 48 A1L0F H4 H4 H 0 1 N N N N N N 89.159 96.855 99.064 ? ? ? H4 A1L0F 49 A1L0F H5 H5 H 0 1 N N N N N N 89.986 98.042 100.129 ? ? ? H5 A1L0F 50 A1L0F H6 H6 H 0 1 N N N N N N 88.376 98.429 99.435 ? ? ? H6 A1L0F 51 A1L0F H7 H7 H 0 1 N N N N N N 88.884 101.428 98.178 ? ? ? H7 A1L0F 52 A1L0F H8 H8 H 0 1 N N N N N N 89.708 102.018 100.379 ? ? ? H8 A1L0F 53 A1L0F H9 H9 H 0 1 N N N N N N 91.038 100.710 100.228 ? ? ? H9 A1L0F 54 A1L0F H10 H10 H 0 1 N N N N N N 89.726 93.842 97.431 ? ? ? H10 A1L0F 55 A1L0F H11 H11 H 0 1 N N N N N N 89.877 91.478 97.264 ? ? ? H11 A1L0F 56 A1L0F H12 H12 H 0 1 N N N N N N 90.595 91.630 95.544 ? ? ? H12 A1L0F 57 A1L0F H13 H13 H 0 1 N N N N N N 90.066 92.475 92.995 ? ? ? H13 A1L0F 58 A1L0F H14 H14 H 0 1 N N N N N N 91.832 92.684 92.743 ? ? ? H14 A1L0F 59 A1L0F H15 H15 H 0 1 N N N N N N 91.225 91.920 94.250 ? ? ? H15 A1L0F 60 A1L0F H16 H16 H 0 1 N N N N N N 92.500 94.350 89.838 ? ? ? H16 A1L0F 61 A1L0F H17 H17 H 0 1 N N N N N N 92.604 95.370 88.364 ? ? ? H17 A1L0F 62 A1L0F H18 H18 H 0 1 N N N N N N 94.088 94.994 89.303 ? ? ? H18 A1L0F 63 A1L0F H19 H19 H 0 1 N N N N N N 94.682 98.954 89.042 ? ? ? H19 A1L0F 64 A1L0F H20 H20 H 0 1 N N N N N N 94.751 97.225 88.560 ? ? ? H20 A1L0F 65 A1L0F H21 H21 H 0 1 N N N N N N 94.664 100.696 90.359 ? ? ? H21 A1L0F 66 A1L0F H22 H22 H 0 1 N N N N N N 92.507 103.608 95.592 ? ? ? H22 A1L0F 67 A1L0F H23 H23 H 0 1 N N N N N N 93.918 103.808 94.499 ? ? ? H23 A1L0F 68 A1L0F H24 H24 H 0 1 N N N N N N 92.304 104.418 94.002 ? ? ? H24 A1L0F 69 A1L0F H25 H25 H 0 1 N N N N N N 93.933 102.668 86.538 ? ? ? H25 A1L0F 70 A1L0F H26 H26 H 0 1 N N N N N N 92.557 101.518 86.646 ? ? ? H26 A1L0F 71 A1L0F H27 H27 H 0 1 N N N N N N 92.435 103.140 87.409 ? ? ? H27 A1L0F 72 A1L0F H28 H28 H 0 1 N N N N N N 92.556 97.458 87.440 ? ? ? H28 A1L0F 73 A1L0F H29 H29 H 0 1 N N N N N N 92.509 99.192 87.907 ? ? ? H29 A1L0F 74 A1L0F H30 H30 H 0 1 N N N N N N 95.464 99.244 85.643 ? ? ? H30 A1L0F 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L0F C6 C7 SING Y N 1 A1L0F C6 C10 DOUB Y N 2 A1L0F C6 C29 SING N N 3 A1L0F C7 C31 SING N N 4 A1L0F C7 C8 DOUB Y N 5 A1L0F C2 C1 DOUB N N 6 A1L0F C2 C3 SING N N 7 A1L0F C2 C33 SING N N 8 A1L0F N4 C3 DOUB N N 9 A1L0F N4 C5 SING N N 10 A1L0F N4 MG SING N N 11 A1L0F C1 C32 SING N N 12 A1L0F C1 C5 SING N N 13 A1L0F C10 C17 SING N N 14 A1L0F C10 N9 SING Y N 15 A1L0F C11 C5 DOUB N N 16 A1L0F C11 C8 SING N N 17 A1L0F C12 C13 DOUB N N 18 A1L0F C12 C16 SING N N 19 A1L0F C12 C27 SING N N 20 A1L0F C13 C14 SING N N 21 A1L0F C13 C26 SING N N 22 A1L0F C14 C17 DOUB N N 23 A1L0F C14 N15 SING N N 24 A1L0F C16 C24 SING N N 25 A1L0F C16 N15 