data_A1L1R # _chem_comp.id A1L1R _chem_comp.name "~{N}-(7-methyl-1,8-naphthyridin-2-yl)-2-[[2-[(7-methyl-1,8-naphthyridin-2-yl)amino]-2-oxidanylidene-ethyl]amino]ethanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H21 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-09 _chem_comp.pdbx_modified_date 2025-04-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 415.448 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L1R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZD7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L1R C10 C1 C 0 1 N N N N N N 1.089 -2.331 4.473 -2.430 1.752 0.047 C10 A1L1R 1 A1L1R C14 C2 C 0 1 Y N N N N N 2.186 -4.374 0.308 4.783 1.471 -0.028 C14 A1L1R 2 A1L1R C13 C3 C 0 1 N N N N N N 3.376 -4.718 2.464 2.429 1.751 0.042 C13 A1L1R 3 A1L1R C12 C4 C 0 1 N N N N N N 3.623 -3.947 3.745 1.210 2.627 -0.093 C12 A1L1R 4 A1L1R C16 C5 C 0 1 Y N N N N N 0.785 -5.933 -0.887 7.165 1.263 0.015 C16 A1L1R 5 A1L1R C11 C6 C 0 1 N N N N N N 1.173 -3.832 4.275 -1.211 2.627 -0.090 C11 A1L1R 6 A1L1R N01 N1 N 0 1 Y N N N N N -0.059 1.704 0.262 -5.495 -1.991 -0.026 N01 A1L1R 7 A1L1R C06 C7 C 0 1 Y N N N N N 0.482 1.359 1.451 -5.671 -0.666 -0.022 C06 A1L1R 8 A1L1R C05 C8 C 0 1 Y N N N N N 1.229 2.287 2.198 -6.985 -0.135 -0.004 C05 A1L1R 9 A1L1R C04 C9 C 0 1 Y N N N N N 1.392 3.597 1.721 -8.080 -1.015 0.009 C04 A1L1R 10 A1L1R C03 C10 C 0 1 Y N N N N N 0.856 3.924 0.470 -7.828 -2.359 0.004 C03 A1L1R 11 A1L1R C02 C11 C 0 1 Y N N N N N 0.131 2.947 -0.223 -6.514 -2.817 -0.015 C02 A1L1R 12 A1L1R N02 N2 N 0 1 Y N N N N N 0.289 0.102 1.902 -4.623 0.164 -0.034 N02 A1L1R 13 A1L1R C09 C12 C 0 1 Y N N N N N 0.793 -0.271 3.097 -4.783 1.471 -0.029 C09 A1L1R 14 A1L1R C08 C13 C 0 1 Y N N N N N 1.554 0.601 3.891 -6.057 2.055 -0.011 C08 A1L1R 15 A1L1R C07 C14 C 0 1 Y N N N N N 1.790 1.901 3.423 -7.166 1.262 0.001 C07 A1L1R 16 A1L1R C01 C15 C 0 1 N N N N N N -0.511 3.263 -1.554 -6.255 -4.301 -0.021 C01 A1L1R 17 A1L1R N03 N3 N 0 1 N N N N N N 0.558 -1.611 3.473 -3.661 2.292 -0.041 N03 A1L1R 18 A1L1R O01 O1 O 0 1 N N N N N N 1.558 -1.882 5.514 -2.303 0.560 0.231 O01 A1L1R 19 A1L1R N04 N4 N 0 1 N N N N N N 2.524 -4.274 4.677 -0.001 1.805 0.036 N04 A1L1R 20 A1L1R N05 N5 N 0 1 N N N N N N 3.028 -4.008 1.381 3.661 2.292 -0.043 N05 A1L1R 21 A1L1R O02 O2 O 0 1 N N N N N N 3.461 -5.941 2.527 2.302 0.559 0.227 O02 A1L1R 22 A1L1R N06 N6 N 0 1 Y N N N N N 1.881 -3.385 -0.557 4.622 0.164 -0.038 N06 A1L1R 23 A1L1R