data_A1L0X # _chem_comp.id A1L0X _chem_comp.name "2-[[6-methyl-5-oxidanyl-2-[(4-phenylphenyl)methyl]pyrimidin-4-yl]carbonylamino]ethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H19 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-19 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 377.393 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L0X _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Z35 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L0X C1 C1 C 0 1 Y N N N N N 23.423 -16.250 -3.264 1.864 -3.259 -0.259 C1 A1L0X 1 A1L0X C2 C2 C 0 1 Y N N N N N 23.694 -14.851 -5.072 0.984 -1.686 1.168 C2 A1L0X 2 A1L0X C3 C3 C 0 1 Y N N N N N 25.080 -14.577 -3.258 2.721 -1.020 -0.187 C3 A1L0X 3 A1L0X C7 C4 C 0 1 N N N N N N 27.512 -13.291 -0.674 4.523 2.307 -0.573 C7 A1L0X 4 A1L0X C6 C5 C 0 1 N N N N N N 26.232 -13.821 -2.667 3.656 0.032 -0.650 C6 A1L0X 5 A1L0X O2 O1 O 0 1 N N N N N N 26.851 -13.037 -3.378 4.475 -0.220 -1.512 O2 A1L0X 6 A1L0X C4 C6 C 0 1 Y N N N N N 24.452 -15.613 -2.621 2.769 -2.308 -0.734 C4 A1L0X 7 A1L0X C5 C7 C 0 1 N N N N N N 23.261 -14.445 -6.454 -0.020 -1.342 2.238 C5 A1L0X 8 A1L0X O3 O2 O 0 1 N N N N N N 28.587 -13.014 1.407 4.984 4.682 -0.079 O3 A1L0X 9 A1L0X C11 C8 C 0 1 Y N N N N N 20.908 -14.083 -5.587 -1.435 0.518 1.344 C11 A1L0X 10 A1L0X C13 C9 C 0 1 Y N N N N N 19.217 -12.930 -6.879 -3.610 0.101 0.419 C13 A1L0X 11 A1L0X C15 C10 C 0 1 Y N N N N N 21.457 -13.247 -7.747 -2.292 -1.721 1.258 C15 A1L0X 12 A1L0X N1 N1 N 0 1 Y N N N N N 23.044 -15.871 -4.494 1.000 -2.910 0.676 N1 A1L0X 13 A1L0X C18 C11 C 0 1 Y N N N N N 15.833 -12.049 -8.337 -6.180 2.425 -1.042 C18 A1L0X 14 A1L0X C10 C12 C 0 1 Y N N N N N 21.852 -13.916 -6.596 -1.285 -0.834 1.595 C10 A1L0X 15 A1L0X C12 C13 C 0 1 Y N N N N N 19.616 -13.601 -5.724 -2.593 0.990 0.760 C12 A1L0X 16 A1L0X C14 C14 C 0 1 Y N N N N N 20.167 -12.759 -7.888 -3.452 -1.261 0.669 C14 A1L0X 17 A1L0X C16 C15 C 0 1 Y N N N N N 17.835 -12.397 -7.022 -4.858 0.602 -0.209 C16 A1L0X 18 A1L0X C17 C16 C 0 1 Y N N N N N 17.116 -12.561 -8.206 -5.017 1.964 -0.459 C17 A1L0X 19 A1L0X C19 C17 C 0 1 Y N N N N N 15.247 -11.366 -7.294 -7.186 1.538 -1.379 C19 A1L0X 20 A1L0X O1 O3 O 0 1 N N N N N N 24.775 -16.060 -1.376 3.671 -2.624 -1.697 O1 A1L0X 21 A1L0X N2 N2 N 0 1 Y N N N N N 24.705 -14.182 -4.517 1.818 -0.757 0.757 N2 A1L0X 22 A1L0X C8 C18 C 0 1 N N N N N N 27.664 -13.607 0.808 4.252 3.586 0.177 C8 A1L0X 23 A1L0X C9 C19 C 0 1 N N N N N N 22.684 -17.386 -2.629 1.870 -4.661 -0.810 C9 A1L0X 24 A1L0X O4 O4 O 0 1 N N N N N N 26.877 -14.430 1.325 3.377 3.625 1.009 O4 A1L0X 25 A1L0X N3 N3 N 0 1 N N N N N N 26.506 -14.055 -1.381 3.598 1.268 -0.115 N3 A1L0X 26 A1L0X C20 C20 C 0 1 Y N N N N N 15.941 -11.190 -6.115 -7.034 0.185 -1.133 C20 A1L0X 27 A1L0X C21 C21 C 0 1 Y N N N N N 17.226 -11.698 -5.981 -5.875 -0.287 -0.550 C21 A1L0X 28 A1L0X H1 H1 H 0 1 N N N N N N 28.481 -13.478 -1.160 4.381 2.476 -1.641 H1 A1L0X 29 A1L0X H2 H2 H 0 1 N N N N N N 23.353 -15.327 -7.105 -0.244 -2.233 2.825 H2 A1L0X 30 A1L0X H3 H3 H 0 1 N N N N N N 23.948 -13.660 -6.801 0.392 -0.571 2.889 H3 A1L0X 31 A1L0X H4 H4 H 0 1 N N N N N N 28.599 -13.285 2.318 4.773 5.479 0.427 H4 A1L0X 32 A1L0X H5 H5 H 0 1 N N N N N N 21.188 -14.598 -4.680 -0.646 1.206 1.609 H5 A1L0X 33 A1L0X H6 H6 H 0 1 N N N N N N 22.168 -13.104 -8.547 -2.169 -2.776 1.457 H6 