data_A1L0V # _chem_comp.id A1L0V _chem_comp.name "2-[[6-[(4-fluorophenyl)methyl]-2-methyl-5-oxidanyl-pyrimidin-4-yl]carbonylamino]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 F N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-19 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 319.288 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L0V _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Z32 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L0V C1 C1 C 0 1 Y N N N N N -4.549 -0.009 -23.061 -1.089 -1.092 -1.011 C1 A1L0V 1 A1L0V C2 C2 C 0 1 Y N N N N N -3.665 1.322 -21.403 0.304 -2.420 0.247 C2 A1L0V 2 A1L0V C3 C3 C 0 1 Y N N N N N -2.252 -0.090 -22.556 1.147 -0.406 -0.480 C3 A1L0V 3 A1L0V C4 C4 C 0 1 Y N N N N N -3.311 -0.530 -23.305 -0.076 -0.138 -1.110 C4 A1L0V 4 A1L0V C5 C5 C 0 1 N N N N N N -0.848 -0.593 -22.738 2.260 0.568 -0.550 C5 A1L0V 5 A1L0V C6 C6 C 0 1 N N N N N N 0.565 -2.338 -23.636 4.533 1.262 -0.009 C6 A1L0V 6 A1L0V C7 C7 C 0 1 N N N N N N 0.565 -3.605 -24.478 5.719 0.725 0.749 C7 A1L0V 7 A1L0V C9 C8 C 0 1 N N N N N N -5.820 -0.394 -23.778 -2.423 -0.861 -1.673 C9 A1L0V 8 A1L0V C10 C9 C 0 1 Y N N N N N -5.824 -0.209 -25.279 -3.347 -0.160 -0.710 C10 A1L0V 9 A1L0V C11 C10 C 0 1 Y N N N N N -6.062 1.031 -25.849 -3.387 1.221 -0.673 C11 A1L0V 10 A1L0V C12 C11 C 0 1 Y N N N N N -6.071 1.206 -27.226 -4.233 1.865 0.210 C12 A1L0V 11 A1L0V C14 C12 C 0 1 Y N N N N N -5.606 -1.130 -27.505 -5.002 -0.257 1.018 C14 A1L0V 12 A1L0V N1 N1 N 0 1 Y N N N N N -4.725 0.918 -22.104 -0.861 -2.202 -0.333 N1 A1L0V 13 A1L0V N2 N2 N 0 1 Y N N N N N -2.419 0.866 -21.585 1.290 -1.552 0.182 N2 A1L0V 14 A1L0V N3 N3 N 0 1 N N N N N N -0.703 -1.649 -23.538 3.431 0.299 0.060 N3 A1L0V 15 A1L0V O1 O1 O 0 1 N N N N N N 0.080 -0.069 -22.125 2.118 1.611 -1.158 O1 A1L0V 16 A1L0V O2 O2 O 0 1 N N N N N N -3.204 -1.469 -24.285 -0.268 1.016 -1.797 O2 A1L0V 17 A1L0V C8 C13 C 0 1 N N N N N N -3.892 2.354 -20.346 0.511 -3.703 1.009 C8 A1L0V 18 A1L0V O3 O3 O 0 1 N N N N N N 1.692 -4.044 -24.797 5.651 -0.353 1.292 O3 A1L0V 19 A1L0V O4 O4 O 0 1 N N N N N N -0.536 -4.118 -24.787 6.851 1.443 0.822 O4 A1L0V 20 A1L0V C13 C14 C 0 1 Y N N N N N -5.841 0.115 -28.015 -5.042 1.126 1.056 C13 A1L0V 21 A1L0V C15 C15 C 0 1 Y N N N N N -5.602 -1.281 -26.126 -4.158 -0.899 0.131 C15 A1L0V 22 A1L0V F1 F1 F 0 1 N N N N N N -5.846 0.276 -29.365 -5.866 1.754 1.924 F1 A1L0V 23 A1L0V H1 H1 H 0 1 N N N N N N 0.882 -2.609 -22.618 4.217 2.207 0.433 H1 A1L0V 24 A1L0V H2 H2 H 0 1 N N N N N N -6.637 0.215 -23.363 -2.286 -0.243 -2.560 H2 A1L0V 25 A1L0V H3 H3 H 0 1 N N N N N N -6.013 -1.457 -23.571 -2.857 -1.819 -1.960 H3 A1L0V 26 A1L0V H4 H4 H 0 1 N N N N N N -6.245 1.881 -25.208 -2.756 1.798 -1.333 