C18 C16 C 0 1 Y N N N N N 1.062 -3.629 -1.600 5.671 -0.666 -0.024 C18 A1L1R 24 A1L1R C17 C17 C 0 1 Y N N N N N 0.501 -4.904 -1.795 6.984 -0.135 0.004 C17 A1L1R 25 A1L1R C15 C18 C 0 1 Y N N N N N 1.655 -5.666 0.180 6.056 2.056 -0.006 C15 A1L1R 26 A1L1R N07 N7 N 0 1 Y N N N N N 0.809 -2.622 -2.463 5.496 -1.991 -0.036 N07 A1L1R 27 A1L1R C21 C19 C 0 1 Y N N N N N -0.006 -2.833 -3.515 6.516 -2.816 -0.022 C21 A1L1R 28 A1L1R C20 C20 C 0 1 Y N N N N N -0.599 -4.075 -3.773 7.829 -2.358 0.005 C20 A1L1R 29 A1L1R C19 C21 C 0 1 Y N N N N N -0.345 -5.132 -2.891 8.080 -1.014 0.018 C19 A1L1R 30 A1L1R C22 C22 C 0 1 N N N N N N -0.235 -1.661 -4.443 6.258 -4.301 -0.036 C22 A1L1R 31 A1L1R H11 H1 H 0 1 N N N N N N 4.588 -4.244 4.182 1.219 3.385 0.690 H11 A1L1R 32 A1L1R H12 H2 H 0 1 N N N N N N 3.631 -2.867 3.538 1.218 3.112 -1.069 H12 A1L1R 33 A1L1R H15 H3 H 0 1 N N N N N N 0.343 -6.911 -1.006 8.155 1.694 0.032 H15 A1L1R 34 A1L1R H08 H4 H 0 1 N N N N N N 0.417 -4.333 4.897 -1.220 3.113 -1.066 H08 A1L1R 35 A1L1R H07 H5 H 0 1 N N N N N N 1.000 -4.079 3.217 -1.219 3.385 0.693 H07 A1L1R 36 A1L1R H03 H6 H 0 1 N N N N N N 1.919 4.336 2.306 -9.093 -0.640 0.024 H03 A1L1R 37 A1L1R H02 H7 H 0 1 N N N N N N 0.999 4.908 0.049 -8.646 -3.064 0.014 H02 A1L1R 38 A1L1R H05 H8 H 0 1 N N N N N N 1.949 0.277 4.842 -6.160 3.130 -0.007 H05 A1L1R 39 A1L1R H04 H9 H 0 1 N N N N N N 2.392 2.591 3.995 -8.156 1.693 0.015 H04 A1L1R 40 A1L1R H32 H10 H 0 1 N N N N N N -1.053 2.378 -1.920 -6.179 -4.661 1.006 H32 A1L1R 41 A1L1R H31 H11 H 0 1 N N N N N N -1.215 4.099 -1.432 -7.076 -4.812 -0.525 H31 A1L1R 42 A1L1R H33 H12 H 0 1 N N N N N N 0.267 3.542 -2.279 -5.322 -4.505 -0.547 H33 A1L1R 43 A1L1R H06 H13 H 0 1 N N N N N N -0.107 -2.099 2.907 -3.765 3.254 -0.114 H06 A1L1R 44 A1L1R H09 H14 H 0 1 N N N N N N 2.500 -5.268 4.784 -0.001 1.054 -0.639 H09 A1L1R 45 A1L1R H13 H16 H 0 1 N N N N N N 3.420 -3.090 1.325 3.764 3.253 -0.116 H13 A1L1R 46 A1L1R H14 H17 H 0 1 N N N N N N 1.911 -6.440 0.889 6.159 3.131 0.002 H14 A1L1R 47 A1L1R H17 H18 H 0 1 N N N N N N -1.238 -4.214 -4.633 8.648 -3.062 0.015 H17 A1L1R 48 A1L1R H16 H19 H 0 1 N N N N N N -0.791 -6.103 -3.051 9.093 -0.638 0.040 H16 A1L1R 49 A1L1R H42 H20 H 0 1 N N N N N N 0.332 -0.791 -4.082 6.214 -4.653 -1.066 H42 A1L1R 50 A1L1R H41 H21 H 0 1 N N N N N N 0.103 -1.924 -5.456 7.063 -4.814 0.490 H41 A1L1R 51 A1L1R H43 H22 H 0 1 N N N N N N -1.307 -1.416 -4.466 5.309 -4.509 0.460 H43 A1L1R 