data_A1L1U # _chem_comp.id A1L1U _chem_comp.name "Nocardicin G" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H19 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{R})-2-[(3~{S})-3-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-azetidin-1-yl]-2-(4-hydroxyphenyl)ethanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-14 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 385.371 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1L1U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZHV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1L1U C01 C1 C 0 1 N N S N N N 8.614 -27.794 -32.303 -3.333 -0.734 1.542 C01 A1L1U 1 A1L1U C03 C2 C 0 1 N N N N N N 7.708 -27.052 -31.311 -2.318 -1.528 0.762 C03 A1L1U 2 A1L1U C06 C3 C 0 1 N N S N N N 5.832 -25.342 -31.005 -0.149 -1.741 -0.329 C06 A1L1U 3 A1L1U C08 C4 C 0 1 N N N N N N 6.294 -23.714 -30.623 0.825 -0.871 -1.139 C08 A1L1U 4 A1L1U C0A C5 C 0 1 N N S N N N 4.087 -22.591 -31.946 3.324 -1.136 -0.183 C0A A1L1U 5 A1L1U C0C C6 C 0 1 N N N N N N 3.131 -22.135 -30.825 3.944 -1.424 -1.526 C0C A1L1U 6 A1L1U C0F C7 C 0 1 Y N N N N N 5.027 -21.422 -32.361 3.571 0.305 0.185 C0F A1L1U 7 A1L1U C0G C8 C 0 1 Y N N N N N 5.752 -21.473 -33.552 4.464 0.616 1.194 C0G A1L1U 8 A1L1U C0H C9 C 0 1 Y N N N N N 6.603 -20.411 -33.903 4.692 1.936 1.533 C0H A1L1U 9 A1L1U C0I C10 C 0 1 Y N N N N N 6.741 -19.290 -33.069 4.023 2.949 0.861 C0I A1L1U 10 A1L1U C0K C11 C 0 1 Y N N N N N 6.014 -19.232 -31.878 3.128 2.634 -0.151 C0K A1L1U 11 A1L1U C0M C12 C 0 1 Y N N N N N 5.169 -20.298 -31.539 2.908 1.313 -0.490 C0M A1L1U 12 A1L1U C0N C13 C 0 1 N N N N N N 4.811 -24.895 -31.648 1.053 -2.165 0.491 C0N A1L1U 13 A1L1U C0P C14 C 0 1 Y N N N N N 9.627 -26.809 -32.879 -4.075 0.188 0.609 C0P A1L1U 14 A1L1U C0Q C15 C 0 1 Y N N N N N 9.789 -26.717 -34.268 -3.722 1.523 0.533 C0Q A1L1U 15 A1L1U C0R C16 C 0 1 Y N N N N N 10.722 -25.834 -34.813 -4.400 2.371 -0.322 C0R A1L1U 16 A1L1U C0S C17 C 0 1 Y N N N N N 11.481 -25.036 -33.968 -5.435 1.881 -1.105 C0S A1L1U 17 A1L1U C0U C18 C 0 1 Y N N N N N 11.334 -25.101 -32.589 -5.787 0.542 -1.027 C0U A1L1U 18 A1L1U C0V C19 C 0 1 Y N N N N N 10.406 -25.987 -32.045 -5.103 -0.303 -0.175 C0V A1L1U 19 A1L1U N00 N1 N 0 1 N N N N N N 9.317 -28.905 -31.668 -4.286 -1.651 2.182 N00 A1L1U 20 A1L1U N05 N2 N 0 1 N N N N N N 6.740 -26.087 -31.850 -1.137 -0.970 0.430 N05 A1L1U 21 A1L1U N09 N3 N 0 1 N N N N N N 4.924 -23.704 -31.480 1.882 -1.383 -0.248 N09 A1L1U 22 A1L1U O04 O1 O 0 1 N N N N N N 7.792 -27.258 -30.139 -2.563 -2.669 0.433 O04 A1L1U 23 A1L1U O0D O2 O 0 1 N N N N N N 3.238 -22.585 -29.651 3.253 -1.798 -2.443 O0D A1L1U 24 A1L1U O0E O3 O 0 1 N N N N N N 2.220 -21.271 -31.040 5.266 -1.266 -1.703 O0E A1L1U 25 A1L1U O0J O4 O 0 1 N N N N N N 7.610 -18.238 -33.431 4.245 4.248 1.193 O0J A1L1U 26 A1L1U O0O O5 O 0 1 N N N N N N 3.974 -25.500 -32.245 1.212 -2.909 1.436 O0O A1L1U 27 A1L1U O0T O6 O 0 1 N N N N N N 12.401 -24.143 -34.541 -6.104 2.713 -1.946 O0T A1L1U 28 A1L1U H02 H1 H 0 1 N N N N N N 7.991 -28.177 -33.125 -2.826 -0.146 2.306 H02 A1L1U 29 A1L1U H07 H2 H 0 1 N N N N N N 5.604 -25.870 -30.067 -0.594 -2.553 -0.905 H07 A1L1U 30 A1L1U H10 H3 H 0 1 N N N N N N 6.251 -23.395 -29.571 0.936 -1.186 -2.176 H10 A1L1U 31 A1L1U H0Z H4 H 0 1 N N N N N N 7.203 -23.309 -31.092 0.646 0.199 -1.036 H0Z A1L1U 32 A1L1U H0B H5 H 0 1 N N N N N N 3.496 -22.902 -32.820 3.771 -1.785 0.570 H0B A1L1U 33 A1L1U H12 H6 H 0 1 N N N N N N 5.659 -22.329 -34.204 4.984 -0.173 1.717 H12 A1L1U 34 A1L1U H13 H7 H 0 1 N N N N N N 7.159 -20.458 -34.828 5.389 2.178 2.321 H13 A1L1U 35 A1L1U H15 H8 H 0 1 N N N N N N 6.102 -18.376 -31.226 2.606 3.421 -0.675 H15 A1L1U 36 A1L1U H16 H9 H 0 1 N N N N N N 4.611 -20.251 -30.616 2.214 1.067 -1.280 H16 A1L1U 37 A1L1U H17 H10 H 0 1 N N N N N N 9.188 -27.333 -34.920 -2.916 1.904 1.143 H17 A1L1U 38 A1L1U H18 H11 H 0 1 N N N N N N 10.852 -25.772 -35.883 -4.124 3.413 -0.380 H18 A1L1U 39 A1L1U H1A H12 H 0 1 N N N N N N 11.932 -24.472 -31.946 -6.593 0.159 -1.635 H1A A1L1U 40 A1L1U H1B H13 H 0 1 N N N N N N 10.284 -26.043 -30.973 -5.373 -1.347 -0.117 H1B A1L1U 41 A1L1U H0W H14 H 0 1 N N N N N N 9.896 -29.363 -32.343 -4.769 -2.208 1.494 H0W A1L1U 42 A1L1U H1 H15 H 0 1 N N N N N N 9.886 -28.557 -30.923 -3.823 -2.237 2.861 H1 A1L1U 43 A1L1U H0Y H17 H 0 1 N N N N N N 6.707 -25.939 -32.839 -0.941 -0.057 0.693 H0Y A1L1U 44 A1L1U H2 H18 H 0 1 N N N N N N 1.747 -21.101 -30.234 5.617 -1.463 -2.582 H2 A1L1U 45 A1L1U H14 H19 H 0 1 N N N N N N 7.586 -17.563 -32.763 4.964 4.663 0.698 H14 A1L1U 46 A1L1U H19 H20 H 0 1 N N N N N N 12.848 -23.664 -33.853 -5.722 2.766 -2.833 H19 A1L1U 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1L1U N00 C01 SING N N 1 A1L1U C01 C03 SING N N 2 A1L1U C03 O04 DOUB N N 3 A1L1U C03 N05 SING N N 4 A1L1U N05 C06 SING N N 5 A1L1U C06 C08 SING N N 6 A1L1U