DOUB N N 26 A1L0F C18 C19 DOUB N N 27 A1L0F C18 C22 SING N N 28 A1L0F C18 C34 SING N N 29 A1L0F C19 C20 SING N N 30 A1L0F C19 C37 SING N N 31 A1L0F C20 C24 DOUB N N 32 A1L0F C20 N21 SING N N 33 A1L0F C22 C23 DOUB N N 34 A1L0F C22 N21 SING N N 35 A1L0F C23 C3 SING N N 36 A1L0F C23 C35 SING N N 37 A1L0F C27 C28 DOUB N N 38 A1L0F C29 C30 DOUB N N 39 A1L0F C33 C42 SING N N 40 A1L0F C34 C35 SING N N 41 A1L0F C34 O36 DOUB N N 42 A1L0F C35 C38 SING N N 43 A1L0F C38 O39 DOUB N N 44 A1L0F C38 O40 SING N N 45 A1L0F C41 O40 SING N N 46 A1L0F C42 C43 SING N N 47 A1L0F C43 O44 DOUB N N 48 A1L0F C43 O45 SING N N 49 A1L0F C8 N9 SING Y N 50 A1L0F N15 MG SING N N 51 A1L0F N21 MG SING N N 52 A1L0F N9 MG SING N N 53 A1L0F C11 H1 SING N N 54 A1L0F C17 H2 SING N N 55 A1L0F C24 H3 SING N N 56 A1L0F C26 H4 SING N N 57 A1L0F C26 H5 SING N N 58 A1L0F C26 H6 SING N N 59 A1L0F C27 H7 SING N N 60 A1L0F C28 H8 SING N N 61 A1L0F C28 H9 SING N N 62 A1L0F C29 H10 SING N N 63 A1L0F C30 H11 SING N N 64 A1L0F C30 H12 SING N N 65 A1L0F C31 H13 SING N N 66 A1L0F C31 H14 SING N N 67 A1L0F C31 H15 SING N N 68 A1L0F C32 H16 SING N N 69 A1L0F C32 H17 SING N N 70 A1L0F C32 H18 SING N N 71 A1L0F C33 H19 SING N N 72 A1L0F C33 H20 SING N N 73 A1L0F C35 H21 SING N N 74 A1L0F C37 H22 SING N N 75 A1L0F C37 H23 SING N N 76 A1L0F C37 H24 SING N N 77 A1L0F C41 H25 SING N N 78 A1L0F C41 H26 SING N N 79 A1L0F C41 H27 SING N N 80 A1L0F C42 H28 SING N N 81 A1L0F C42 H29 SING N N 82 A1L0F O45 H30 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L0F InChI InChI 1.06 "InChI=1S/C35H32N4O5.Mg/c1-8-19-15(3)22-12-24-17(5)21(10-11-28(40)41)32(38-24)30-31(35(43)44-7)34(42)29-18(6)25(39-33(29)30)14-27-20(9-2)16(4)23(37-27)13-26(19)36-22;/h8-9,12-14,31H,1-2,10-11H2,3-7H3,(H3,36,37,38,39,40,41,42);/q;+2/p-2/b22-12-,23-13-,24-12-,25-14-,26-13-,27-14-,32-30-;/t31-;/m1./s1" A1L0F InChIKey InChI 1.06 YXBIPIDDNARELO-KKNVGXODSA-L A1L0F SMILES_CANONICAL CACTVS 3.385 "COC(=O)[C@H]1C(=O)C2=C(C)C3=CC4=NC(=Cc5n6[Mg][N@]3C2=C1C7=NC(=Cc6c(C)c5C=C)C(=C7CCC(O)=O)C)C(=C4C=C)C" A1L0F SMILES CACTVS 3.385 "COC(=O)[CH]1C(=O)C2=C(C)C3=CC4=NC(=Cc5n6[Mg][N]3C2=C1C7=NC(=Cc6c(C)c5C=C)C(=C7CCC(O)=O)C)C(=C4C=C)C" A1L0F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C=C)C=C4C(=C(C5=[N]4[Mg]36[N]7=C(C(=C(C7=C2)C)CCC(=O)O)C8=C9N6C(=C5)C(=C9C(=O)[C@@H]8C(=O)OC)C)C=C)C" A1L0F SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c2n3c(c1C=C)C=C4C(=C(C5=[N]4[Mg]36[N]7=C(C(=C(C7=C2)C)CCC(=O)O)C8=C9N6C(=C5)C(=C9C(=O)C8C(=O)OC)C)C=C)C" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L0F "Create component" 2024-04-09 PDBJ A1L0F "Initial release" 2025-12-31 RCSB #