H4 A1L0V 27 A1L0V H5 H5 H 0 1 N N N N N N -6.255 2.177 -27.661 -4.264 2.944 0.240 H5 A1L0V 28 A1L0V H6 H6 H 0 1 N N N N N N -5.428 -1.973 -28.157 -5.635 -0.835 1.675 H6 A1L0V 29 A1L0V H7 H7 H 0 1 N N N N N N -2.300 -1.751 -24.357 -0.618 1.740 -1.260 H7 A1L0V 30 A1L0V H8 H8 H 0 1 N N N N N N -4.958 2.625 -20.320 0.902 -4.466 0.336 H8 A1L0V 31 A1L0V H9 H9 H 0 1 N N N N N N -3.593 1.949 -19.368 1.220 -3.535 1.819 H9 A1L0V 32 A1L0V H10 H10 H 0 1 N N N N N N -3.292 3.248 -20.572 -0.441 -4.038 1.423 H10 A1L0V 33 A1L0V H11 H11 H 0 1 N N N N N N -0.387 -4.900 -25.306 7.584 1.056 1.320 H11 A1L0V 34 A1L0V H12 H12 H 0 1 N N N N N N -5.421 -2.258 -25.703 -4.127 -1.978 0.100 H12 A1L0V 35 A1L0V H13 H13 H 0 1 N N N N N N 1.295 -1.641 -24.074 4.810 1.423 -1.051 H13 A1L0V 36 A1L0V H14 H14 H 0 1 N N N N N N -1.481 -1.969 -24.078 3.545 -0.534 0.545 H14 A1L0V 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L0V F1 C13 SING N N 1 A1L0V C13 C14 DOUB Y N 2 A1L0V C13 C12 SING Y N 3 A1L0V C14 C15 SING Y N 4 A1L0V C12 C11 DOUB Y N 5 A1L0V C15 C10 DOUB Y N 6 A1L0V C11 C10 SING Y N 7 A1L0V C10 C9 SING N N 8 A1L0V O3 C7 DOUB N N 9 A1L0V O4 C7 SING N N 10 A1L0V C7 C6 SING N N 11 A1L0V O2 C4 SING N N 12 A1L0V C9 C1 SING N N 13 A1L0V C6 N3 SING N N 14 A1L0V N3 C5 SING N N 15 A1L0V C4 C1 DOUB Y N 16 A1L0V C4 C3 SING Y N 17 A1L0V C1 N1 SING Y N 18 A1L0V C5 C3 SING N N 19 A1L0V C5 O1 DOUB N N 20 A1L0V C3 N2 DOUB Y N 21 A1L0V N1 C2 DOUB Y N 22 A1L0V N2 C2 SING Y N 23 A1L0V C2 C8 SING N N 24 A1L0V C6 H1 SING N N 25 A1L0V C9 H2 SING N N 26 A1L0V C9 H3 SING N N 27 A1L0V C11 H4 SING N N 28 A1L0V C12 H5 SING N N 29 A1L0V C14 H6 SING N N 30 A1L0V O2 H7 SING N N 31 A1L0V C8 H8 SING N N 32 A1L0V C8 H9 SING N N 33 A1L0V C8 H10 SING N N 34 A1L0V O4 H11 SING N N 35 A1L0V C15 H12 SING N N 36 A1L0V C6 H13 SING N N 37 A1L0V N3 H14 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L0V InChI InChI 1.06 "InChI=1S/C15H14FN3O4/c1-8-18-11(6-9-2-4-10(16)5-3-9)14(22)13(19-8)15(23)17-7-12(20)21/h2-5,22H,6-7H2,1H3,(H,17,23)(H,20,21)" A1L0V InChIKey InChI 1.06 MNJZVYOQKXSJCJ-UHFFFAOYSA-N A1L0V SMILES_CANONICAL CACTVS 3.385 "Cc1nc(Cc2ccc(F)cc2)c(O)c(n1)C(=O)NCC(O)=O" A1L0V SMILES CACTVS 3.385 "Cc1nc(Cc2ccc(F)cc2)c(O)c(n1)C(=O)NCC(O)=O" A1L0V SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1nc(c(c(n1)C(=O)NCC(=O)O)O)Cc2ccc(cc2)F" A1L0V SMILES "OpenEye OEToolkits" 2.0.7 "Cc1nc(c(c(n1)C(=O)NCC(=O)O)O)Cc2ccc(cc2)F" # _pdbx_chem_comp_identifier.comp_id A1L0V _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[6-[(4-fluorophenyl)methyl]-2-methyl-5-oxidanyl-pyrimidin-4-yl]carbonylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L0V "Create component" 2024-04-19 PDBJ A1L0V "Initial release" 2025-02-26 RCSB #