C08 N09 SING N N 7 A1L1U N09 C0A SING N N 8 A1L1U C0A C0C SING N N 9 A1L1U C0C O0D DOUB N N 10 A1L1U C0C O0E SING N N 11 A1L1U C0A C0F SING N N 12 A1L1U C0F C0G DOUB Y N 13 A1L1U C0G C0H SING Y N 14 A1L1U C0H C0I DOUB Y N 15 A1L1U C0I O0J SING N N 16 A1L1U C0I C0K SING Y N 17 A1L1U C0F C0M SING Y N 18 A1L1U C06 C0N SING N N 19 A1L1U C0N O0O DOUB N N 20 A1L1U C01 C0P SING N N 21 A1L1U C0P C0Q DOUB Y N 22 A1L1U C0Q C0R SING Y N 23 A1L1U C0R C0S DOUB Y N 24 A1L1U C0S O0T SING N N 25 A1L1U C0S C0U SING Y N 26 A1L1U C0P C0V SING Y N 27 A1L1U N09 C0N SING N N 28 A1L1U C0K C0M DOUB Y N 29 A1L1U C0U C0V DOUB Y N 30 A1L1U C01 H02 SING N N 31 A1L1U C06 H07 SING N N 32 A1L1U C08 H10 SING N N 33 A1L1U C08 H0Z SING N N 34 A1L1U C0A H0B SING N N 35 A1L1U C0G H12 SING N N 36 A1L1U C0H H13 SING N N 37 A1L1U C0K H15 SING N N 38 A1L1U C0M H16 SING N N 39 A1L1U C0Q H17 SING N N 40 A1L1U C0R H18 SING N N 41 A1L1U C0U H1A SING N N 42 A1L1U C0V H1B SING N N 43 A1L1U N00 H0W SING N N 44 A1L1U N00 H1 SING N N 45 A1L1U N05 H0Y SING N N 46 A1L1U O0E H2 SING N N 47 A1L1U O0J H14 SING N N 48 A1L1U O0T H19 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1L1U InChI InChI 1.06 "InChI=1S/C19H19N3O6/c20-15(10-1-5-12(23)6-2-10)17(25)21-14-9-22(18(14)26)16(19(27)28)11-3-7-13(24)8-4-11/h1-8,14-16,23-24H,9,20H2,(H,21,25)(H,27,28)/t14-,15-,16-/m0/s1" A1L1U InChIKey InChI 1.06 SAVAPYNOQXYBJS-JYJNAYRXSA-N A1L1U SMILES_CANONICAL CACTVS 3.385 "N[C@H](C(=O)N[C@H]1CN([C@H](C(O)=O)c2ccc(O)cc2)C1=O)c3ccc(O)cc3" A1L1U SMILES CACTVS 3.385 "N[CH](C(=O)N[CH]1CN([CH](C(O)=O)c2ccc(O)cc2)C1=O)c3ccc(O)cc3" A1L1U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[C@H](C(=O)N[C@H]2CN(C2=O)[C@H](c3ccc(cc3)O)C(=O)O)N)O" A1L1U SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(C(=O)NC2CN(C2=O)C(c3ccc(cc3)O)C(=O)O)N)O" # _pdbx_chem_comp_identifier.comp_id A1L1U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R})-2-[(3~{S})-3-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-azetidin-1-yl]-2-(4-hydroxyphenyl)ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1L1U "Create component" 2024-05-14 PDBJ A1L1U "Initial release" 2025-05-14 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1L1U _pdbx_chem_comp_synonyms.name "(2~{R})-2-[(3~{S})-3-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-2-oxidanylidene-azetidin-1-yl]-2-(4-hydroxyphenyl)ethanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #