data_A1L10 # _chem_comp.id A1L10 _chem_comp.name "1-[(4-fluorophenyl)methyl]-1-[(8~{S})-5-methyl-5-azaspiro[2.5]octan-8-yl]-3-[[4-(2-methylpropoxy)phenyl]methyl]urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H36 F N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-24 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 453.592 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L10 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZMF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L10 C1 C1 C 0 1 N N N N N N 37.784 29.641 53.694 3.747 -0.155 -1.926 C1 A1L10 1 A1L10 C2 C2 C 0 1 N N N N N N 37.594 30.121 57.055 1.490 1.442 0.294 C2 A1L10 2 A1L10 C3 C3 C 0 1 N N N N N N 38.474 31.684 55.303 0.471 1.425 -1.976 C3 A1L10 3 A1L10 C4 C4 C 0 1 N N N N N N 38.370 32.752 56.389 -0.199 2.746 -1.592 C4 A1L10 4 A1L10 C5 C5 C 0 1 N N N N N N 37.405 31.276 58.025 0.690 2.695 0.662 C5 A1L10 5 A1L10 C6 C6 C 0 1 Y N N N N N 38.487 29.295 52.397 4.679 -0.248 -0.746 C6 A1L10 6 A1L10 N1 N1 N 0 1 N N N N N N 37.208 32.513 57.262 -0.527 2.743 -0.162 N1 A1L10 7 A1L10 N2 N2 N 0 1 N N N N N N 39.036 27.101 54.264 0.349 -1.038 -0.835 N2 A1L10 8 A1L10 O1 O1 O 0 1 N N N N N N 35.749 22.599 57.046 -5.635 -0.770 1.034 O1 A1L10 9 A1L10 C7 C7 C 0 1 N N N N N N 39.297 28.158 55.027 1.629 -1.147 -1.242 C7 A1L10 10 A1L10 C8 C8 C 0 1 N N N N N N 39.659 25.821 54.534 -0.497 -2.231 -0.753 C8 A1L10 11 A1L10 C9 C9 C 0 1 Y N N N N N 38.624 24.956 55.207 -1.872 -1.840 -0.275 C9 A1L10 12 A1L10 C10 C10 C 0 1 Y N N N N N 37.645 24.333 54.445 -2.153 -1.824 1.079 C10 A1L10 13 A1L10 C11 C11 C 0 1 Y N N N N N 36.685 23.545 55.066 -3.413 -1.466 1.520 C11 A1L10 14 A1L10 C12 C12 C 0 1 Y N N N N N 36.703 23.381 56.447 -4.395 -1.122 0.603 C12 A1L10 15 A1L10 C13 C13 C 0 1 Y N N N N N 37.681 24.009 57.210 -4.110 -1.139 -0.755 C13 A1L10 16 A1L10 C14 C14 C 0 1 Y N N N N N 38.641 24.800 56.588 -2.848 -1.493 -1.190 C14 A1L10 17 A1L10 C15 C15 C 0 1 N N N N N N 34.932 21.766 56.227 -6.597 -0.428 0.034 C15 A1L10 18 A1L10 N N3 N 0 1 N N N N N N 38.596 29.284 54.860 2.366 -0.038 -1.450 N A1L10 19 A1L10 C C16 C 0 1 N N S N N N 38.615 30.298 55.924 1.787 1.284 -1.201 C A1L10 20 A1L10 O O2 O 0 1 N N N N N N 40.157 28.085 55.889 2.119 -2.245 -1.421 O A1L10 21 A1L10 C16 C17 C 0 1 N N N N N N 34.970 20.336 56.747 -7.922 -0.062 