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L1R C22 C21 SING N N 1 A1L1R C20 C21 DOUB Y N 2 A1L1R C20 C19 SING Y N 3 A1L1R C21 N07 SING Y N 4 A1L1R C19 C17 DOUB Y N 5 A1L1R N07 C18 DOUB Y N 6 A1L1R C17 C18 SING Y N 7 A1L1R C17 C16 SING Y N 8 A1L1R C18 N06 SING Y N 9 A1L1R C01 C02 SING N N 10 A1L1R C16 C15 DOUB Y N 11 A1L1R N06 C14 DOUB Y N 12 A1L1R C02 N01 SING Y N 13 A1L1R C02 C03 DOUB Y N 14 A1L1R C15 C14 SING Y N 15 A1L1R N01 C06 DOUB Y N 16 A1L1R C14 N05 SING N N 17 A1L1R C03 C04 SING Y N 18 A1L1R N05 C13 SING N N 19 A1L1R C06 N02 SING Y N 20 A1L1R C06 C05 SING Y N 21 A1L1R C04 C05 DOUB Y N 22 A1L1R N02 C09 DOUB Y N 23 A1L1R C05 C07 SING Y N 24 A1L1R C13 O02 DOUB N N 25 A1L1R C13 C12 SING N N 26 A1L1R C09 N03 SING N N 27 A1L1R C09 C08 SING Y N 28 A1L1R C07 C08 DOUB Y N 29 A1L1R N03 C10 SING N N 30 A1L1R C12 N04 SING N N 31 A1L1R C11 C10 SING N N 32 A1L1R C11 N04 SING N N 33 A1L1R C10 O01 DOUB N N 34 A1L1R C12 H11 SING N N 35 A1L1R C12 H12 SING N N 36 A1L1R C16 H15 SING N N 37 A1L1R C11 H08 SING N N 38 A1L1R C11 H07 SING N N 39 A1L1R C04 H03 SING N N 40 A1L1R C03 H02 SING N N 41 A1L1R C08 H05 SING N N 42 A1L1R C07 H04 SING N N 43 A1L1R C01 H32 SING N N 44 A1L1R C01 H31 SING N N 45 A1L1R C01 H33 SING N N 46 A1L1R N03 H06 SING N N 47 A1L1R N04 H09 SING N N 48 A1L1R N05 H13 SING N N 49 A1L1R C15 H14 SING N N 50 A1L1R C20 H17 SING N N 51 A1L1R C19 H16 SING N N 52 A1L1R C22 H42 SING N N 53 A1L1R C22 H41 SING N N 54 A1L1R C22 H43 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L1R InChI InChI 1.06 "InChI=1S/C22H21N7O2/c1-13-3-5-15-7-9-17(28-21(15)24-13)26-19(30)11-23-12-20(31)27-18-10-8-16-6-4-14(2)25-22(16)29-18/h3-10,23H,11-12H2,1-2H3,(H,24,26,28,30)(H,25,27,29,31)" A1L1R InChIKey InChI 1.06 MZXAMJKGPGUUGY-UHFFFAOYSA-N A1L1R SMILES_CANONICAL CACTVS 3.385 "Cc1ccc2ccc(NC(=O)CNCC(=O)Nc3ccc4ccc(C)nc4n3)nc2n1" A1L1R SMILES CACTVS 3.385 "Cc1ccc2ccc(NC(=O)CNCC(=O)Nc3ccc4ccc(C)nc4n3)nc2n1" A1L1R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc2ccc(nc2n1)NC(=O)CNCC(=O)Nc3ccc4ccc(nc4n3)C" A1L1R SMILES "OpenEye OEToolkits" 2.0.7 "Cc1ccc2ccc(nc2n1)NC(=O)CNCC(=O)Nc3ccc4ccc(nc4n3)C" # _pdbx_chem_comp_identifier.comp_id A1L1R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(7-methyl-1,8-naphthyridin-2-yl)-2-[[2-[(7-methyl-1,8-naphthyridin-2-yl)amino]-2-oxidanylidene-ethyl]amino]ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L1R "Create component" 2024-05-09 PDBJ A1L1R "Initial release" 2025-04-30 RCSB #