A1L0X 34 A1L0X H7 H7 H 0 1 N N N N N N 15.291 -12.187 -9.261 -6.306 3.480 -1.232 H7 A1L0X 35 A1L0X H8 H8 H 0 1 N N N N N N 18.907 -13.748 -4.923 -2.711 2.046 0.568 H8 A1L0X 36 A1L0X H9 H9 H 0 1 N N N N N N 19.892 -12.238 -8.793 -4.237 -1.954 0.407 H9 A1L0X 37 A1L0X H10 H10 H 0 1 N N N N N N 17.564 -13.094 -9.032 -4.232 2.657 -0.197 H10 A1L0X 38 A1L0X H11 H11 H 0 1 N N N N N N 14.248 -10.970 -7.399 -8.094 1.903 -1.835 H11 A1L0X 39 A1L0X H12 H12 H 0 1 N N N N N N 25.497 -15.547 -1.032 3.353 -2.474 -2.598 H12 A1L0X 40 A1L0X H13 H13 H 0 1 N N N N N N 21.904 -17.746 -3.316 2.545 -5.281 -0.221 H13 A1L0X 41 A1L0X H14 H14 H 0 1 N N N N N N 23.386 -18.204 -2.411 0.862 -5.075 -0.762 H14 A1L0X 42 A1L0X H15 H15 H 0 1 N N N N N N 22.219 -17.043 -1.693 2.205 -4.643 -1.847 H15 A1L0X 43 A1L0X H16 H16 H 0 1 N N N N N N 15.484 -10.656 -5.295 -7.823 -0.503 -1.398 H16 A1L0X 44 A1L0X H17 H17 H 0 1 N N N N N N 17.762 -11.549 -5.055 -5.757 -1.343 -0.359 H17 A1L0X 45 A1L0X H18 H18 H 0 1 N N N N N N 27.254 -12.226 -0.767 5.549 1.988 -0.389 H18 A1L0X 46 A1L0X H19 H19 H 0 1 N N N N N N 26.006 -14.773 -0.896 2.945 1.469 0.573 H19 A1L0X 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L0X C18 C17 DOUB Y N 1 A1L0X C18 C19 SING Y N 2 A1L0X C17 C16 SING Y N 3 A1L0X C14 C15 DOUB Y N 4 A1L0X C14 C13 SING Y N 5 A1L0X C15 C10 SING Y N 6 A1L0X C19 C20 DOUB Y N 7 A1L0X C16 C13 SING N N 8 A1L0X C16 C21 DOUB Y N 9 A1L0X C13 C12 DOUB Y N 10 A1L0X C10 C5 SING N N 11 A1L0X C10 C11 DOUB Y N 12 A1L0X C5 C2 SING N N 13 A1L0X C20 C21 SING Y N 14 A1L0X C12 C11 SING Y N 15 A1L0X C2 N2 DOUB Y N 16 A1L0X C2 N1 SING Y N 17 A1L0X N2 C3 SING Y N 18 A1L0X N1 C1 DOUB Y N 19 A1L0X O2 C6 DOUB N N 20 A1L0X C1 C9 SING N N 21 A1L0X C1 C4 SING Y N 22 A1L0X C3 C6 SING N N 23 A1L0X C3 C4 DOUB Y N 24 A1L0X C6 N3 SING N N 25 A1L0X C4 O1 SING N N 26 A1L0X N3 C7 SING N N 27 A1L0X C7 C8 SING N N 28 A1L0X C8 O4 DOUB N N 29 A1L0X C8 O3 SING N N 30 A1L0X C7 H1 SING N N 31 A1L0X C5 H2 SING N N 32 A1L0X C5 H3 SING N N 33 A1L0X O3 H4 SING N N 34 A1L0X C11 H5 SING N N 35 A1L0X C15 H6 SING N N 36 A1L0X C18 H7 SING N N 37 A1L0X C12 H8 SING N N 38 A1L0X C14 H9 SING N N 39 A1L0X C17 H10 SING N N 40 A1L0X C19 H11 SING N N 41 A1L0X O1 H12 SING N N 42 A1L0X C9 H13 SING N N 43 A1L0X C9 H14 SING N N 44 A1L0X C9 H15 SING N N 45 A1L0X C20 H16 SING N N 46 A1L0X C21 H17 SING N N 47 A1L0X C7 H18 SING N N 48 A1L0X N3 H19 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L0X InChI InChI 1.06 "InChI=1S/C21H19N3O4/c1-13-20(27)19(21(28)22-12-18(25)26)24-17(23-13)11-14-7-9-16(10-8-14)15-5-3-2-4-6-15/h2-10,27H,11-12H2,1H3,(H,22,28)(H,25,26)" A1L0X InChIKey InChI 1.06 RNJLQAHYMHEWME-UHFFFAOYSA-N A1L0X SMILES_CANONICAL CACTVS 3.385 "Cc1nc(Cc2ccc(cc2)c3ccccc3)nc(C(=O)NCC(O)=O)c1O" A1L0X SMILES CACTVS 3.385 "Cc1nc(Cc2ccc(cc2)c3ccccc3)nc(C(=O)NCC(O)=O)c1O" A1L0X SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(nc(n1)Cc2ccc(cc2)c3ccccc3)C(=O)NCC(=O)O)O" A1L0X SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(nc(n1)Cc2ccc(cc2)c3ccccc3)C(=O)NCC(=O)O)O" # _pdbx_chem_comp_identifier.comp_id A1L0X _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "2-[[6-methyl-5-oxidanyl-2-[(4-phenylphenyl)methyl]pyrimidin-4-yl]carbonylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L0X "Create component" 2024-04-19 PDBJ A1L0X "Initial release" 2025-02-26 RCSB #