0.705 C16 A1L10 22 A1L10 C17 C18 C 0 1 N N N N N N 33.862 20.128 57.771 -7.738 1.207 1.539 C17 A1L10 23 A1L10 C18 C19 C 0 1 N N N N N N 34.825 19.350 55.594 -8.986 0.183 -0.367 C18 A1L10 24 A1L10 C19 C20 C 0 1 N N N N N N 36.371 29.251 56.817 1.240 0.174 1.107 C19 A1L10 25 A1L10 C20 C21 C 0 1 N N N N N N 37.505 28.748 57.708 2.545 0.953 1.285 C20 A1L10 26 A1L10 C21 C22 C 0 1 Y N N N N N 37.932 28.340 51.552 5.002 -1.483 -0.216 C21 A1L10 27 A1L10 C22 C23 C 0 1 Y N N N N N 38.565 28.005 50.362 5.857 -1.569 0.866 C22 A1L10 28 A1L10 C23 C24 C 0 1 Y N N N N N 39.761 28.621 50.019 6.391 -0.418 1.419 C23 A1L10 29 A1L10 C24 C25 C 0 1 Y N N N N N 40.320 29.573 50.864 6.067 0.819 0.887 C24 A1L10 30 A1L10 C25 C26 C 0 1 Y N N N N N 39.686 29.907 52.056 5.216 0.902 -0.198 C25 A1L10 31 A1L10 C26 C27 C 0 1 N N N N N N 37.065 33.623 58.213 -1.357 3.902 0.191 C26 A1L10 32 A1L10 F F1 F 0 1 N N N N N N 40.375 28.296 48.868 7.227 -0.501 2.477 F A1L10 33 A1L10 H11 H1 H 0 1 N N N N N N 37.586 30.723 53.715 4.001 0.722 -2.523 H11 A1L10 34 A1L10 H12 H2 H 0 1 N N N N N N 36.832 29.093 53.741 3.845 -1.051 -2.539 H12 A1L10 35 A1L10 H31 H3 H 0 1 N N N N N N 39.354 31.890 54.676 -0.189 0.595 -1.725 H31 A1L10 36 A1L10 H32 H4 H 0 1 N N N N N N 37.567 31.711 54.682 0.676 1.417 -3.046 H32 A1L10 37 A1L10 H42 H5 H 0 1 N N N N N N 39.286 32.735 56.998 0.478 3.572 -1.807 H42 A1L10 38 A1L10 H41 H6 H 0 1 N N N N N N 38.265 33.738 55.913 -1.114 2.869 -2.173 H41 A1L10 39 A1L10 H52 H7 H 0 1 N N N N N N 36.524 31.087 58.656 0.416 2.657 1.717 H52 A1L10 40 A1L10 H51 H8 H 0 1 N N N N N N 38.297 31.373 58.661 1.294 3.583 0.473 H51 A1L10 41 A1L10 HN2 H10 H 0 1 N N N N N N 38.403 27.190 53.495 -0.012 -0.170 -0.596 HN2 A1L10 42 A1L10 H82 H11 H 0 1 N N N N N N 39.986 25.355 53.593 -0.573 -2.692 -1.738 H82 A1L10 43 A1L10 H81 H12 H 0 1 N N N N N N 40.526 25.956 55.197 -0.058 -2.941 -0.053 H81 A1L10 44 A1L10 H10 H13 H 0 1 N N N N N N 37.630 24.461 53.373 -1.388 -2.092 1.792 H10 A1L10 45 A1L10 H110 H14 H 0 0 N N N N N N 35.923 23.058 54.475 -3.632 -1.454 2.577 H110 A1L10 46 A1L10 H13 H15 H 0 1 N N N N N N 37.695 23.883 58.283 -4.874 -0.872 -1.471 H13 A1L10 47 A1L10 H14 H16 H 0 1 N N N N N N 39.400 25.293 57.178 -2.625 -1.502 -2.247 H14 A1L10 48 A1L10 H151 H17 H 0 0 N N N N N N 33.896 22.135 56.249 -6.235 0.423 -0.543 H151 A1L10 49 A1L10 H152 H18 H 0 0 N N N N N N 35.308 21.789 55.193 -6.748 -1.279 -0.631 H152 A1L10 50 A1L10 H H19 H 0 1 N N N N N N 39.610 30.262 56.392 2.486 2.057 -1.522 H A1L10 51 A1L10 H16 H20 H 0 1 N N N N N N 35.940 20.165 57.237 -8.240 -0.880 1.352 H16 A1L10 52 A1L10 H173 H21 H 0 0 N N N N N N 33.895 19.093 58.143 -7.421 2.024 0.893 H173 A1L10 53 A1L10 H171 H22 H 0 0 N N N N N N 34.004 20.824 58.611 -8.683 1.467 2.018 H171 A1L10 54 A1L10 H172 H23 H 0 0 N N N N N N 32.887 20.317 57.299 -6.980 1.032 2.303 H172 A1L10 55 A1L10 H183 H24 H 0 0 N N N N N N 34.854 18.322 55.984 -9.117 -0.721 -0.962 H183 A1L10 56 A1L10 H181 H25 H 0 0 N N N N N N 33.866 19.521 55.084 -9.931 0.443 0.111 H181 A1L10 57 A1L10 H182 H26 H 0 0 N N N N N N 35.650 19.495 54.882 -8.669 1.000 -1.014 H182 A1L10 58 A1L10 H192 H27 H 0 0 N N N N N N 35.404 29.528 57.262 0.508 0.228 1.913 H192 A1L10 59 A1L10 H191 H28 H 0 0 N N N N N N 36.204 28.795 55.830 1.290 -0.780 0.581 H191 A1L10 60 A1L10 H202 H29 H 0 0 N N N N N N 38.155 27.931 57.363 3.454 0.513 0.876 H202 A1L10 61 A1L10 H201 H30 H 0 0 N N N N N N 37.356 28.664 58.795 2.671 1.520 2.207 H201 A1L10 62 A1L10 H21 H31 H 0 1 N N N N N N 37.005 27.857 51.822 4.585 -2.381 -0.648 H21 A1L10 63 A1L10 H22 H32 H 0 1 N N N N N N 38.128 27.267 49.705 6.108 -2.534 1.280 H22 A1L10 64 A1L10 H24 H33 H 0 1 N N N N N N 41.248 30.054 50.594 6.483 1.718 1.318 H24 A1L10 65 A1L10 H25 H34 H 0 1 N N N N N N 40.125 30.641 52.715 4.963 1.867 -0.613 H25 A1L10 66 A1L10 H261 H35 H 0 0 N N N N N N 36.196 33.440 58.863 -2.253 3.910 -0.430 H261 A1L10 67 A1L10 H262 H36 H 0 0 N N N N N N 37.974 33.698 58.828 -1.643 3.838 1.241 H262 A1L10 68 A1L10 H263 H37 H 0 0 N N N N N N 36.918 34.563 57.660 -0.791 4.819 0.024 H263 A1L10 69 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L10 F C23 SING N N 1 A1L10 C23 C22 DOUB Y N 2 A1L10 C23 C24 SING Y N 3 A1L10 C22 C21 SING Y N 4 A1L10 C21 C6 DOUB Y N 5 A1L10 C24 C25 DOUB Y N 6 A1L10 C25 C6 SING Y N 7 A1L10 C6 C1 SING N N 8 A1L10 C1 N SING N N 9 A1L10 N C SING N N 10 A1L10 N C7 SING N N 11 A1L10 C C3 SING N N 12 A1L10 C C2 SING N N 13 A1L10 C3 C4 SING N N 14 A1L10 C4 N1 SING N N 15 A1L10 C2 C20 SING N N 16 A1L10 C2 C19 SING N N 17 A1L10 C2 C5 SING N N 18 A1L10 C20 C19 SING N N 19 A1L10 C5 N1 SING N N 20 A1L10 N1 C26 SING N N 21 A1L10 C7 O DOUB N N 22 A1L10 C7 N2 SING N N 23 A1L10 N2 C8 SING N N 24 A1L10 C8 C9 SING N N 25 A1L10 C9 C14 SING Y N 26 A1L10 C9 C10 DOUB Y N 27 A1L10 C14 C13 DOUB Y N 28 A1L10 C13 C12 SING Y N 29 A1L10 C12 C11 DOUB Y N 30 A1L10 C12 O1 SING N N 31 A1L10 C11 C10 SING Y N 32 A1L10 O1 C15 SING N N 33 A1L10 C15 C16 SING N N 34 A1L10 C16 C18 SING N N 35 A1L10 C16 C17 SING N N 36 A1L10 C1 H11 SING N N 37 A1L10 C1 H12 SING N N 38 A1L10 C3 H31 SING N N 39 A1L10 C3 H32 SING N N 40 A1L10 C4 H42 SING N N 41 A1L10 C4 H41 SING N N 42 A1L10 C5 H52 SING N N 43 A1L10 C5 H51 SING N N 44 A1L10 N2 HN2 SING N N 45 A1L10 C8 H82 SING N N 46 A1L10 C8 H81 SING N N 47 A1L10 C10 H10 SING N N 48 A1L10 C11 H110 SING N N 49 A1L10 C13 H13 SING N N 50 A1L10 C14 H14 SING N N 51 A1L10 C15 H151 SING N N 52 A1L10 C15 H152 SING N N 53 A1L10 C H SING N N 54 A1L10 C16 H16 SING N N 55 A1L10 C17 H173 SING N N 56 A1L10 C17 H171 SING N N 57 A1L10 C17 H172 SING N N 58 A1L10 C18 H183 SING N N 59 A1L10 C18 H181 SING N N 60 A1L10 C18 H182 SING N N 61 A1L10 C19 H192 SING N N 62 A1L10 C19 H191 SING N N 63 A1L10 C20 H202 SING N N 64 A1L10 C20 H201 SING N N 65 A1L10 C21 H21 SING N N 66 A1L10 C22 H22 SING N N 67 A1L10 C24 H24 SING N N 68 A1L10 C25 H25 SING N N 69 A1L10 C26 H261 SING N N 70 A1L10 C26 H262 SING N N 71 A1L10 C26 H263 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L10 InChI InChI 1.06 "InChI=1S/C27H36FN3O2/c1-20(2)18-33-24-10-6-21(7-11-24)16-29-26(32)31(17-22-4-8-23(28)9-5-22)25-12-15-30(3)19-27(25)13-14-27/h4-11,20,25H,12-19H2,1-3H3,(H,29,32)" A1L10 InChIKey InChI 1.06 KQRKHYJZSCKWTF-UHFFFAOYSA-N A1L10 SMILES_CANONICAL CACTVS 3.385 "CC(C)COc1ccc(CNC(=O)N(Cc2ccc(F)cc2)[C@H]3CCN(C)CC34CC4)cc1" A1L10 SMILES CACTVS 3.385 "CC(C)COc1ccc(CNC(=O)N(Cc2ccc(F)cc2)[CH]3CCN(C)CC34CC4)cc1" A1L10 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)COc1ccc(cc1)CNC(=O)N(Cc2ccc(cc2)F)[C@H]3CCN(CC34CC4)C" A1L10 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)COc1ccc(cc1)CNC(=O)N(Cc2ccc(cc2)F)C3CCN(CC34CC4)C" # _pdbx_chem_comp_identifier.comp_id A1L10 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-[(4-fluorophenyl)methyl]-1-[(8~{S})-5-methyl-5-azaspiro[2.5]octan-8-yl]-3-[[4-(2-methylpropoxy)phenyl]methyl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L10 "Create component" 2024-05-24 PDBJ A1L10 "Initial release" 2024-08-28 RCSB #